Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03022

Experiment: TSB with Dermcidin 1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 1 ug/mL
3,140,320	+		MPMX26_03021	0.25	-0.7
3,140,325	+		MPMX26_03021	0.26	+2.9
3,140,400	+		MPMX26_03021	0.31	+3.2
3,140,400	+		MPMX26_03021	0.31	+0.6
3,140,400	+		MPMX26_03021	0.31	-1.3
3,140,400	+		MPMX26_03021	0.31	-1.1
3,140,400	+		MPMX26_03021	0.31	+1.5
3,140,400	+		MPMX26_03021	0.31	+1.1
3,140,434	+		MPMX26_03021	0.34	+0.1
3,140,446	+		MPMX26_03021	0.35	+0.6
3,140,446	+		MPMX26_03021	0.35	+0.9
3,140,446	+		MPMX26_03021	0.35	-0.4
3,140,446	+		MPMX26_03021	0.35	-2.4
3,140,452	+		MPMX26_03021	0.35	-1.9
3,140,452	+		MPMX26_03021	0.35	-0.1
3,140,457	+		MPMX26_03021	0.36	+1.5
3,140,457	+		MPMX26_03021	0.36	+1.7
3,140,467	+		MPMX26_03021	0.37	-1.3
3,140,487	+		MPMX26_03021	0.38	+0.7
3,140,488	+		MPMX26_03021	0.38	-0.6
3,140,501	+		MPMX26_03021	0.39	+1.5
3,140,504	+		MPMX26_03021	0.39	+0.5
3,140,527	+		MPMX26_03021	0.41	-0.1
3,140,550	+		MPMX26_03021	0.43	+0.7
3,140,597	+		MPMX26_03021	0.47	+0.6
3,140,597	+		MPMX26_03021	0.47	+0.9
3,140,597	+		MPMX26_03021	0.47	-0.9
3,140,597	+		MPMX26_03021	0.47	-1.0
3,140,610	+		MPMX26_03021	0.48	-0.1
3,140,620	+		MPMX26_03021	0.48	-0.3
3,140,626	+		MPMX26_03021	0.49	-1.6
3,140,626	+		MPMX26_03021	0.49	-0.6
3,140,626	+		MPMX26_03021	0.49	-1.7
3,140,626	+		MPMX26_03021	0.49	+0.2
3,140,626	+		MPMX26_03021	0.49	-0.3
3,140,626	+		MPMX26_03021	0.49	+1.5
3,140,626	+		MPMX26_03021	0.49	-1.0
3,140,626	+		MPMX26_03021	0.49	-0.3
3,140,626	+		MPMX26_03021	0.49	+1.5
3,140,626	+		MPMX26_03021	0.49	+0.8
3,140,626	+		MPMX26_03021	0.49	-1.3
3,140,626	+		MPMX26_03021	0.49	-0.9
3,140,626	+		MPMX26_03021	0.49	+0.5
3,140,626	+		MPMX26_03021	0.49	-0.8
3,140,626	+		MPMX26_03021	0.49	-2.5
3,140,626	+		MPMX26_03021	0.49	-2.4
3,140,626	+		MPMX26_03021	0.49	-1.5
3,140,626	+		MPMX26_03021	0.49	-0.2
3,140,652	+		MPMX26_03021	0.51	-0.8
3,140,652	+		MPMX26_03021	0.51	-2.6
3,140,680	+		MPMX26_03021	0.53	+0.3
3,140,680	+		MPMX26_03021	0.53	-0.3
3,140,680	+		MPMX26_03021	0.53	-0.7
3,140,695	+		MPMX26_03021	0.54	-0.7
3,140,695	+		MPMX26_03021	0.54	-0.7
3,140,695	+		MPMX26_03021	0.54	-0.8
3,140,700	+		MPMX26_03021	0.54	-0.3
3,140,737	+		MPMX26_03021	0.57	-0.6
3,140,738	+		MPMX26_03021	0.57	-0.9
3,140,745	+		MPMX26_03021	0.58	+0.4
3,140,748	+		MPMX26_03021	0.58	+0.3
3,140,748	+		MPMX26_03021	0.58	-0.4
3,140,748	+		MPMX26_03021	0.58	+0.3
3,140,788	+		MPMX26_03021	0.61	+2.9
3,140,788	+		MPMX26_03021	0.61	-0.1
3,140,788	+		MPMX26_03021	0.61	-0.2
3,140,798	+		MPMX26_03021	0.62	-0.1
3,140,798	+		MPMX26_03021	0.62	-0.5
3,140,816	+		MPMX26_03021	0.63	-0.1
3,140,816	+		MPMX26_03021	0.63	-1.6
3,140,816	+		MPMX26_03021	0.63	-0.7
3,140,816	+		MPMX26_03021	0.63	-0.8
3,140,862	+		MPMX26_03021	0.67	+0.5
3,140,862	+		MPMX26_03021	0.67	+0.4
3,140,862	+		MPMX26_03021	0.67	-0.7
3,140,869	+		MPMX26_03021	0.67	+0.1
3,140,890	+		MPMX26_03021	0.69	-0.5
3,140,890	+		MPMX26_03021	0.69	+0.0
3,140,890	+		MPMX26_03021	0.69	+0.5
3,140,890	+		MPMX26_03021	0.69	+1.1
3,140,904	+		MPMX26_03021	0.70	-0.5
3,140,929	+		MPMX26_03021	0.72	-1.7
3,141,013	+		MPMX26_03021	0.78	-0.2
3,141,014	+		MPMX26_03021	0.78	+0.2
3,141,033	+		MPMX26_03021	0.80	-0.9
3,141,033	+		MPMX26_03021	0.80	+0.2
3,141,075	+		MPMX26_03021	0.83	-0.3
3,141,076	+		MPMX26_03021	0.83	-1.7
3,141,076	+		MPMX26_03021	0.83	-0.2
3,141,076	+		MPMX26_03021	0.83	+0.6
3,141,076	+		MPMX26_03021	0.83	+0.9
3,141,101	+		MPMX26_03021	0.85	-2.0
3,141,146	+		MPMX26_03021	0.89	-0.8
3,141,151	+		MPMX26_03021	0.89	-2.5
3,141,151	+		MPMX26_03021	0.89	-0.9
3,141,176	+				-0.9
3,141,187	+				-1.0
3,141,197	+				-0.4
3,141,197	+				+0.9
3,141,204	+				+1.5
3,141,209	+				-0.4
3,141,209	+				+0.1
3,141,209	+				-3.4
3,141,209	+				-1.9
3,141,214	+				-1.6
3,141,219	+				-0.0
3,141,324	-				+0.2
3,141,754	+		MPMX26_03022	0.54	-1.2
3,141,999	-		MPMX26_03022	0.84	-0.1
3,142,047	-		MPMX26_03022	0.90	-0.3
3,142,049	+				+0.6
3,142,057	-				+0.6
3,142,203	-				+0.0
3,142,203	-				+0.5
3,142,233	-		MPMX26_03023	0.12	+0.4
3,142,320	-		MPMX26_03023	0.79	-0.0
3,142,349	-				+0.2
3,142,359	-				+0.2
3,142,359	-				+1.2
3,142,361	-				+1.1
3,142,361	-				-0.1
3,142,361	-				+1.5
3,142,377	-				+0.6
3,142,377	-				-0.6
3,142,387	-				+0.3
3,142,389	-				+0.6
3,142,396	-				+0.7
3,142,408	-				-1.0
3,142,410	-				-0.6
3,142,410	-				-0.1
3,142,443	-				+0.2
3,142,494	-				-1.9
3,142,502	-				-0.8
3,142,502	-				+0.2
3,142,515	-		MPMX26_03024	0.11	-0.4
3,142,515	-		MPMX26_03024	0.11	-0.1
3,142,555	-		MPMX26_03024	0.14	+0.3
3,142,560	-		MPMX26_03024	0.14	-0.1
3,142,613	-		MPMX26_03024	0.17	+0.9
3,142,613	-		MPMX26_03024	0.17	+0.7
3,142,613	-		MPMX26_03024	0.17	+1.1
3,142,642	-		MPMX26_03024	0.19	-0.3
3,142,691	-		MPMX26_03024	0.23	-1.4
3,142,728	-		MPMX26_03024	0.25	-0.9
3,142,789	-		MPMX26_03024	0.29	-0.1
3,142,798	-		MPMX26_03024	0.30	+0.0
3,142,824	-		MPMX26_03024	0.32	-0.1
3,142,836	-		MPMX26_03024	0.33	+0.3
3,142,853	-		MPMX26_03024	0.34	+0.8
3,142,880	-		MPMX26_03024	0.35	+0.0
3,142,880	-		MPMX26_03024	0.35	+0.8
3,142,880	-		MPMX26_03024	0.35	-0.1
3,142,890	-		MPMX26_03024	0.36	-0.3
3,142,901	-		MPMX26_03024	0.37	-1.4
3,142,957	-		MPMX26_03024	0.41	+0.6
3,142,974	-		MPMX26_03024	0.42	+0.9
3,142,978	-		MPMX26_03024	0.42	-0.6
3,142,978	-		MPMX26_03024	0.42	-0.4
3,142,997	-		MPMX26_03024	0.43	+0.7
3,142,997	-		MPMX26_03024	0.43	-0.5
3,143,002	-		MPMX26_03024	0.44	-0.7
3,143,121	-		MPMX26_03024	0.52	+0.9