Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02676

Experiment: TSB with Dermcidin 1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 1 ug/mL
2,770,383	+		MPMX26_02674	0.58	+1.4
2,770,388	+		MPMX26_02674	0.59	-0.6
2,770,399	+		MPMX26_02674	0.61	+0.0
2,770,434	+		MPMX26_02674	0.67	+0.0
2,770,434	+		MPMX26_02674	0.67	-0.0
2,770,439	+		MPMX26_02674	0.68	-0.3
2,770,443	+		MPMX26_02674	0.69	-0.1
2,770,448	+		MPMX26_02674	0.70	-0.3
2,770,454	+		MPMX26_02674	0.71	+0.3
2,770,566	+				-0.0
2,770,583	+				-0.5
2,770,585	+				+0.4
2,770,616	+				+0.2
2,770,633	+				+0.1
2,770,656	+				+0.2
2,770,702	-				+0.8
2,770,703	-				-0.3
2,770,703	-				-2.3
2,770,720	-				+0.1
2,770,753	-		MPMX26_02675	0.15	+0.2
2,770,753	-		MPMX26_02675	0.15	+0.5
2,770,768	-		MPMX26_02675	0.18	-1.6
2,770,768	-		MPMX26_02675	0.18	-0.5
2,770,784	-		MPMX26_02675	0.21	-0.4
2,770,784	-		MPMX26_02675	0.21	-0.1
2,770,844	-		MPMX26_02675	0.31	+0.2
2,770,849	-		MPMX26_02675	0.32	-0.3
2,770,880	-		MPMX26_02675	0.37	-0.7
2,770,882	-		MPMX26_02675	0.37	+0.5
2,770,882	-		MPMX26_02675	0.37	-0.1
2,770,892	-		MPMX26_02675	0.39	+0.0
2,770,933	-		MPMX26_02675	0.46	+0.6
2,770,951	-		MPMX26_02675	0.49	+1.1
2,770,958	-		MPMX26_02675	0.50	+0.3
2,771,011	-		MPMX26_02675	0.59	-0.3
2,771,051	-		MPMX26_02675	0.66	-0.1
2,771,057	-		MPMX26_02675	0.67	-0.8
2,771,066	-		MPMX26_02675	0.68	-0.0
2,771,102	-		MPMX26_02675	0.74	-0.0
2,771,138	-		MPMX26_02675	0.80	+0.7
2,771,140	-		MPMX26_02675	0.81	-1.2
2,771,140	-		MPMX26_02675	0.81	+1.0
2,771,150	-		MPMX26_02675	0.82	+0.2
2,771,233	-				+0.6
2,771,455	+				+1.0
2,771,475	+				+0.6
2,771,480	+				+2.6
2,771,544	+		MPMX26_02676	0.14	+0.2
2,771,544	+		MPMX26_02676	0.14	+0.5
2,771,574	+		MPMX26_02676	0.17	-0.1
2,771,633	+		MPMX26_02676	0.21	-0.6
2,771,711	+		MPMX26_02676	0.28	+1.4
2,771,741	+		MPMX26_02676	0.30	-0.8
2,771,741	+		MPMX26_02676	0.30	-0.0
2,771,799	+		MPMX26_02676	0.35	-0.6
2,771,799	+		MPMX26_02676	0.35	+0.3
2,771,832	+		MPMX26_02676	0.37	-0.7
2,771,840	+		MPMX26_02676	0.38	+1.5
2,771,859	+		MPMX26_02676	0.40	-0.1
2,771,889	+		MPMX26_02676	0.42	+0.7
2,771,889	+		MPMX26_02676	0.42	+0.0
2,771,969	+		MPMX26_02676	0.48	-0.4
2,771,973	+		MPMX26_02676	0.49	-0.1
2,771,973	+		MPMX26_02676	0.49	+1.5
2,772,006	+		MPMX26_02676	0.51	-0.6
2,772,061	+		MPMX26_02676	0.56	-0.0
2,772,171	+		MPMX26_02676	0.65	+1.0
2,772,176	+		MPMX26_02676	0.65	+0.0
2,772,222	+		MPMX26_02676	0.69	+0.5
2,772,231	+		MPMX26_02676	0.69	+0.9
2,772,237	+		MPMX26_02676	0.70	+2.6
2,772,240	+		MPMX26_02676	0.70	-0.4
2,772,315	+		MPMX26_02676	0.76	+1.6
2,772,449	+		MPMX26_02676	0.87	-0.0
2,772,459	+		MPMX26_02676	0.88	+0.7
2,772,473	+		MPMX26_02676	0.89	-1.1
2,772,527	+				+0.1
2,772,542	+				-1.0
2,772,675	-				-0.0
2,772,676	-				-1.5
2,772,701	-				-1.2
2,772,701	-				+0.2
2,772,701	-				-0.5
2,772,729	-				+0.4
2,772,731	-				+0.1
2,772,776	-		MPMX26_02677	0.15	-0.6
2,772,776	-		MPMX26_02677	0.15	+0.3
2,772,786	-		MPMX26_02677	0.16	-0.3
2,772,788	-		MPMX26_02677	0.16	+0.7
2,772,813	-		MPMX26_02677	0.20	+0.2
2,772,813	-		MPMX26_02677	0.20	-0.2
2,772,821	-		MPMX26_02677	0.22	-0.2
2,772,821	-		MPMX26_02677	0.22	+0.0
2,772,821	-		MPMX26_02677	0.22	-0.0
2,772,821	-		MPMX26_02677	0.22	-0.0
2,772,877	-		MPMX26_02677	0.30	+0.2
2,772,884	-		MPMX26_02677	0.31	-0.9
2,772,885	-		MPMX26_02677	0.32	-0.5
2,772,902	-		MPMX26_02677	0.34	+0.0
2,772,948	-		MPMX26_02677	0.41	+0.3
2,772,954	-		MPMX26_02677	0.42	+0.2
2,772,954	-		MPMX26_02677	0.42	+1.6
2,772,954	-		MPMX26_02677	0.42	-0.6
2,772,954	-		MPMX26_02677	0.42	+2.6
2,772,992	-		MPMX26_02677	0.48	+0.1
2,772,992	-		MPMX26_02677	0.48	+0.4
2,772,992	-		MPMX26_02677	0.48	+0.0
2,772,992	-		MPMX26_02677	0.48	-0.0
2,773,009	-		MPMX26_02677	0.51	+0.3
2,773,010	-		MPMX26_02677	0.51	+1.6
2,773,010	-		MPMX26_02677	0.51	+0.8
2,773,015	-		MPMX26_02677	0.52	-0.1
2,773,021	-		MPMX26_02677	0.53	-0.3
2,773,021	-		MPMX26_02677	0.53	+0.3
2,773,022	-		MPMX26_02677	0.53	-0.4
2,773,056	-		MPMX26_02677	0.58	+2.3
2,773,144	-		MPMX26_02677	0.72	-0.0
2,773,155	-		MPMX26_02677	0.74	+0.8
2,773,155	-		MPMX26_02677	0.74	+0.2
2,773,197	-		MPMX26_02677	0.80	-1.1
2,773,216	-		MPMX26_02677	0.83	-0.5
2,773,236	-		MPMX26_02677	0.87	-0.4
2,773,236	-		MPMX26_02677	0.87	+0.3
2,773,246	-		MPMX26_02677	0.88	-1.0
2,773,246	-		MPMX26_02677	0.88	+1.6
2,773,246	-		MPMX26_02677	0.88	+0.5
2,773,246	-		MPMX26_02677	0.88	-0.0
2,773,250	-		MPMX26_02677	0.89	+0.6
2,773,250	-		MPMX26_02677	0.89	+0.2
2,773,261	-				-0.5
2,773,261	-				+0.3
2,773,261	-				-0.1
2,773,261	-				-0.0
2,773,279	-				-0.3
2,773,288	-				-0.2
2,773,433	-		MPMX26_02678	0.15	-0.8
2,773,490	-		MPMX26_02678	0.26	+1.3
2,773,490	-		MPMX26_02678	0.26	-0.1
2,773,490	-		MPMX26_02678	0.26	+0.5
2,773,498	-		MPMX26_02678	0.28	-1.0
2,773,538	-		MPMX26_02678	0.36	-0.8
2,773,540	-		MPMX26_02678	0.36	+0.5
2,773,540	-		MPMX26_02678	0.36	+1.7
2,773,540	-		MPMX26_02678	0.36	+0.6
2,773,540	-		MPMX26_02678	0.36	-2.0
2,773,540	-		MPMX26_02678	0.36	+0.9
2,773,545	-		MPMX26_02678	0.37	+0.1
2,773,561	-		MPMX26_02678	0.41	+2.0
2,773,587	-		MPMX26_02678	0.46	+0.1
2,773,608	-		MPMX26_02678	0.50	+0.6