Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00060

Experiment: TSB with Dermcidin 2 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00058 and MPMX26_00059 are separated by 0 nucleotidesMPMX26_00059 and MPMX26_00060 overlap by 1 nucleotidesMPMX26_00060 and MPMX26_00061 are separated by 30 nucleotides MPMX26_00058: MPMX26_00058 - N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase, at 63,812 to 64,954 _00058 MPMX26_00059: MPMX26_00059 - putative sugar transferase EpsL, at 64,955 to 65,563 _00059 MPMX26_00060: MPMX26_00060 - GDP-perosamine N-acetyltransferase, at 65,563 to 66,216 _00060 MPMX26_00061: MPMX26_00061 - GDP-perosamine synthase, at 66,247 to 67,422 _00061 Position (kb) 65 66 67Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 64.650 kb on + strand, within MPMX26_00058at 64.655 kb on + strand, within MPMX26_00058at 64.655 kb on + strand, within MPMX26_00058at 64.655 kb on + strand, within MPMX26_00058at 64.655 kb on + strand, within MPMX26_00058at 64.655 kb on + strand, within MPMX26_00058at 64.655 kb on + strand, within MPMX26_00058at 64.682 kb on + strand, within MPMX26_00058at 64.682 kb on + strand, within MPMX26_00058at 64.682 kb on + strand, within MPMX26_00058at 64.682 kb on + strand, within MPMX26_00058at 64.690 kb on - strand, within MPMX26_00058at 64.697 kb on + strand, within MPMX26_00058at 64.697 kb on + strand, within MPMX26_00058at 64.705 kb on + strand, within MPMX26_00058at 64.845 kb on + strandat 64.915 kb on + strandat 64.915 kb on + strandat 65.005 kb on + strandat 65.127 kb on + strand, within MPMX26_00059at 65.152 kb on + strand, within MPMX26_00059at 65.152 kb on + strand, within MPMX26_00059at 65.152 kb on + strand, within MPMX26_00059at 65.152 kb on + strand, within MPMX26_00059at 65.152 kb on + strand, within MPMX26_00059at 65.152 kb on + strand, within MPMX26_00059at 65.152 kb on + strand, within MPMX26_00059at 65.152 kb on + strand, within MPMX26_00059at 65.152 kb on + strand, within MPMX26_00059at 65.152 kb on + strand, within MPMX26_00059at 65.152 kb on + strand, within MPMX26_00059at 65.152 kb on + strand, within MPMX26_00059at 65.152 kb on + strand, within MPMX26_00059at 65.162 kb on + strand, within MPMX26_00059at 65.208 kb on + strand, within MPMX26_00059at 65.245 kb on + strand, within MPMX26_00059at 65.287 kb on + strand, within MPMX26_00059at 65.287 kb on + strand, within MPMX26_00059at 65.305 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.310 kb on + strand, within MPMX26_00059at 65.320 kb on + strand, within MPMX26_00059at 65.334 kb on + strand, within MPMX26_00059at 65.334 kb on + strand, within MPMX26_00059at 65.334 kb on + strand, within MPMX26_00059at 65.334 kb on + strand, within MPMX26_00059at 65.334 kb on + strand, within MPMX26_00059at 65.334 kb on + strand, within MPMX26_00059at 65.344 kb on + strand, within MPMX26_00059at 65.344 kb on + strand, within MPMX26_00059at 65.345 kb on + strand, within MPMX26_00059at 65.381 kb on + strand, within MPMX26_00059at 65.461 kb on + strand, within MPMX26_00059at 65.502 kb on + strand, within MPMX26_00059at 65.523 kb on + strandat 65.584 kb on + strandat 65.705 kb on + strand, within MPMX26_00060at 65.713 kb on + strand, within MPMX26_00060at 65.713 kb on + strand, within MPMX26_00060at 65.713 kb on + strand, within MPMX26_00060at 65.757 kb on + strand, within MPMX26_00060at 65.758 kb on + strand, within MPMX26_00060at 65.758 kb on + strand, within MPMX26_00060at 65.758 kb on + strand, within MPMX26_00060at 65.820 kb on + strand, within MPMX26_00060at 65.869 kb on + strand, within MPMX26_00060at 65.875 kb on + strand, within MPMX26_00060at 65.884 kb on + strand, within MPMX26_00060at 65.892 kb on + strand, within MPMX26_00060at 65.974 kb on + strand, within MPMX26_00060at 65.974 kb on + strand, within MPMX26_00060at 66.005 kb on + strand, within MPMX26_00060at 66.032 kb on + strand, within MPMX26_00060at 66.071 kb on + strand, within MPMX26_00060at 66.087 kb on + strand, within MPMX26_00060at 66.087 kb on + strand, within MPMX26_00060at 66.087 kb on + strand, within MPMX26_00060at 66.087 kb on + strand, within MPMX26_00060at 66.087 kb on + strand, within MPMX26_00060at 66.087 kb on + strand, within MPMX26_00060at 66.087 kb on + strand, within MPMX26_00060at 66.087 kb on + strand, within MPMX26_00060at 66.087 kb on + strand, within MPMX26_00060at 66.087 kb on + strand, within MPMX26_00060at 66.087 kb on + strand, within MPMX26_00060at 66.087 kb on + strand, within MPMX26_00060at 66.087 kb on + strand, within MPMX26_00060at 66.087 kb on + strand, within MPMX26_00060at 66.087 kb on + strand, within MPMX26_00060at 66.087 kb on + strand, within MPMX26_00060at 66.087 kb on + strand, within MPMX26_00060at 66.087 kb on + strand, within MPMX26_00060at 66.102 kb on + strand, within MPMX26_00060at 66.104 kb on + strand, within MPMX26_00060at 66.122 kb on + strand, within MPMX26_00060at 66.122 kb on + strand, within MPMX26_00060at 66.122 kb on + strand, within MPMX26_00060at 66.122 kb on + strand, within MPMX26_00060at 66.132 kb on + strand, within MPMX26_00060at 66.132 kb on + strand, within MPMX26_00060at 66.132 kb on + strand, within MPMX26_00060at 66.132 kb on + strand, within MPMX26_00060at 66.132 kb on + strand, within MPMX26_00060at 66.132 kb on + strand, within MPMX26_00060at 66.140 kb on + strand, within MPMX26_00060at 66.140 kb on + strand, within MPMX26_00060at 66.140 kb on + strand, within MPMX26_00060at 66.150 kb on + strand, within MPMX26_00060at 66.150 kb on + strand, within MPMX26_00060at 66.170 kb on + strandat 66.170 kb on + strandat 66.238 kb on + strandat 66.247 kb on + strandat 66.249 kb on + strandat 66.249 kb on + strandat 66.278 kb on + strandat 66.336 kb on + strandat 66.336 kb on + strandat 66.336 kb on + strandat 66.409 kb on + strand, within MPMX26_00061at 66.431 kb on + strand, within MPMX26_00061at 66.437 kb on + strand, within MPMX26_00061at 66.437 kb on + strand, within MPMX26_00061at 66.463 kb on + strand, within MPMX26_00061at 66.475 kb on + strand, within MPMX26_00061at 66.476 kb on + strand, within MPMX26_00061at 66.499 kb on + strand, within MPMX26_00061at 66.499 kb on + strand, within MPMX26_00061at 66.499 kb on + strand, within MPMX26_00061at 66.583 kb on + strand, within MPMX26_00061at 66.596 kb on + strand, within MPMX26_00061at 66.596 kb on + strand, within MPMX26_00061at 66.596 kb on + strand, within MPMX26_00061at 66.598 kb on + strand, within MPMX26_00061at 66.601 kb on + strand, within MPMX26_00061at 66.650 kb on + strand, within MPMX26_00061at 66.694 kb on + strand, within MPMX26_00061at 66.694 kb on + strand, within MPMX26_00061at 66.706 kb on + strand, within MPMX26_00061at 66.706 kb on + strand, within MPMX26_00061at 66.706 kb on + strand, within MPMX26_00061at 66.716 kb on + strand, within MPMX26_00061at 66.716 kb on + strand, within MPMX26_00061at 66.716 kb on + strand, within MPMX26_00061at 66.778 kb on + strand, within MPMX26_00061at 66.815 kb on + strand, within MPMX26_00061at 66.831 kb on + strand, within MPMX26_00061at 66.831 kb on + strand, within MPMX26_00061at 66.872 kb on + strand, within MPMX26_00061at 66.872 kb on + strand, within MPMX26_00061at 66.938 kb on + strand, within MPMX26_00061at 66.938 kb on + strand, within MPMX26_00061at 66.984 kb on + strand, within MPMX26_00061at 66.984 kb on + strand, within MPMX26_00061at 66.984 kb on + strand, within MPMX26_00061at 66.986 kb on + strand, within MPMX26_00061at 66.986 kb on + strand, within MPMX26_00061at 66.995 kb on + strand, within MPMX26_00061at 66.995 kb on + strand, within MPMX26_00061at 66.995 kb on + strand, within MPMX26_00061at 66.995 kb on + strand, within MPMX26_00061at 67.126 kb on + strand, within MPMX26_00061at 67.128 kb on + strand, within MPMX26_00061at 67.146 kb on + strand, within MPMX26_00061at 67.207 kb on + strand, within MPMX26_00061at 67.212 kb on + strand, within MPMX26_00061at 67.212 kb on + strand, within MPMX26_00061at 67.212 kb on + strand, within MPMX26_00061

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB with Dermcidin 2 ug/mL
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64,650 + MPMX26_00058 0.73 -1.2
64,655 + MPMX26_00058 0.74 -3.0
64,655 + MPMX26_00058 0.74 -1.4
64,655 + MPMX26_00058 0.74 +0.3
64,655 + MPMX26_00058 0.74 -1.8
64,655 + MPMX26_00058 0.74 -2.2
64,655 + MPMX26_00058 0.74 -1.5
64,682 + MPMX26_00058 0.76 -1.5
64,682 + MPMX26_00058 0.76 -1.8
64,682 + MPMX26_00058 0.76 +1.1
64,682 + MPMX26_00058 0.76 -0.5
64,690 - MPMX26_00058 0.77 +0.1
64,697 + MPMX26_00058 0.77 -0.3
64,697 + MPMX26_00058 0.77 -2.5
64,705 + MPMX26_00058 0.78 -0.8
64,845 + -1.2
64,915 + +0.6
64,915 + -3.0
65,005 + +0.3
65,127 + MPMX26_00059 0.28 +0.7
65,152 + MPMX26_00059 0.32 -1.4
65,152 + MPMX26_00059 0.32 -2.4
65,152 + MPMX26_00059 0.32 -1.3
65,152 + MPMX26_00059 0.32 -0.3
65,152 + MPMX26_00059 0.32 -0.9
65,152 + MPMX26_00059 0.32 -0.5
65,152 + MPMX26_00059 0.32 -0.7
65,152 + MPMX26_00059 0.32 -0.9
65,152 + MPMX26_00059 0.32 -0.4
65,152 + MPMX26_00059 0.32 +0.9
65,152 + MPMX26_00059 0.32 -1.2
65,152 + MPMX26_00059 0.32 +0.6
65,152 + MPMX26_00059 0.32 +1.3
65,162 + MPMX26_00059 0.34 -0.1
65,208 + MPMX26_00059 0.42 +0.9
65,245 + MPMX26_00059 0.48 +1.9
65,287 + MPMX26_00059 0.55 -0.5
65,287 + MPMX26_00059 0.55 +0.1
65,305 + MPMX26_00059 0.57 -1.8
65,310 + MPMX26_00059 0.58 -0.5
65,310 + MPMX26_00059 0.58 +0.3
65,310 + MPMX26_00059 0.58 -0.7
65,310 + MPMX26_00059 0.58 -1.3
65,310 + MPMX26_00059 0.58 +1.3
65,310 + MPMX26_00059 0.58 +0.1
65,310 + MPMX26_00059 0.58 -2.2
65,310 + MPMX26_00059 0.58 -0.1
65,310 + MPMX26_00059 0.58 +0.6
65,310 + MPMX26_00059 0.58 +1.5
65,310 + MPMX26_00059 0.58 +1.3
65,310 + MPMX26_00059 0.58 +0.3
65,310 + MPMX26_00059 0.58 -0.8
65,310 + MPMX26_00059 0.58 +1.9
65,310 + MPMX26_00059 0.58 -0.4
65,310 + MPMX26_00059 0.58 +1.3
65,310 + MPMX26_00059 0.58 -1.3
65,310 + MPMX26_00059 0.58 -0.1
65,310 + MPMX26_00059 0.58 -2.5
65,310 + MPMX26_00059 0.58 +0.1
65,310 + MPMX26_00059 0.58 +0.2
65,310 + MPMX26_00059 0.58 -1.1
65,310 + MPMX26_00059 0.58 -1.4
65,310 + MPMX26_00059 0.58 +1.6
65,320 + MPMX26_00059 0.60 -0.4
65,334 + MPMX26_00059 0.62 -0.5
65,334 + MPMX26_00059 0.62 -1.9
65,334 + MPMX26_00059 0.62 -0.5
65,334 + MPMX26_00059 0.62 -1.6
65,334 + MPMX26_00059 0.62 -0.5
65,334 + MPMX26_00059 0.62 -2.8
65,344 + MPMX26_00059 0.64 -1.0
65,344 + MPMX26_00059 0.64 -0.7
65,345 + MPMX26_00059 0.64 -0.4
65,381 + MPMX26_00059 0.70 -1.0
65,461 + MPMX26_00059 0.83 -2.0
65,502 + MPMX26_00059 0.90 -1.0
65,523 + -0.7
65,584 + -0.2
65,705 + MPMX26_00060 0.22 -2.8
65,713 + MPMX26_00060 0.23 +0.6
65,713 + MPMX26_00060 0.23 +1.0
65,713 + MPMX26_00060 0.23 -1.7
65,757 + MPMX26_00060 0.30 -0.9
65,758 + MPMX26_00060 0.30 -0.9
65,758 + MPMX26_00060 0.30 +2.3
65,758 + MPMX26_00060 0.30 -1.2
65,820 + MPMX26_00060 0.39 -0.8
65,869 + MPMX26_00060 0.47 +0.9
65,875 + MPMX26_00060 0.48 -1.3
65,884 + MPMX26_00060 0.49 -2.7
65,892 + MPMX26_00060 0.50 -0.9
65,974 + MPMX26_00060 0.63 -1.0
65,974 + MPMX26_00060 0.63 -1.3
66,005 + MPMX26_00060 0.68 -2.4
66,032 + MPMX26_00060 0.72 -0.1
66,071 + MPMX26_00060 0.78 -0.1
66,087 + MPMX26_00060 0.80 +0.6
66,087 + MPMX26_00060 0.80 -2.1
66,087 + MPMX26_00060 0.80 +0.4
66,087 + MPMX26_00060 0.80 -3.0
66,087 + MPMX26_00060 0.80 -0.3
66,087 + MPMX26_00060 0.80 -0.6
66,087 + MPMX26_00060 0.80 -1.1
66,087 + MPMX26_00060 0.80 -1.5
66,087 + MPMX26_00060 0.80 +2.9
66,087 + MPMX26_00060 0.80 -1.0
66,087 + MPMX26_00060 0.80 -0.5
66,087 + MPMX26_00060 0.80 -1.6
66,087 + MPMX26_00060 0.80 -0.6
66,087 + MPMX26_00060 0.80 +0.3
66,087 + MPMX26_00060 0.80 -0.5
66,087 + MPMX26_00060 0.80 -0.7
66,087 + MPMX26_00060 0.80 -1.5
66,087 + MPMX26_00060 0.80 -0.7
66,102 + MPMX26_00060 0.82 -1.7
66,104 + MPMX26_00060 0.83 -0.9
66,122 + MPMX26_00060 0.85 -1.3
66,122 + MPMX26_00060 0.85 -0.8
66,122 + MPMX26_00060 0.85 -1.7
66,122 + MPMX26_00060 0.85 +0.5
66,132 + MPMX26_00060 0.87 -0.7
66,132 + MPMX26_00060 0.87 +0.7
66,132 + MPMX26_00060 0.87 -0.9
66,132 + MPMX26_00060 0.87 -1.6
66,132 + MPMX26_00060 0.87 -1.3
66,132 + MPMX26_00060 0.87 -0.9
66,140 + MPMX26_00060 0.88 -1.7
66,140 + MPMX26_00060 0.88 -2.4
66,140 + MPMX26_00060 0.88 -0.8
66,150 + MPMX26_00060 0.90 +0.9
66,150 + MPMX26_00060 0.90 -0.3
66,170 + -3.7
66,170 + +0.3
66,238 + +0.8
66,247 + -0.3
66,249 + -0.5
66,249 + +0.3
66,278 + -1.8
66,336 + -0.5
66,336 + -0.2
66,336 + -1.7
66,409 + MPMX26_00061 0.14 +0.3
66,431 + MPMX26_00061 0.16 +1.6
66,437 + MPMX26_00061 0.16 +0.5
66,437 + MPMX26_00061 0.16 -0.7
66,463 + MPMX26_00061 0.18 -0.4
66,475 + MPMX26_00061 0.19 -1.4
66,476 + MPMX26_00061 0.19 +0.6
66,499 + MPMX26_00061 0.21 -2.1
66,499 + MPMX26_00061 0.21 +2.9
66,499 + MPMX26_00061 0.21 -1.0
66,583 + MPMX26_00061 0.29 -1.9
66,596 + MPMX26_00061 0.30 -2.0
66,596 + MPMX26_00061 0.30 +0.2
66,596 + MPMX26_00061 0.30 -0.1
66,598 + MPMX26_00061 0.30 -1.8
66,601 + MPMX26_00061 0.30 -2.3
66,650 + MPMX26_00061 0.34 +1.3
66,694 + MPMX26_00061 0.38 +0.9
66,694 + MPMX26_00061 0.38 -1.6
66,706 + MPMX26_00061 0.39 +1.9
66,706 + MPMX26_00061 0.39 +1.3
66,706 + MPMX26_00061 0.39 -2.4
66,716 + MPMX26_00061 0.40 -0.7
66,716 + MPMX26_00061 0.40 -1.6
66,716 + MPMX26_00061 0.40 -2.1
66,778 + MPMX26_00061 0.45 -2.6
66,815 + MPMX26_00061 0.48 -1.0
66,831 + MPMX26_00061 0.50 -1.2
66,831 + MPMX26_00061 0.50 +1.3
66,872 + MPMX26_00061 0.53 -2.2
66,872 + MPMX26_00061 0.53 -0.3
66,938 + MPMX26_00061 0.59 -1.0
66,938 + MPMX26_00061 0.59 -0.5
66,984 + MPMX26_00061 0.63 -3.5
66,984 + MPMX26_00061 0.63 -1.8
66,984 + MPMX26_00061 0.63 -0.2
66,986 + MPMX26_00061 0.63 -1.0
66,986 + MPMX26_00061 0.63 -0.4
66,995 + MPMX26_00061 0.64 +0.9
66,995 + MPMX26_00061 0.64 -0.5
66,995 + MPMX26_00061 0.64 -0.7
66,995 + MPMX26_00061 0.64 -0.4
67,126 + MPMX26_00061 0.75 -1.6
67,128 + MPMX26_00061 0.75 -2.1
67,146 + MPMX26_00061 0.76 -1.7
67,207 + MPMX26_00061 0.82 -0.7
67,212 + MPMX26_00061 0.82 -0.3
67,212 + MPMX26_00061 0.82 -3.2
67,212 + MPMX26_00061 0.82 -0.6

Or see this region's nucleotide sequence