Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01211

Experiment: TSB with Dermcidin 1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 1 ug/mL
1,284,856	-		MPMX26_01210	0.26	+0.3
1,284,856	-		MPMX26_01210	0.26	-0.6
1,284,856	-		MPMX26_01210	0.26	-0.3
1,284,856	-		MPMX26_01210	0.26	+0.1
1,284,871	-		MPMX26_01210	0.27	-0.8
1,284,924	-		MPMX26_01210	0.31	-0.5
1,284,939	-		MPMX26_01210	0.32	-0.4
1,284,957	-		MPMX26_01210	0.33	-0.5
1,284,968	-		MPMX26_01210	0.34	+0.1
1,284,968	-		MPMX26_01210	0.34	+0.1
1,285,029	-		MPMX26_01210	0.39	+0.3
1,285,035	-		MPMX26_01210	0.39	-0.3
1,285,035	-		MPMX26_01210	0.39	+0.6
1,285,116	-		MPMX26_01210	0.46	-0.6
1,285,116	-		MPMX26_01210	0.46	-0.3
1,285,132	-		MPMX26_01210	0.47	-0.3
1,285,137	-		MPMX26_01210	0.47	-0.2
1,285,137	-		MPMX26_01210	0.47	+0.0
1,285,138	-		MPMX26_01210	0.47	+0.1
1,285,138	-		MPMX26_01210	0.47	-2.6
1,285,138	-		MPMX26_01210	0.47	-0.8
1,285,253	-		MPMX26_01210	0.56	+0.4
1,285,255	-		MPMX26_01210	0.56	+0.7
1,285,255	-		MPMX26_01210	0.56	+0.7
1,285,289	-		MPMX26_01210	0.59	+0.1
1,285,289	-		MPMX26_01210	0.59	+0.2
1,285,296	-		MPMX26_01210	0.59	-0.1
1,285,296	-		MPMX26_01210	0.59	-0.8
1,285,298	-		MPMX26_01210	0.59	-0.1
1,285,298	-		MPMX26_01210	0.59	-0.0
1,285,298	-		MPMX26_01210	0.59	-0.5
1,285,298	-		MPMX26_01210	0.59	-0.4
1,285,303	-		MPMX26_01210	0.60	+0.0
1,285,303	-		MPMX26_01210	0.60	+0.0
1,285,303	-		MPMX26_01210	0.60	-0.3
1,285,312	-		MPMX26_01210	0.61	+1.2
1,285,313	-		MPMX26_01210	0.61	+0.5
1,285,372	-		MPMX26_01210	0.65	-1.2
1,285,437	-		MPMX26_01210	0.70	+1.0
1,285,460	-		MPMX26_01210	0.72	+0.0
1,285,460	-		MPMX26_01210	0.72	+0.4
1,285,461	-		MPMX26_01210	0.72	+0.1
1,285,514	-		MPMX26_01210	0.76	+0.1
1,285,514	-		MPMX26_01210	0.76	+0.8
1,285,514	-		MPMX26_01210	0.76	-0.2
1,285,516	-		MPMX26_01210	0.76	-0.3
1,285,516	-		MPMX26_01210	0.76	+0.1
1,285,516	-		MPMX26_01210	0.76	+0.1
1,285,540	-		MPMX26_01210	0.78	-0.6
1,285,550	-		MPMX26_01210	0.79	+0.2
1,285,550	-		MPMX26_01210	0.79	+0.0
1,285,550	-		MPMX26_01210	0.79	+0.4
1,285,550	-		MPMX26_01210	0.79	+1.0
1,285,550	-		MPMX26_01210	0.79	-1.5
1,285,605	-		MPMX26_01210	0.83	-0.3
1,285,682	-		MPMX26_01210	0.89	+0.5
1,285,682	-		MPMX26_01210	0.89	-1.7
1,285,682	-		MPMX26_01210	0.89	+0.2
1,285,743	-				-0.5
1,285,755	-				-1.4
1,285,755	-				-0.7
1,285,755	-				-0.5
1,285,762	-				+0.3
1,285,789	-				-0.6
1,285,789	-				+0.4
1,285,794	-				+0.3
1,285,834	-				-0.4
1,285,834	-				+0.3
1,285,846	-				-1.0
1,285,846	-				-0.8
1,285,846	-				+0.5
1,288,425	+				-1.2
1,288,425	+				+2.2
1,288,435	+				-0.2
1,288,435	+				-0.9
1,288,598	+		MPMX26_01212	0.21	+0.2
1,288,657	+		MPMX26_01212	0.26	-0.1
1,288,680	+		MPMX26_01212	0.29	-0.7
1,288,680	+		MPMX26_01212	0.29	-1.1
1,288,680	+		MPMX26_01212	0.29	+0.4
1,288,680	+		MPMX26_01212	0.29	+0.2
1,288,680	+		MPMX26_01212	0.29	-0.4
1,288,680	+		MPMX26_01212	0.29	+0.0
1,288,680	+		MPMX26_01212	0.29	-0.5
1,288,682	+		MPMX26_01212	0.29	-0.4
1,288,782	+		MPMX26_01212	0.39	-0.8
1,288,829	+		MPMX26_01212	0.43	+1.4
1,288,843	+		MPMX26_01212	0.45	-0.5
1,288,843	+		MPMX26_01212	0.45	-0.4
1,288,843	+		MPMX26_01212	0.45	-0.3
1,288,843	+		MPMX26_01212	0.45	-0.7
1,288,852	+		MPMX26_01212	0.46	+0.9
1,288,852	+		MPMX26_01212	0.46	-0.7
1,288,852	+		MPMX26_01212	0.46	+0.6
1,288,852	+		MPMX26_01212	0.46	+0.1
1,288,852	+		MPMX26_01212	0.46	-0.5
1,288,852	+		MPMX26_01212	0.46	-1.2
1,288,852	+		MPMX26_01212	0.46	-0.4
1,288,852	+		MPMX26_01212	0.46	-1.0
1,288,852	+		MPMX26_01212	0.46	+1.6
1,288,852	+		MPMX26_01212	0.46	-0.1
1,288,852	+		MPMX26_01212	0.46	+0.5
1,288,915	+		MPMX26_01212	0.52	-0.7
1,288,958	+		MPMX26_01212	0.56	-0.2
1,288,984	+		MPMX26_01212	0.59	-0.1
1,288,990	+		MPMX26_01212	0.59	-1.3
1,288,990	+		MPMX26_01212	0.59	-0.3
1,288,990	+		MPMX26_01212	0.59	-0.1
1,289,036	+		MPMX26_01212	0.64	+0.9
1,289,051	+		MPMX26_01212	0.65	-0.9
1,289,064	+		MPMX26_01212	0.66	+0.3
1,289,076	+		MPMX26_01212	0.68	+0.0
1,289,088	+		MPMX26_01212	0.69	-0.4
1,289,098	-		MPMX26_01212	0.70	-0.7
1,289,103	+		MPMX26_01212	0.70	+0.6
1,289,135	+		MPMX26_01212	0.73	-0.6
1,289,135	+		MPMX26_01212	0.73	+0.6
1,289,135	+		MPMX26_01212	0.73	-0.2
1,289,135	+		MPMX26_01212	0.73	-0.9
1,289,135	+		MPMX26_01212	0.73	+0.5
1,289,135	+		MPMX26_01212	0.73	-0.2
1,289,135	+		MPMX26_01212	0.73	+0.6
1,289,140	+		MPMX26_01212	0.74	+0.5
1,289,145	+		MPMX26_01212	0.74	-0.2
1,289,153	+		MPMX26_01212	0.75	+1.5
1,289,153	+		MPMX26_01212	0.75	-0.2
1,289,163	+		MPMX26_01212	0.76	-0.2
1,289,174	+		MPMX26_01212	0.77	-0.7
1,289,174	+		MPMX26_01212	0.77	-2.0
1,289,174	+		MPMX26_01212	0.77	-1.8
1,289,174	+		MPMX26_01212	0.77	-0.9
1,289,181	+		MPMX26_01212	0.78	+0.0
1,289,181	+		MPMX26_01212	0.78	+0.0
1,289,181	+		MPMX26_01212	0.78	+0.1
1,289,275	+		MPMX26_01212	0.87	-0.1
1,289,275	+		MPMX26_01212	0.87	+1.6