Strain Fitness in Escherichia coli ECRC98 around JDDGAC_07600

Experiment: Control_ECRC98_WM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntJDDGAC_07595 and JDDGAC_07600 overlap by 4 nucleotidesJDDGAC_07600 and JDDGAC_07605 overlap by 4 nucleotides JDDGAC_07595: JDDGAC_07595 - phospholipase, at 1,313,458 to 1,314,528 _07595 JDDGAC_07600: JDDGAC_07600 - chemotaxis protein, at 1,314,525 to 1,315,430 _07600 JDDGAC_07605: JDDGAC_07605 - dGTPase, at 1,315,427 to 1,317,811 _07605 Position (kb) 1314 1315 1316Strain fitness (log2 ratio) -1 0 1 2at 1315.702 kb on + strand, within JDDGAC_07605at 1315.702 kb on + strand, within JDDGAC_07605at 1316.302 kb on - strand, within JDDGAC_07605

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_ECRC98_WM
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1,315,702 + JDDGAC_07605 0.12 +0.7
1,315,702 + JDDGAC_07605 0.12 +2.0
1,316,302 - JDDGAC_07605 0.37 -0.6

Or see this region's nucleotide sequence