Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02305

Experiment: TSB with Dermcidin 1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 1 ug/mL
2,375,989	-		MPMX26_02304	0.53	+0.0
2,376,003	-		MPMX26_02304	0.54	-1.1
2,376,009	-		MPMX26_02304	0.54	+0.2
2,376,009	-		MPMX26_02304	0.54	+0.4
2,376,010	-		MPMX26_02304	0.54	-0.3
2,376,020	-		MPMX26_02304	0.55	+0.8
2,376,053	-		MPMX26_02304	0.57	+0.2
2,376,053	-		MPMX26_02304	0.57	-0.5
2,376,053	-		MPMX26_02304	0.57	+0.0
2,376,063	-		MPMX26_02304	0.58	+0.0
2,376,102	-		MPMX26_02304	0.61	-0.1
2,376,104	-		MPMX26_02304	0.61	-1.8
2,376,106	-		MPMX26_02304	0.61	-0.2
2,376,106	-		MPMX26_02304	0.61	+0.5
2,376,126	-		MPMX26_02304	0.63	+1.0
2,376,185	-		MPMX26_02304	0.67	-0.3
2,376,209	-		MPMX26_02304	0.69	+0.4
2,376,241	-		MPMX26_02304	0.71	-0.4
2,376,246	-		MPMX26_02304	0.72	+0.1
2,376,251	-		MPMX26_02304	0.72	+0.0
2,376,251	-		MPMX26_02304	0.72	+0.3
2,376,258	-		MPMX26_02304	0.73	-0.2
2,376,264	-		MPMX26_02304	0.73	-1.0
2,376,301	-		MPMX26_02304	0.76	-0.6
2,376,360	-		MPMX26_02304	0.80	-0.9
2,376,405	-		MPMX26_02304	0.83	-2.0
2,376,415	-		MPMX26_02304	0.84	-0.6
2,376,415	-		MPMX26_02304	0.84	-0.6
2,376,430	-		MPMX26_02304	0.85	+0.5
2,376,449	-		MPMX26_02304	0.87	+0.5
2,376,449	-		MPMX26_02304	0.87	-0.4
2,376,454	-		MPMX26_02304	0.87	-0.2
2,376,454	-		MPMX26_02304	0.87	+0.1
2,376,463	-		MPMX26_02304	0.88	+0.3
2,376,496	-				+0.6
2,376,496	-				-0.1
2,376,499	-				+0.0
2,376,539	-				-0.2
2,376,550	-				-0.5
2,376,550	-				+0.3
2,376,550	-				+0.0
2,376,577	-				-0.2
2,376,580	-				+0.3
2,376,591	-				+1.8
2,376,623	-				-1.3
2,376,948	+				-0.4
2,376,948	+				+0.3
2,377,006	+				-0.2
2,377,051	+		MPMX26_02305	0.11	+1.2
2,377,058	+		MPMX26_02305	0.12	-0.6
2,377,063	+		MPMX26_02305	0.13	+0.1
2,377,063	+		MPMX26_02305	0.13	+0.4
2,377,252	+		MPMX26_02305	0.36	-1.1
2,377,271	+		MPMX26_02305	0.39	-0.5
2,377,271	+		MPMX26_02305	0.39	-0.2
2,377,276	+		MPMX26_02305	0.39	-0.3
2,377,280	+		MPMX26_02305	0.40	+0.0
2,377,280	+		MPMX26_02305	0.40	-1.0
2,377,290	+		MPMX26_02305	0.41	-0.4
2,377,300	+		MPMX26_02305	0.42	-0.7
2,377,310	+		MPMX26_02305	0.43	-0.2
2,377,310	+		MPMX26_02305	0.43	-1.9
2,377,321	+		MPMX26_02305	0.45	-0.2
2,377,321	+		MPMX26_02305	0.45	-0.6
2,377,321	+		MPMX26_02305	0.45	+1.0
2,377,321	+		MPMX26_02305	0.45	+1.0
2,377,321	+		MPMX26_02305	0.45	-1.2
2,377,321	+		MPMX26_02305	0.45	-0.2
2,377,321	+		MPMX26_02305	0.45	-0.1
2,377,321	+		MPMX26_02305	0.45	-1.6
2,377,321	+		MPMX26_02305	0.45	-0.4
2,377,321	+		MPMX26_02305	0.45	+0.4
2,377,324	+		MPMX26_02305	0.45	-2.2
2,377,346	+		MPMX26_02305	0.48	-1.6
2,377,378	+		MPMX26_02305	0.52	-0.9
2,377,378	+		MPMX26_02305	0.52	-1.6
2,377,388	+		MPMX26_02305	0.53	-1.3
2,377,388	+		MPMX26_02305	0.53	-1.3
2,377,388	+		MPMX26_02305	0.53	+0.3
2,377,388	+		MPMX26_02305	0.53	-1.9
2,377,393	+		MPMX26_02305	0.54	+0.4
2,377,393	+		MPMX26_02305	0.54	+0.6
2,377,394	+		MPMX26_02305	0.54	-1.0
2,377,459	+		MPMX26_02305	0.62	-0.3
2,377,459	+		MPMX26_02305	0.62	+2.0
2,377,459	+		MPMX26_02305	0.62	+0.1
2,377,459	+		MPMX26_02305	0.62	+0.4
2,377,497	+		MPMX26_02305	0.67	+0.8
2,377,505	-		MPMX26_02305	0.68	-0.2
2,377,562	+		MPMX26_02305	0.75	-1.0
2,377,562	+		MPMX26_02305	0.75	-1.2
2,377,588	+		MPMX26_02305	0.78	-0.5
2,377,589	+		MPMX26_02305	0.78	-2.7
2,377,589	+		MPMX26_02305	0.78	+0.0
2,377,598	+		MPMX26_02305	0.79	-0.8
2,377,598	+		MPMX26_02305	0.79	+1.0
2,377,598	+		MPMX26_02305	0.79	+1.0
2,377,598	+		MPMX26_02305	0.79	-0.0
2,377,598	+		MPMX26_02305	0.79	+0.9
2,377,598	+		MPMX26_02305	0.79	+0.0
2,377,598	+		MPMX26_02305	0.79	-0.9
2,377,598	+		MPMX26_02305	0.79	-1.7
2,377,621	+		MPMX26_02305	0.82	-1.1
2,377,678	+		MPMX26_02305	0.89	-1.4
2,377,742	+				+0.4
2,377,753	+				-0.4
2,377,806	+				-0.0
2,377,826	+				-0.5
2,377,836	+		MPMX26_02306	0.11	+0.4
2,377,841	+		MPMX26_02306	0.11	+1.0
2,377,842	+		MPMX26_02306	0.12	+0.0
2,377,848	+		MPMX26_02306	0.12	+0.3
2,377,914	+		MPMX26_02306	0.22	-1.3
2,377,914	+		MPMX26_02306	0.22	+0.1
2,377,914	+		MPMX26_02306	0.22	-0.7
2,377,914	+		MPMX26_02306	0.22	-0.7
2,377,962	+		MPMX26_02306	0.28	-0.3
2,377,962	+		MPMX26_02306	0.28	+0.3
2,377,962	+		MPMX26_02306	0.28	-0.2
2,377,993	+		MPMX26_02306	0.33	-0.5
2,378,111	+		MPMX26_02306	0.49	+0.4
2,378,121	+		MPMX26_02306	0.50	+0.3
2,378,127	+		MPMX26_02306	0.51	-0.8
2,378,128	+		MPMX26_02306	0.51	-0.4
2,378,137	+		MPMX26_02306	0.53	+0.3
2,378,137	+		MPMX26_02306	0.53	-0.6
2,378,137	+		MPMX26_02306	0.53	+0.9
2,378,137	+		MPMX26_02306	0.53	-0.7
2,378,137	+		MPMX26_02306	0.53	-0.4
2,378,137	+		MPMX26_02306	0.53	-0.1
2,378,137	+		MPMX26_02306	0.53	-0.6
2,378,137	+		MPMX26_02306	0.53	-0.0
2,378,138	+		MPMX26_02306	0.53	+0.0
2,378,145	+		MPMX26_02306	0.54	-0.0
2,378,145	+		MPMX26_02306	0.54	+0.2
2,378,145	-		MPMX26_02306	0.54	+0.4
2,378,159	+		MPMX26_02306	0.56	+0.6
2,378,159	+		MPMX26_02306	0.56	-0.5
2,378,159	+		MPMX26_02306	0.56	-0.6
2,378,159	+		MPMX26_02306	0.56	-0.2
2,378,159	+		MPMX26_02306	0.56	+2.6
2,378,161	+		MPMX26_02306	0.56	-0.6
2,378,161	+		MPMX26_02306	0.56	+0.0
2,378,161	+		MPMX26_02306	0.56	-0.6
2,378,164	+		MPMX26_02306	0.56	-0.3
2,378,164	+		MPMX26_02306	0.56	+0.1
2,378,166	+		MPMX26_02306	0.57	+0.2
2,378,166	+		MPMX26_02306	0.57	+0.4
2,378,166	+		MPMX26_02306	0.57	-0.8
2,378,237	+		MPMX26_02306	0.67	+0.1
2,378,253	+		MPMX26_02306	0.69	+0.2
2,378,341	+		MPMX26_02306	0.81	+0.4
2,378,341	+		MPMX26_02306	0.81	-0.2
2,378,341	+		MPMX26_02306	0.81	+0.2
2,378,341	+		MPMX26_02306	0.81	-0.7
2,378,341	+		MPMX26_02306	0.81	+0.5
2,378,341	+		MPMX26_02306	0.81	-0.3
2,378,341	+		MPMX26_02306	0.81	+0.1
2,378,341	+		MPMX26_02306	0.81	-1.1
2,378,346	+		MPMX26_02306	0.82	-1.1
2,378,346	+		MPMX26_02306	0.82	-0.1
2,378,372	+		MPMX26_02306	0.85	+0.6
2,378,383	+		MPMX26_02306	0.87	-0.4
2,378,412	+				-0.1
2,378,412	+				-0.6
2,378,419	+				-1.4
2,378,421	+				+0.0
2,378,426	+				+0.6
2,378,426	+				-0.3
2,378,431	+				-0.9
2,378,431	+				+0.1
2,378,431	+				+1.3
2,378,431	+				+0.3
2,378,436	+				+0.4
2,378,437	+				-0.2
2,378,439	-				-1.6
2,378,444	-				-0.3
2,378,520	-		MPMX26_02307	0.20	+0.0
2,378,525	-		MPMX26_02307	0.23	-0.7
2,378,544	-		MPMX26_02307	0.33	+0.1
2,378,544	-		MPMX26_02307	0.33	-0.1
2,378,570	-		MPMX26_02307	0.47	+0.0
2,378,615	-		MPMX26_02307	0.71	-0.9
2,378,678	-				+0.9
2,378,678	-				+1.2
2,378,683	-				+0.1
2,378,683	-				+0.1
2,378,685	-				-0.8
2,378,685	-				-0.3
2,378,685	-				-0.5
2,378,685	-				+0.9
2,378,685	-				+0.3
2,378,685	-				+0.1