Experiment: TSB with Dermcidin 1 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00399 and MPMX26_00400 are separated by 58 nucleotides MPMX26_00400 and MPMX26_00401 are separated by 110 nucleotides MPMX26_00401 and MPMX26_00402 overlap by 4 nucleotides MPMX26_00402 and MPMX26_00403 overlap by 1 nucleotides
MPMX26_00399: MPMX26_00399 - hypothetical protein, at 426,071 to 426,946
_00399
MPMX26_00400: MPMX26_00400 - dITP/XTP pyrophosphatase, at 427,005 to 427,637
_00400
MPMX26_00401: MPMX26_00401 - hypothetical protein, at 427,748 to 428,338
_00401
MPMX26_00402: MPMX26_00402 - Bifunctional methionine biosynthesis protein MetXA/MetW, at 428,335 to 428,928
_00402
MPMX26_00403: MPMX26_00403 - Homoserine O-succinyltransferase, at 428,928 to 430,088
_00403
Position (kb) 427
428
429 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 426.773 kb on + strand, within MPMX26_00399 at 426.778 kb on + strand, within MPMX26_00399 at 426.778 kb on + strand, within MPMX26_00399 at 426.778 kb on + strand, within MPMX26_00399 at 426.778 kb on + strand, within MPMX26_00399 at 426.778 kb on + strand, within MPMX26_00399 at 426.786 kb on - strand, within MPMX26_00399 at 426.881 kb on + strand at 427.096 kb on - strand, within MPMX26_00400 at 427.101 kb on - strand, within MPMX26_00400 at 427.101 kb on - strand, within MPMX26_00400 at 427.101 kb on - strand, within MPMX26_00400 at 427.101 kb on - strand, within MPMX26_00400 at 427.101 kb on - strand, within MPMX26_00400 at 427.101 kb on - strand, within MPMX26_00400 at 427.101 kb on - strand, within MPMX26_00400 at 427.101 kb on - strand, within MPMX26_00400 at 427.101 kb on - strand, within MPMX26_00400 at 427.101 kb on - strand, within MPMX26_00400 at 427.101 kb on - strand, within MPMX26_00400 at 427.101 kb on - strand, within MPMX26_00400 at 427.101 kb on - strand, within MPMX26_00400 at 427.101 kb on - strand, within MPMX26_00400 at 427.101 kb on - strand, within MPMX26_00400 at 427.101 kb on - strand, within MPMX26_00400 at 427.101 kb on - strand, within MPMX26_00400 at 427.106 kb on - strand, within MPMX26_00400 at 427.112 kb on - strand, within MPMX26_00400 at 427.112 kb on - strand, within MPMX26_00400 at 427.125 kb on - strand, within MPMX26_00400 at 427.125 kb on - strand, within MPMX26_00400 at 427.130 kb on - strand, within MPMX26_00400 at 427.130 kb on - strand, within MPMX26_00400 at 427.130 kb on - strand, within MPMX26_00400 at 427.130 kb on - strand, within MPMX26_00400 at 427.151 kb on - strand, within MPMX26_00400 at 427.151 kb on - strand, within MPMX26_00400 at 427.151 kb on - strand, within MPMX26_00400 at 427.241 kb on - strand, within MPMX26_00400 at 427.241 kb on - strand, within MPMX26_00400 at 427.253 kb on - strand, within MPMX26_00400 at 427.253 kb on - strand, within MPMX26_00400 at 427.481 kb on - strand, within MPMX26_00400 at 427.481 kb on - strand, within MPMX26_00400 at 427.481 kb on - strand, within MPMX26_00400 at 427.481 kb on - strand, within MPMX26_00400 at 427.538 kb on - strand, within MPMX26_00400 at 427.806 kb on - strand at 427.812 kb on - strand, within MPMX26_00401 at 427.812 kb on - strand, within MPMX26_00401 at 427.818 kb on - strand, within MPMX26_00401 at 427.818 kb on - strand, within MPMX26_00401 at 427.827 kb on - strand, within MPMX26_00401 at 427.872 kb on - strand, within MPMX26_00401 at 427.882 kb on - strand, within MPMX26_00401 at 427.886 kb on - strand, within MPMX26_00401 at 427.888 kb on - strand, within MPMX26_00401 at 427.896 kb on - strand, within MPMX26_00401 at 427.896 kb on - strand, within MPMX26_00401 at 427.896 kb on - strand, within MPMX26_00401 at 427.896 kb on - strand, within MPMX26_00401 at 427.896 kb on - strand, within MPMX26_00401 at 427.896 kb on - strand, within MPMX26_00401 at 427.896 kb on - strand, within MPMX26_00401 at 427.896 kb on - strand, within MPMX26_00401 at 427.896 kb on - strand, within MPMX26_00401 at 427.896 kb on - strand, within MPMX26_00401 at 427.908 kb on - strand, within MPMX26_00401 at 427.908 kb on - strand, within MPMX26_00401 at 427.914 kb on - strand, within MPMX26_00401 at 427.916 kb on - strand, within MPMX26_00401 at 427.916 kb on - strand, within MPMX26_00401 at 427.938 kb on - strand, within MPMX26_00401 at 427.953 kb on - strand, within MPMX26_00401 at 427.953 kb on - strand, within MPMX26_00401 at 427.953 kb on - strand, within MPMX26_00401 at 427.953 kb on - strand, within MPMX26_00401 at 427.954 kb on - strand, within MPMX26_00401 at 427.969 kb on - strand, within MPMX26_00401 at 428.040 kb on - strand, within MPMX26_00401 at 428.040 kb on - strand, within MPMX26_00401 at 428.045 kb on - strand, within MPMX26_00401 at 428.050 kb on - strand, within MPMX26_00401 at 428.050 kb on - strand, within MPMX26_00401 at 428.065 kb on - strand, within MPMX26_00401 at 428.077 kb on - strand, within MPMX26_00401 at 428.077 kb on - strand, within MPMX26_00401 at 428.077 kb on - strand, within MPMX26_00401 at 428.078 kb on - strand, within MPMX26_00401 at 428.078 kb on - strand, within MPMX26_00401 at 428.083 kb on - strand, within MPMX26_00401 at 428.083 kb on - strand, within MPMX26_00401 at 428.099 kb on - strand, within MPMX26_00401 at 428.099 kb on - strand, within MPMX26_00401 at 428.099 kb on - strand, within MPMX26_00401 at 428.099 kb on - strand, within MPMX26_00401 at 428.099 kb on - strand, within MPMX26_00401 at 428.099 kb on - strand, within MPMX26_00401 at 428.099 kb on - strand, within MPMX26_00401 at 428.154 kb on - strand, within MPMX26_00401 at 428.154 kb on - strand, within MPMX26_00401 at 428.154 kb on - strand, within MPMX26_00401 at 428.154 kb on - strand, within MPMX26_00401 at 428.168 kb on - strand, within MPMX26_00401 at 428.168 kb on - strand, within MPMX26_00401 at 428.168 kb on - strand, within MPMX26_00401 at 428.204 kb on - strand, within MPMX26_00401 at 428.204 kb on - strand, within MPMX26_00401 at 428.204 kb on - strand, within MPMX26_00401 at 428.204 kb on - strand, within MPMX26_00401 at 428.204 kb on - strand, within MPMX26_00401 at 428.204 kb on - strand, within MPMX26_00401 at 428.209 kb on - strand, within MPMX26_00401 at 428.229 kb on - strand, within MPMX26_00401 at 428.246 kb on - strand, within MPMX26_00401 at 428.246 kb on - strand, within MPMX26_00401 at 428.246 kb on - strand, within MPMX26_00401 at 428.246 kb on - strand, within MPMX26_00401 at 428.255 kb on - strand, within MPMX26_00401 at 428.255 kb on - strand, within MPMX26_00401 at 428.273 kb on - strand, within MPMX26_00401 at 428.285 kb on - strand at 428.290 kb on - strand at 428.290 kb on - strand at 428.321 kb on - strand at 428.326 kb on - strand at 428.400 kb on - strand, within MPMX26_00402 at 428.403 kb on - strand, within MPMX26_00402 at 428.422 kb on - strand, within MPMX26_00402 at 428.477 kb on - strand, within MPMX26_00402 at 428.507 kb on - strand, within MPMX26_00402 at 428.515 kb on - strand, within MPMX26_00402 at 428.515 kb on - strand, within MPMX26_00402 at 428.515 kb on - strand, within MPMX26_00402 at 428.517 kb on - strand, within MPMX26_00402 at 428.522 kb on - strand, within MPMX26_00402 at 428.527 kb on - strand, within MPMX26_00402 at 428.527 kb on - strand, within MPMX26_00402 at 428.532 kb on - strand, within MPMX26_00402 at 428.532 kb on - strand, within MPMX26_00402 at 428.532 kb on - strand, within MPMX26_00402 at 428.532 kb on - strand, within MPMX26_00402 at 428.532 kb on - strand, within MPMX26_00402 at 428.601 kb on - strand, within MPMX26_00402 at 428.765 kb on - strand, within MPMX26_00402 at 428.885 kb on - strand at 428.885 kb on - strand at 428.896 kb on - strand at 428.919 kb on - strand at 428.919 kb on - strand at 428.933 kb on - strand at 428.933 kb on - strand at 428.958 kb on - strand at 428.958 kb on - strand at 428.958 kb on - strand at 428.958 kb on - strand at 428.960 kb on - strand at 428.960 kb on - strand at 428.960 kb on - strand at 428.963 kb on - strand at 429.038 kb on - strand at 429.038 kb on - strand at 429.038 kb on - strand at 429.038 kb on - strand at 429.038 kb on - strand at 429.043 kb on - strand at 429.086 kb on - strand, within MPMX26_00403 at 429.170 kb on - strand, within MPMX26_00403 at 429.183 kb on - strand, within MPMX26_00403 at 429.189 kb on - strand, within MPMX26_00403 at 429.189 kb on - strand, within MPMX26_00403 at 429.217 kb on - strand, within MPMX26_00403 at 429.222 kb on - strand, within MPMX26_00403 at 429.222 kb on - strand, within MPMX26_00403 at 429.227 kb on - strand, within MPMX26_00403 at 429.255 kb on - strand, within MPMX26_00403 at 429.281 kb on - strand, within MPMX26_00403 at 429.288 kb on - strand, within MPMX26_00403 at 429.305 kb on - strand, within MPMX26_00403
Per-strain Table
Position Strand Gene LocusTag Fraction TSB with Dermcidin 1 ug/mL remove 426,773 + MPMX26_00399 0.80 -0.5 426,778 + MPMX26_00399 0.81 +2.5 426,778 + MPMX26_00399 0.81 +0.1 426,778 + MPMX26_00399 0.81 +0.5 426,778 + MPMX26_00399 0.81 +1.0 426,778 + MPMX26_00399 0.81 +0.2 426,786 - MPMX26_00399 0.82 -0.2 426,881 + +0.4 427,096 - MPMX26_00400 0.14 +0.1 427,101 - MPMX26_00400 0.15 -0.2 427,101 - MPMX26_00400 0.15 -0.2 427,101 - MPMX26_00400 0.15 +0.5 427,101 - MPMX26_00400 0.15 -1.5 427,101 - MPMX26_00400 0.15 +1.0 427,101 - MPMX26_00400 0.15 +0.2 427,101 - MPMX26_00400 0.15 -0.7 427,101 - MPMX26_00400 0.15 +0.2 427,101 - MPMX26_00400 0.15 +0.0 427,101 - MPMX26_00400 0.15 -0.5 427,101 - MPMX26_00400 0.15 +0.8 427,101 - MPMX26_00400 0.15 +0.1 427,101 - MPMX26_00400 0.15 -0.1 427,101 - MPMX26_00400 0.15 +0.0 427,101 - MPMX26_00400 0.15 +0.0 427,101 - MPMX26_00400 0.15 -0.1 427,101 - MPMX26_00400 0.15 +0.0 427,106 - MPMX26_00400 0.16 -0.1 427,112 - MPMX26_00400 0.17 -0.4 427,112 - MPMX26_00400 0.17 +0.0 427,125 - MPMX26_00400 0.19 -0.1 427,125 - MPMX26_00400 0.19 +0.2 427,130 - MPMX26_00400 0.20 -0.9 427,130 - MPMX26_00400 0.20 +0.8 427,130 - MPMX26_00400 0.20 -1.0 427,130 - MPMX26_00400 0.20 -0.5 427,151 - MPMX26_00400 0.23 +0.3 427,151 - MPMX26_00400 0.23 -0.0 427,151 - MPMX26_00400 0.23 -0.9 427,241 - MPMX26_00400 0.37 -0.4 427,241 - MPMX26_00400 0.37 -0.6 427,253 - MPMX26_00400 0.39 +0.6 427,253 - MPMX26_00400 0.39 -0.1 427,481 - MPMX26_00400 0.75 -0.3 427,481 - MPMX26_00400 0.75 -0.3 427,481 - MPMX26_00400 0.75 +0.7 427,481 - MPMX26_00400 0.75 +0.2 427,538 - MPMX26_00400 0.84 -0.5 427,806 - +0.2 427,812 - MPMX26_00401 0.11 -0.4 427,812 - MPMX26_00401 0.11 -0.5 427,818 - MPMX26_00401 0.12 -0.0 427,818 - MPMX26_00401 0.12 -0.2 427,827 - MPMX26_00401 0.13 -1.4 427,872 - MPMX26_00401 0.21 -1.2 427,882 - MPMX26_00401 0.23 -1.9 427,886 - MPMX26_00401 0.23 -1.2 427,888 - MPMX26_00401 0.24 -0.5 427,896 - MPMX26_00401 0.25 -1.4 427,896 - MPMX26_00401 0.25 -1.5 427,896 - MPMX26_00401 0.25 -2.0 427,896 - MPMX26_00401 0.25 +0.3 427,896 - MPMX26_00401 0.25 -0.4 427,896 - MPMX26_00401 0.25 -1.8 427,896 - MPMX26_00401 0.25 -1.0 427,896 - MPMX26_00401 0.25 -0.5 427,896 - MPMX26_00401 0.25 -0.5 427,896 - MPMX26_00401 0.25 -0.6 427,908 - MPMX26_00401 0.27 -0.7 427,908 - MPMX26_00401 0.27 -1.9 427,914 - MPMX26_00401 0.28 -0.1 427,916 - MPMX26_00401 0.28 -0.7 427,916 - MPMX26_00401 0.28 -0.8 427,938 - MPMX26_00401 0.32 -0.5 427,953 - MPMX26_00401 0.35 +0.1 427,953 - MPMX26_00401 0.35 -0.6 427,953 - MPMX26_00401 0.35 -0.5 427,953 - MPMX26_00401 0.35 -1.8 427,954 - MPMX26_00401 0.35 -1.2 427,969 - MPMX26_00401 0.37 -0.6 428,040 - MPMX26_00401 0.49 -2.5 428,040 - MPMX26_00401 0.49 -1.1 428,045 - MPMX26_00401 0.50 -0.3 428,050 - MPMX26_00401 0.51 +0.1 428,050 - MPMX26_00401 0.51 -1.2 428,065 - MPMX26_00401 0.54 -1.8 428,077 - MPMX26_00401 0.56 -1.0 428,077 - MPMX26_00401 0.56 -1.2 428,077 - MPMX26_00401 0.56 -0.5 428,078 - MPMX26_00401 0.56 -1.4 428,078 - MPMX26_00401 0.56 -1.0 428,083 - MPMX26_00401 0.57 -2.2 428,083 - MPMX26_00401 0.57 -0.5 428,099 - MPMX26_00401 0.59 -0.0 428,099 - MPMX26_00401 0.59 -0.4 428,099 - MPMX26_00401 0.59 -0.0 428,099 - MPMX26_00401 0.59 -0.8 428,099 - MPMX26_00401 0.59 -0.4 428,099 - MPMX26_00401 0.59 -1.0 428,099 - MPMX26_00401 0.59 -1.2 428,154 - MPMX26_00401 0.69 -0.7 428,154 - MPMX26_00401 0.69 -1.9 428,154 - MPMX26_00401 0.69 -0.5 428,154 - MPMX26_00401 0.69 -2.4 428,168 - MPMX26_00401 0.71 -1.6 428,168 - MPMX26_00401 0.71 +0.2 428,168 - MPMX26_00401 0.71 -1.5 428,204 - MPMX26_00401 0.77 -0.4 428,204 - MPMX26_00401 0.77 -1.4 428,204 - MPMX26_00401 0.77 -1.2 428,204 - MPMX26_00401 0.77 -1.4 428,204 - MPMX26_00401 0.77 -2.4 428,204 - MPMX26_00401 0.77 -1.4 428,209 - MPMX26_00401 0.78 -0.8 428,229 - MPMX26_00401 0.81 -0.8 428,246 - MPMX26_00401 0.84 -0.8 428,246 - MPMX26_00401 0.84 -0.4 428,246 - MPMX26_00401 0.84 -0.5 428,246 - MPMX26_00401 0.84 -0.0 428,255 - MPMX26_00401 0.86 +0.7 428,255 - MPMX26_00401 0.86 -0.2 428,273 - MPMX26_00401 0.89 -0.9 428,285 - -0.9 428,290 - -0.3 428,290 - -0.2 428,321 - -2.7 428,326 - +1.0 428,400 - MPMX26_00402 0.11 -0.4 428,403 - MPMX26_00402 0.11 -0.2 428,422 - MPMX26_00402 0.15 -3.0 428,477 - MPMX26_00402 0.24 +1.4 428,507 - MPMX26_00402 0.29 -2.5 428,515 - MPMX26_00402 0.30 -0.8 428,515 - MPMX26_00402 0.30 -1.4 428,515 - MPMX26_00402 0.30 -0.8 428,517 - MPMX26_00402 0.31 -0.9 428,522 - MPMX26_00402 0.31 -0.4 428,527 - MPMX26_00402 0.32 +1.0 428,527 - MPMX26_00402 0.32 -0.3 428,532 - MPMX26_00402 0.33 +0.7 428,532 - MPMX26_00402 0.33 -0.3 428,532 - MPMX26_00402 0.33 -0.7 428,532 - MPMX26_00402 0.33 -0.6 428,532 - MPMX26_00402 0.33 -1.3 428,601 - MPMX26_00402 0.45 -0.5 428,765 - MPMX26_00402 0.72 -0.3 428,885 - +0.5 428,885 - +0.5 428,896 - -0.0 428,919 - -0.6 428,919 - +0.3 428,933 - +0.1 428,933 - -0.9 428,958 - -0.5 428,958 - -0.4 428,958 - -0.7 428,958 - -0.8 428,960 - -1.9 428,960 - -0.3 428,960 - +1.5 428,963 - +0.5 429,038 - -0.6 429,038 - -0.2 429,038 - +0.1 429,038 - -0.3 429,038 - +0.2 429,043 - -0.8 429,086 - MPMX26_00403 0.14 -1.1 429,170 - MPMX26_00403 0.21 -0.0 429,183 - MPMX26_00403 0.22 -0.3 429,189 - MPMX26_00403 0.22 +0.5 429,189 - MPMX26_00403 0.22 -0.1 429,217 - MPMX26_00403 0.25 -0.5 429,222 - MPMX26_00403 0.25 -0.1 429,222 - MPMX26_00403 0.25 -0.7 429,227 - MPMX26_00403 0.26 +0.2 429,255 - MPMX26_00403 0.28 +0.5 429,281 - MPMX26_00403 0.30 -1.5 429,288 - MPMX26_00403 0.31 -1.0 429,305 - MPMX26_00403 0.32 -0.9
Or see this region's nucleotide sequence