Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02164

Experiment: TSB with Dermcidin 1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 1 ug/mL
2,218,774	+		MPMX26_02162	0.80	+1.4
2,218,774	+		MPMX26_02162	0.80	+0.2
2,218,774	+		MPMX26_02162	0.80	+0.8
2,218,794	+		MPMX26_02162	0.81	-0.4
2,218,799	+		MPMX26_02162	0.81	+0.4
2,218,915	+		MPMX26_02162	0.89	+1.2
2,218,943	+				-0.7
2,218,943	+				-1.4
2,218,943	+				-0.0
2,218,943	+				-0.6
2,218,943	+				+0.5
2,218,943	+				-0.5
2,218,951	+				-0.4
2,218,970	+				-0.6
2,218,979	+				-0.7
2,218,979	+				+0.4
2,219,033	+				+1.6
2,219,084	+				+0.0
2,219,091	-				+0.2
2,219,091	-				+0.0
2,219,096	-				-0.1
2,219,112	-				+2.0
2,219,786	-				-1.0
2,219,791	-				-0.4
2,219,791	-				-1.5
2,219,796	-				+0.1
2,219,796	-				-0.2
2,219,796	-				-0.0
2,219,796	-				+0.3
2,219,806	-				+2.2
2,219,806	-				-0.7
2,219,806	-				-0.1
2,219,806	-				+0.2
2,219,806	-				-0.4
2,219,806	-				-0.2
2,219,806	-				-0.5
2,219,806	-				-1.1
2,219,806	-				-2.2
2,219,806	-				-0.2
2,219,836	-				-0.3
2,219,975	-		MPMX26_02164	0.21	-1.0
2,219,975	-		MPMX26_02164	0.21	-0.3
2,219,975	-		MPMX26_02164	0.21	-0.1
2,219,975	-		MPMX26_02164	0.21	-1.4
2,219,975	-		MPMX26_02164	0.21	-0.5
2,220,005	-		MPMX26_02164	0.24	-0.8
2,220,005	-		MPMX26_02164	0.24	+0.2
2,220,062	-		MPMX26_02164	0.30	-1.4
2,220,097	-		MPMX26_02164	0.33	-2.0
2,220,143	-		MPMX26_02164	0.37	+1.2
2,220,143	-		MPMX26_02164	0.37	+0.4
2,220,148	-		MPMX26_02164	0.38	-1.2
2,220,175	-		MPMX26_02164	0.40	-0.6
2,220,193	-		MPMX26_02164	0.42	+0.7
2,220,203	-		MPMX26_02164	0.43	-0.3
2,220,203	-		MPMX26_02164	0.43	-0.2
2,220,208	-		MPMX26_02164	0.44	+0.2
2,220,230	-		MPMX26_02164	0.46	-1.3
2,220,230	-		MPMX26_02164	0.46	-0.4
2,220,904	-		MPMX26_02165	0.13	+0.2
2,220,904	-		MPMX26_02165	0.13	+0.1
2,221,000	-		MPMX26_02165	0.25	+0.7
2,221,034	-		MPMX26_02165	0.29	-0.7
2,221,114	-		MPMX26_02165	0.39	+0.9
2,221,124	-		MPMX26_02165	0.40	-1.2
2,221,142	-		MPMX26_02165	0.42	+3.0
2,221,142	-		MPMX26_02165	0.42	-1.6
2,221,142	-		MPMX26_02165	0.42	-0.5
2,221,142	-		MPMX26_02165	0.42	+0.6
2,221,183	-		MPMX26_02165	0.47	+2.2
2,221,225	-		MPMX26_02165	0.52	-0.6
2,221,225	-		MPMX26_02165	0.52	+0.1
2,221,295	-		MPMX26_02165	0.61	-0.2
2,221,337	-		MPMX26_02165	0.66	+0.0
2,221,337	-		MPMX26_02165	0.66	+2.0
2,221,337	-		MPMX26_02165	0.66	+2.9
2,221,345	-		MPMX26_02165	0.67	+0.0
2,221,345	-		MPMX26_02165	0.67	-0.7
2,221,550	-				+1.3