Strain Fitness in Escherichia coli ECRC98 around JDDGAC_26150

Experiment: Control_ECRC98_WM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Control_ECRC98_WM
5,001,162	+	ptsI	JDDGAC_26140	0.87	-2.8
5,001,163	-	ptsI	JDDGAC_26140	0.87	-0.1
5,001,374	-				-0.5
5,001,402	-				-0.7
5,001,402	-				-0.7
5,001,709	-				+1.2
5,001,731	-				-1.8
5,001,810	+				+0.9
5,001,811	-				-1.6
5,001,859	-				+1.5
5,002,127	+				-0.0
5,002,127	+				-0.5
5,002,234	+	cysK	JDDGAC_26150	0.16	-1.9
5,002,246	+	cysK	JDDGAC_26150	0.17	-0.8
5,002,247	-	cysK	JDDGAC_26150	0.18	-1.1
5,002,361	-	cysK	JDDGAC_26150	0.29	+2.5
5,002,388	-	cysK	JDDGAC_26150	0.32	-1.7
5,002,453	+	cysK	JDDGAC_26150	0.39	-1.4
5,002,466	-	cysK	JDDGAC_26150	0.40	-2.3
5,002,480	+	cysK	JDDGAC_26150	0.42	-1.2
5,002,481	-	cysK	JDDGAC_26150	0.42	-1.5
5,002,535	+	cysK	JDDGAC_26150	0.47	-1.5
5,002,535	+	cysK	JDDGAC_26150	0.47	-1.6
5,002,536	-	cysK	JDDGAC_26150	0.47	-3.3
5,002,536	-	cysK	JDDGAC_26150	0.47	-4.2
5,002,536	-	cysK	JDDGAC_26150	0.47	-1.2
5,002,635	+	cysK	JDDGAC_26150	0.58	-0.9
5,002,636	-	cysK	JDDGAC_26150	0.58	-0.4
5,002,696	+	cysK	JDDGAC_26150	0.64	-1.3
5,002,727	+	cysK	JDDGAC_26150	0.67	-0.8
5,002,728	-	cysK	JDDGAC_26150	0.67	-2.9
5,002,809	-	cysK	JDDGAC_26150	0.75	-1.8
5,002,812	+	cysK	JDDGAC_26150	0.76	-1.2
5,002,813	-	cysK	JDDGAC_26150	0.76	-1.6
5,002,924	+	cysK	JDDGAC_26150	0.87	-1.9
5,002,925	-	cysK	JDDGAC_26150	0.87	-2.3
5,002,925	-	cysK	JDDGAC_26150	0.87	-2.1
5,002,925	-	cysK	JDDGAC_26150	0.87	-1.3
5,003,058	+				-1.1
5,003,059	-				+0.7
5,003,059	-				+1.0
5,003,059	-				-0.4
5,003,065	-				-0.3
5,003,086	+				-0.9
5,003,086	+				-1.4
5,003,087	-				+0.7
5,003,087	-				+1.0
5,003,091	+				+0.4
5,003,116	+				+0.4
5,003,133	+				-0.4
5,003,134	-				+0.0
5,003,182	+				+0.5
5,003,183	-				-0.6
5,003,183	-				+0.4
5,003,307	-				-1.5
5,003,437	+	cysZ	JDDGAC_26155	0.27	+1.5
5,003,458	-	cysZ	JDDGAC_26155	0.30	+0.1
5,003,538	+	cysZ	JDDGAC_26155	0.40	+0.4
5,003,538	+	cysZ	JDDGAC_26155	0.40	+0.5
5,003,539	-	cysZ	JDDGAC_26155	0.40	+1.1
5,003,640	-	cysZ	JDDGAC_26155	0.54	+0.6
5,003,640	-	cysZ	JDDGAC_26155	0.54	-0.7
5,003,705	+	cysZ	JDDGAC_26155	0.62	+1.0
5,003,725	+	cysZ	JDDGAC_26155	0.65	-0.3
5,003,736	+	cysZ	JDDGAC_26155	0.66	+1.1
5,003,788	-	cysZ	JDDGAC_26155	0.73	-0.6
5,003,788	-	cysZ	JDDGAC_26155	0.73	+0.3
5,003,803	+	cysZ	JDDGAC_26155	0.75	-0.1
5,003,804	-	cysZ	JDDGAC_26155	0.75	-1.1
5,003,876	+	cysZ	JDDGAC_26155	0.85	-0.3
5,003,876	+	cysZ	JDDGAC_26155	0.85	+0.7
5,003,892	+	cysZ	JDDGAC_26155	0.87	-1.0
5,003,953	+				-0.6
5,003,994	-				+1.1