Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02856

Experiment: TSB with Dermcidin 1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 1 ug/mL
2,945,213	-				+0.7
2,945,433	-				-0.4
2,945,434	-				+1.1
2,945,440	-				+0.2
2,945,573	-		MPMX26_02855	0.28	-0.4
2,945,757	-		MPMX26_02855	0.56	-0.9
2,945,768	+		MPMX26_02855	0.58	+0.2
2,945,775	-		MPMX26_02855	0.59	+1.3
2,945,793	-		MPMX26_02855	0.62	+0.2
2,945,847	-		MPMX26_02855	0.70	+0.2
2,945,847	-		MPMX26_02855	0.70	+1.1
2,945,847	-		MPMX26_02855	0.70	+0.5
2,945,884	-		MPMX26_02855	0.76	-1.3
2,945,908	-		MPMX26_02855	0.80	+0.6
2,945,971	-		MPMX26_02855	0.89	+1.2
2,945,999	-				-0.1
2,946,018	-				+0.5
2,946,184	+				+0.7
2,946,340	+		MPMX26_02856	0.18	+0.5
2,946,340	+		MPMX26_02856	0.18	-2.0
2,946,372	+		MPMX26_02856	0.22	+0.9
2,946,496	+		MPMX26_02856	0.34	-0.7
2,946,534	+		MPMX26_02856	0.38	+0.2
2,946,708	+		MPMX26_02856	0.55	-1.5
2,946,753	+		MPMX26_02856	0.59	+1.5
2,946,763	+		MPMX26_02856	0.60	-0.8
2,946,805	+		MPMX26_02856	0.65	-0.6
2,946,847	+		MPMX26_02856	0.69	-0.3
2,947,024	+		MPMX26_02856	0.86	-0.8
2,947,024	+		MPMX26_02856	0.86	-0.1
2,947,101	+				-1.1
2,947,111	+				+0.5
2,947,111	+				-0.6
2,947,111	+				+0.5
2,947,119	-				-1.4
2,947,119	-				+1.1
2,947,119	-				+1.1
2,947,119	-				+0.4
2,947,119	-				+0.4
2,947,119	-				+0.1
2,947,119	-				+2.1
2,947,123	+				+0.4
2,947,131	-				-0.2
2,947,147	-				+0.2
2,947,233	-		MPMX26_02857	0.13	-1.2
2,947,240	-		MPMX26_02857	0.15	+0.1
2,947,282	-		MPMX26_02857	0.32	-1.8
2,947,314	-		MPMX26_02857	0.44	+0.1
2,947,325	-		MPMX26_02857	0.49	-1.5
2,947,325	-		MPMX26_02857	0.49	+0.4
2,947,330	-		MPMX26_02857	0.51	-0.6
2,947,360	-		MPMX26_02857	0.62	+0.5
2,947,370	-		MPMX26_02857	0.66	-0.4
2,947,370	-		MPMX26_02857	0.66	-0.5
2,947,404	-		MPMX26_02857	0.80	-1.3
2,947,404	-		MPMX26_02857	0.80	-1.4
2,947,441	-				-0.4
2,947,441	-				+0.1
2,947,463	-				-0.5
2,947,473	-				+0.1
2,947,482	-				-0.3
2,947,487	-				-2.6
2,947,487	-				-0.2
2,947,487	-				+0.5
2,947,487	-				+0.1
2,947,487	-				-0.5
2,947,489	-				-1.1
2,947,489	-				+0.0
2,947,514	-				+0.0
2,947,568	-				+0.1
2,947,583	-				+0.0
2,947,625	-		MPMX26_02858	0.10	+0.1
2,947,625	-		MPMX26_02858	0.10	-0.7
2,947,625	-		MPMX26_02858	0.10	-0.5
2,947,625	-		MPMX26_02858	0.10	-0.8
2,947,625	-		MPMX26_02858	0.10	-0.6
2,947,625	-		MPMX26_02858	0.10	-0.3
2,947,625	-		MPMX26_02858	0.10	+0.4
2,947,625	-		MPMX26_02858	0.10	-0.5
2,947,625	-		MPMX26_02858	0.10	-1.1
2,947,625	-		MPMX26_02858	0.10	-1.1
2,947,625	-		MPMX26_02858	0.10	-0.1
2,947,625	-		MPMX26_02858	0.10	-0.4
2,947,625	-		MPMX26_02858	0.10	-0.1
2,947,625	-		MPMX26_02858	0.10	+0.1
2,947,625	-		MPMX26_02858	0.10	-1.1
2,947,625	-		MPMX26_02858	0.10	-0.5
2,947,625	-		MPMX26_02858	0.10	-0.2
2,947,625	-		MPMX26_02858	0.10	-0.4
2,947,625	-		MPMX26_02858	0.10	-0.4
2,947,625	-		MPMX26_02858	0.10	+0.1
2,947,625	-		MPMX26_02858	0.10	-0.1
2,947,625	-		MPMX26_02858	0.10	-0.2
2,947,625	-		MPMX26_02858	0.10	-0.3
2,947,625	-		MPMX26_02858	0.10	-0.0
2,947,625	-		MPMX26_02858	0.10	+0.0
2,947,625	-		MPMX26_02858	0.10	+0.2
2,947,635	-		MPMX26_02858	0.11	-0.2
2,947,676	-		MPMX26_02858	0.15	+0.1
2,947,739	-		MPMX26_02858	0.21	-0.7
2,947,739	-		MPMX26_02858	0.21	-1.6
2,947,739	-		MPMX26_02858	0.21	-0.9
2,947,739	-		MPMX26_02858	0.21	-1.4
2,947,739	-		MPMX26_02858	0.21	-0.1
2,947,739	-		MPMX26_02858	0.21	-0.5
2,947,739	-		MPMX26_02858	0.21	-0.1
2,947,739	-		MPMX26_02858	0.21	-2.4
2,947,739	-		MPMX26_02858	0.21	-0.4
2,947,739	-		MPMX26_02858	0.21	-1.3
2,947,739	-		MPMX26_02858	0.21	+1.1
2,947,739	-		MPMX26_02858	0.21	-0.7
2,947,739	-		MPMX26_02858	0.21	-0.8
2,947,739	-		MPMX26_02858	0.21	-1.1
2,947,739	-		MPMX26_02858	0.21	-1.2
2,947,739	-		MPMX26_02858	0.21	+0.5
2,947,739	-		MPMX26_02858	0.21	-0.9
2,947,739	-		MPMX26_02858	0.21	-1.4
2,947,739	-		MPMX26_02858	0.21	-0.6
2,947,739	-		MPMX26_02858	0.21	-1.6
2,947,739	-		MPMX26_02858	0.21	+0.3
2,947,853	-		MPMX26_02858	0.32	-2.5
2,947,853	-		MPMX26_02858	0.32	-1.3
2,947,895	-		MPMX26_02858	0.35	-0.9
2,947,898	-		MPMX26_02858	0.36	+0.0
2,947,898	-		MPMX26_02858	0.36	-0.4
2,947,898	-		MPMX26_02858	0.36	-0.5
2,947,925	-		MPMX26_02858	0.38	+0.9
2,947,925	-		MPMX26_02858	0.38	-0.8
2,947,925	-		MPMX26_02858	0.38	-0.2
2,947,925	-		MPMX26_02858	0.38	-1.6
2,947,925	-		MPMX26_02858	0.38	+1.5
2,947,930	-		MPMX26_02858	0.39	-0.3
2,947,949	-		MPMX26_02858	0.41	-0.7
2,947,949	-		MPMX26_02858	0.41	-1.1
2,947,949	-		MPMX26_02858	0.41	-0.5
2,947,949	-		MPMX26_02858	0.41	-0.6
2,947,949	-		MPMX26_02858	0.41	-0.2
2,947,949	-		MPMX26_02858	0.41	+0.0
2,947,959	-		MPMX26_02858	0.41	-0.9
2,947,959	-		MPMX26_02858	0.41	-0.0
2,947,959	-		MPMX26_02858	0.41	-2.0
2,947,959	-		MPMX26_02858	0.41	+0.1
2,947,959	-		MPMX26_02858	0.41	-0.8
2,947,959	-		MPMX26_02858	0.41	-1.8
2,947,996	-		MPMX26_02858	0.45	-0.6
2,947,996	-		MPMX26_02858	0.45	+0.6
2,948,015	-		MPMX26_02858	0.47	-1.4
2,948,015	-		MPMX26_02858	0.47	-1.0
2,948,048	-		MPMX26_02858	0.50	-0.8
2,948,048	-		MPMX26_02858	0.50	-0.8
2,948,048	-		MPMX26_02858	0.50	-0.2
2,948,052	-		MPMX26_02858	0.50	-1.5
2,948,125	-		MPMX26_02858	0.57	-0.2
2,948,125	-		MPMX26_02858	0.57	-0.4
2,948,130	-		MPMX26_02858	0.57	-1.8
2,948,130	-		MPMX26_02858	0.57	-0.2
2,948,130	-		MPMX26_02858	0.57	-0.6
2,948,138	-		MPMX26_02858	0.58	-0.7
2,948,138	-		MPMX26_02858	0.58	-0.1