Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00649

Experiment: TSB with Dermcidin 1 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00648 and MPMX26_00649 are separated by 199 nucleotidesMPMX26_00649 and MPMX26_00650 are separated by 199 nucleotidesMPMX26_00650 and MPMX26_00651 are separated by 69 nucleotides MPMX26_00648: MPMX26_00648 - O-acyltransferase WSD, at 690,957 to 692,342 _00648 MPMX26_00649: MPMX26_00649 - Phosphoadenosine phosphosulfate reductase, at 692,542 to 693,276 _00649 MPMX26_00650: MPMX26_00650 - Phosphoserine phosphatase ThrH, at 693,476 to 694,093 _00650 MPMX26_00651: MPMX26_00651 - hypothetical protein, at 694,163 to 695,383 _00651 Position (kb) 692 693 694Strain fitness (log2 ratio) -2 -1 0 1 2at 691.551 kb on - strand, within MPMX26_00648at 691.551 kb on - strand, within MPMX26_00648at 691.551 kb on - strand, within MPMX26_00648at 691.551 kb on - strand, within MPMX26_00648at 691.617 kb on - strand, within MPMX26_00648at 691.619 kb on - strand, within MPMX26_00648at 691.641 kb on - strand, within MPMX26_00648at 691.656 kb on - strand, within MPMX26_00648at 691.656 kb on - strand, within MPMX26_00648at 691.656 kb on - strand, within MPMX26_00648at 691.709 kb on - strand, within MPMX26_00648at 691.709 kb on - strand, within MPMX26_00648at 691.740 kb on - strand, within MPMX26_00648at 691.740 kb on - strand, within MPMX26_00648at 691.740 kb on - strand, within MPMX26_00648at 691.742 kb on - strand, within MPMX26_00648at 691.742 kb on - strand, within MPMX26_00648at 691.773 kb on - strand, within MPMX26_00648at 691.773 kb on - strand, within MPMX26_00648at 691.773 kb on - strand, within MPMX26_00648at 691.830 kb on - strand, within MPMX26_00648at 691.853 kb on - strand, within MPMX26_00648at 691.857 kb on - strand, within MPMX26_00648at 691.868 kb on - strand, within MPMX26_00648at 691.880 kb on - strand, within MPMX26_00648at 691.985 kb on - strand, within MPMX26_00648at 692.004 kb on - strand, within MPMX26_00648at 692.013 kb on - strand, within MPMX26_00648at 692.040 kb on - strand, within MPMX26_00648at 692.066 kb on - strand, within MPMX26_00648at 692.066 kb on - strand, within MPMX26_00648at 692.148 kb on - strand, within MPMX26_00648at 692.148 kb on - strand, within MPMX26_00648at 692.180 kb on - strand, within MPMX26_00648at 692.286 kb on - strandat 692.608 kb on - strandat 692.608 kb on - strandat 692.730 kb on - strand, within MPMX26_00649at 692.731 kb on - strand, within MPMX26_00649at 692.764 kb on - strand, within MPMX26_00649at 692.764 kb on - strand, within MPMX26_00649at 692.781 kb on - strand, within MPMX26_00649at 692.893 kb on - strand, within MPMX26_00649at 692.961 kb on - strand, within MPMX26_00649at 692.988 kb on - strand, within MPMX26_00649at 693.483 kb on + strandat 693.504 kb on + strandat 693.570 kb on + strand, within MPMX26_00650at 693.572 kb on + strand, within MPMX26_00650at 693.572 kb on + strand, within MPMX26_00650at 693.596 kb on + strand, within MPMX26_00650at 693.596 kb on + strand, within MPMX26_00650at 693.596 kb on + strand, within MPMX26_00650at 693.636 kb on + strand, within MPMX26_00650at 693.636 kb on + strand, within MPMX26_00650at 693.707 kb on + strand, within MPMX26_00650at 693.707 kb on + strand, within MPMX26_00650at 693.712 kb on + strand, within MPMX26_00650at 693.712 kb on + strand, within MPMX26_00650at 693.713 kb on + strand, within MPMX26_00650at 693.776 kb on + strand, within MPMX26_00650at 693.782 kb on + strand, within MPMX26_00650at 693.814 kb on + strand, within MPMX26_00650at 693.814 kb on + strand, within MPMX26_00650at 693.814 kb on + strand, within MPMX26_00650at 693.833 kb on + strand, within MPMX26_00650at 693.838 kb on + strand, within MPMX26_00650at 693.861 kb on + strand, within MPMX26_00650at 693.866 kb on + strand, within MPMX26_00650at 693.890 kb on + strand, within MPMX26_00650at 693.893 kb on + strand, within MPMX26_00650at 693.931 kb on + strand, within MPMX26_00650at 693.940 kb on + strand, within MPMX26_00650at 693.945 kb on + strand, within MPMX26_00650at 693.955 kb on + strand, within MPMX26_00650at 693.955 kb on + strand, within MPMX26_00650at 693.955 kb on + strand, within MPMX26_00650at 693.955 kb on + strand, within MPMX26_00650at 693.955 kb on + strand, within MPMX26_00650at 693.964 kb on + strand, within MPMX26_00650at 693.965 kb on + strand, within MPMX26_00650at 694.018 kb on + strand, within MPMX26_00650at 694.018 kb on + strand, within MPMX26_00650at 694.018 kb on + strand, within MPMX26_00650at 694.018 kb on + strand, within MPMX26_00650at 694.033 kb on + strandat 694.033 kb on + strandat 694.043 kb on + strandat 694.043 kb on + strandat 694.188 kb on + strandat 694.201 kb on + strandat 694.234 kb on + strandat 694.246 kb on + strandat 694.271 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB with Dermcidin 1 ug/mL
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691,551 - MPMX26_00648 0.43 -0.9
691,551 - MPMX26_00648 0.43 -0.8
691,551 - MPMX26_00648 0.43 +1.3
691,551 - MPMX26_00648 0.43 -0.2
691,617 - MPMX26_00648 0.48 +0.8
691,619 - MPMX26_00648 0.48 +1.0
691,641 - MPMX26_00648 0.49 -1.0
691,656 - MPMX26_00648 0.50 +0.2
691,656 - MPMX26_00648 0.50 +1.2
691,656 - MPMX26_00648 0.50 -1.2
691,709 - MPMX26_00648 0.54 -1.6
691,709 - MPMX26_00648 0.54 +0.0
691,740 - MPMX26_00648 0.56 -1.4
691,740 - MPMX26_00648 0.56 -0.0
691,740 - MPMX26_00648 0.56 -1.3
691,742 - MPMX26_00648 0.57 +1.2
691,742 - MPMX26_00648 0.57 -1.1
691,773 - MPMX26_00648 0.59 +0.6
691,773 - MPMX26_00648 0.59 -0.4
691,773 - MPMX26_00648 0.59 -0.2
691,830 - MPMX26_00648 0.63 +1.3
691,853 - MPMX26_00648 0.65 +0.8
691,857 - MPMX26_00648 0.65 +0.4
691,868 - MPMX26_00648 0.66 -0.9
691,880 - MPMX26_00648 0.67 -0.3
691,985 - MPMX26_00648 0.74 -0.8
692,004 - MPMX26_00648 0.76 +0.3
692,013 - MPMX26_00648 0.76 -0.2
692,040 - MPMX26_00648 0.78 +0.6
692,066 - MPMX26_00648 0.80 -0.1
692,066 - MPMX26_00648 0.80 +0.6
692,148 - MPMX26_00648 0.86 -0.2
692,148 - MPMX26_00648 0.86 -1.0
692,180 - MPMX26_00648 0.88 -0.3
692,286 - -0.7
692,608 - -1.2
692,608 - -1.1
692,730 - MPMX26_00649 0.26 -1.0
692,731 - MPMX26_00649 0.26 -1.3
692,764 - MPMX26_00649 0.30 -0.4
692,764 - MPMX26_00649 0.30 +2.2
692,781 - MPMX26_00649 0.33 -0.3
692,893 - MPMX26_00649 0.48 -0.7
692,961 - MPMX26_00649 0.57 -0.6
692,988 - MPMX26_00649 0.61 -0.2
693,483 + -0.3
693,504 + +0.1
693,570 + MPMX26_00650 0.15 -0.1
693,572 + MPMX26_00650 0.16 -1.1
693,572 + MPMX26_00650 0.16 -0.1
693,596 + MPMX26_00650 0.19 -0.6
693,596 + MPMX26_00650 0.19 -0.1
693,596 + MPMX26_00650 0.19 -0.2
693,636 + MPMX26_00650 0.26 +0.2
693,636 + MPMX26_00650 0.26 -0.6
693,707 + MPMX26_00650 0.37 +0.2
693,707 + MPMX26_00650 0.37 -2.0
693,712 + MPMX26_00650 0.38 -0.3
693,712 + MPMX26_00650 0.38 -0.9
693,713 + MPMX26_00650 0.38 -0.3
693,776 + MPMX26_00650 0.49 +0.2
693,782 + MPMX26_00650 0.50 -1.0
693,814 + MPMX26_00650 0.55 -0.7
693,814 + MPMX26_00650 0.55 -0.0
693,814 + MPMX26_00650 0.55 +0.2
693,833 + MPMX26_00650 0.58 +0.0
693,838 + MPMX26_00650 0.59 -0.2
693,861 + MPMX26_00650 0.62 -0.6
693,866 + MPMX26_00650 0.63 +0.6
693,890 + MPMX26_00650 0.67 -0.7
693,893 + MPMX26_00650 0.67 +0.5
693,931 + MPMX26_00650 0.74 -0.6
693,940 + MPMX26_00650 0.75 +0.8
693,945 + MPMX26_00650 0.76 -0.1
693,955 + MPMX26_00650 0.78 +0.1
693,955 + MPMX26_00650 0.78 +0.6
693,955 + MPMX26_00650 0.78 -0.1
693,955 + MPMX26_00650 0.78 -0.5
693,955 + MPMX26_00650 0.78 +0.5
693,964 + MPMX26_00650 0.79 +0.6
693,965 + MPMX26_00650 0.79 -0.1
694,018 + MPMX26_00650 0.88 -0.3
694,018 + MPMX26_00650 0.88 -1.0
694,018 + MPMX26_00650 0.88 +0.2
694,018 + MPMX26_00650 0.88 -0.3
694,033 + -0.4
694,033 + +0.3
694,043 + +0.3
694,043 + +0.6
694,188 + +0.1
694,201 + -0.5
694,234 + +0.6
694,246 + -0.7
694,271 - -0.3

Or see this region's nucleotide sequence