Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02105

Experiment: TSB with Dermcidin 1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 1 ug/mL
2,158,321	+		MPMX26_02103	0.76	-0.4
2,158,321	+		MPMX26_02103	0.76	+0.0
2,158,330	+		MPMX26_02103	0.76	+3.6
2,158,432	+		MPMX26_02103	0.87	+2.0
2,158,432	+		MPMX26_02103	0.87	+2.2
2,158,432	+		MPMX26_02103	0.87	+1.4
2,158,432	+		MPMX26_02103	0.87	+0.4
2,158,472	+				-0.5
2,158,614	+				-0.0
2,158,614	+				-2.0
2,158,621	+				-0.2
2,158,626	+		MPMX26_02104	0.10	-0.4
2,158,632	+		MPMX26_02104	0.11	+0.0
2,158,632	+		MPMX26_02104	0.11	-0.4
2,158,699	+		MPMX26_02104	0.20	+0.1
2,158,712	+		MPMX26_02104	0.21	+0.4
2,158,727	+		MPMX26_02104	0.23	+0.6
2,158,746	+		MPMX26_02104	0.26	-0.2
2,158,780	+		MPMX26_02104	0.30	+0.6
2,158,841	+		MPMX26_02104	0.38	+0.3
2,158,854	+		MPMX26_02104	0.40	-0.0
2,158,888	+		MPMX26_02104	0.44	+0.4
2,158,898	+		MPMX26_02104	0.45	+0.1
2,158,900	+		MPMX26_02104	0.46	+0.5
2,158,900	+		MPMX26_02104	0.46	-0.3
2,158,900	+		MPMX26_02104	0.46	-0.8
2,158,905	+		MPMX26_02104	0.46	+0.4
2,158,905	+		MPMX26_02104	0.46	-0.5
2,158,905	+		MPMX26_02104	0.46	-0.5
2,158,910	+		MPMX26_02104	0.47	-0.5
2,158,945	+		MPMX26_02104	0.52	-0.9
2,158,945	+		MPMX26_02104	0.52	-1.2
2,158,945	+		MPMX26_02104	0.52	-0.6
2,158,950	+		MPMX26_02104	0.52	-0.7
2,159,001	+		MPMX26_02104	0.59	-0.8
2,159,001	+		MPMX26_02104	0.59	+0.2
2,159,097	+		MPMX26_02104	0.71	+0.8
2,159,097	+		MPMX26_02104	0.71	+0.2
2,159,101	+		MPMX26_02104	0.72	+0.3
2,159,104	+		MPMX26_02104	0.72	+0.2
2,159,152	+		MPMX26_02104	0.78	-0.8
2,159,178	+		MPMX26_02104	0.82	-0.2
2,159,248	+				-0.6
2,159,248	+				+0.7
2,159,248	+				-0.1
2,159,253	+				-0.0
2,159,253	+				-0.3
2,159,263	+				+0.2
2,159,310	+				-0.2
2,159,320	+				+0.3
2,159,405	+		MPMX26_02105	0.11	-2.0
2,159,405	+		MPMX26_02105	0.11	-0.2
2,159,405	+		MPMX26_02105	0.11	-0.1
2,159,405	+		MPMX26_02105	0.11	+1.0
2,159,415	+		MPMX26_02105	0.12	-1.8
2,159,415	+		MPMX26_02105	0.12	+0.6
2,159,415	+		MPMX26_02105	0.12	-1.6
2,159,415	+		MPMX26_02105	0.12	-1.9
2,159,426	+		MPMX26_02105	0.14	-1.3
2,159,445	+		MPMX26_02105	0.16	-2.7
2,159,445	+		MPMX26_02105	0.16	-1.6
2,159,445	+		MPMX26_02105	0.16	-0.4
2,159,445	+		MPMX26_02105	0.16	-0.9
2,159,445	+		MPMX26_02105	0.16	-1.3
2,159,445	+		MPMX26_02105	0.16	-2.4
2,159,445	+		MPMX26_02105	0.16	-2.3
2,159,445	+		MPMX26_02105	0.16	-1.5
2,159,445	+		MPMX26_02105	0.16	-1.2
2,159,445	+		MPMX26_02105	0.16	-2.5
2,159,445	+		MPMX26_02105	0.16	-1.2
2,159,499	+		MPMX26_02105	0.23	-1.3
2,159,519	+		MPMX26_02105	0.25	-0.9
2,159,717	+		MPMX26_02105	0.49	-0.6
2,159,783	+		MPMX26_02105	0.57	-0.9
2,159,785	+		MPMX26_02105	0.58	-1.0
2,159,785	+		MPMX26_02105	0.58	-0.2
2,159,785	+		MPMX26_02105	0.58	-0.4
2,159,785	+		MPMX26_02105	0.58	-2.3
2,159,785	+		MPMX26_02105	0.58	+0.4
2,159,919	+		MPMX26_02105	0.74	-0.9
2,159,919	+		MPMX26_02105	0.74	-1.1
2,159,948	+		MPMX26_02105	0.78	-1.1
2,159,949	+		MPMX26_02105	0.78	-0.2
2,159,976	+		MPMX26_02105	0.81	+0.6
2,159,991	+		MPMX26_02105	0.83	+1.0
2,160,037	+		MPMX26_02105	0.89	-1.7
2,160,049	+				-0.9
2,160,084	+				-0.7
2,160,084	+				-0.2
2,160,177	+				+0.3
2,160,177	+				+0.6
2,160,237	+		MPMX26_02106	0.13	-0.4
2,160,237	+		MPMX26_02106	0.13	+0.0
2,160,237	+		MPMX26_02106	0.13	+0.0
2,160,237	+		MPMX26_02106	0.13	+0.5
2,160,237	+		MPMX26_02106	0.13	+0.1
2,160,336	+		MPMX26_02106	0.28	-0.3
2,160,336	+		MPMX26_02106	0.28	-0.6
2,160,361	+		MPMX26_02106	0.32	-1.0
2,160,365	+		MPMX26_02106	0.32	+0.9
2,160,365	+		MPMX26_02106	0.32	-0.3
2,160,400	+		MPMX26_02106	0.38	-0.4
2,160,427	+		MPMX26_02106	0.42	-0.8
2,160,427	+		MPMX26_02106	0.42	+0.7
2,160,462	+		MPMX26_02106	0.47	+0.5
2,160,462	+		MPMX26_02106	0.47	+0.6
2,160,462	+		MPMX26_02106	0.47	-0.3
2,160,462	+		MPMX26_02106	0.47	+0.1
2,160,483	+		MPMX26_02106	0.51	-0.8
2,160,483	+		MPMX26_02106	0.51	-0.7
2,160,562	+		MPMX26_02106	0.63	-0.7
2,160,562	+		MPMX26_02106	0.63	-0.5
2,160,572	+		MPMX26_02106	0.64	-0.5
2,160,572	+		MPMX26_02106	0.64	-0.9
2,160,572	+		MPMX26_02106	0.64	+0.2
2,160,577	+		MPMX26_02106	0.65	-0.4
2,160,598	+		MPMX26_02106	0.68	-2.3
2,160,600	+		MPMX26_02106	0.69	+0.8
2,160,647	+		MPMX26_02106	0.76	-1.3
2,160,647	+		MPMX26_02106	0.76	-0.5
2,160,669	+		MPMX26_02106	0.79	-1.0
2,160,691	+		MPMX26_02106	0.82	-0.0
2,160,692	+		MPMX26_02106	0.83	+0.2
2,160,702	+		MPMX26_02106	0.84	+0.4
2,160,702	+		MPMX26_02106	0.84	+0.4
2,160,702	+		MPMX26_02106	0.84	-0.2
2,160,702	+		MPMX26_02106	0.84	-0.0
2,160,702	+		MPMX26_02106	0.84	+0.1
2,160,702	+		MPMX26_02106	0.84	-1.9
2,160,709	+		MPMX26_02106	0.85	+1.2
2,160,724	+		MPMX26_02106	0.88	-0.2
2,160,838	+				+0.3
2,160,838	+				+1.3