Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02421

Experiment: TSB with Dermcidin 1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 1 ug/mL
2,505,399	+				+1.0
2,505,554	+				-2.3
2,505,702	+		MPMX26_02420	0.25	-2.5
2,505,725	+		MPMX26_02420	0.28	-0.2
2,505,756	+		MPMX26_02420	0.33	-1.4
2,505,761	+		MPMX26_02420	0.34	+1.0
2,505,771	+		MPMX26_02420	0.35	-3.1
2,505,783	+		MPMX26_02420	0.37	-0.9
2,505,797	+		MPMX26_02420	0.39	-0.2
2,505,938	+		MPMX26_02420	0.59	-1.2
2,505,939	+		MPMX26_02420	0.59	-0.7
2,505,939	+		MPMX26_02420	0.59	-1.4
2,505,939	+		MPMX26_02420	0.59	-0.0
2,505,939	+		MPMX26_02420	0.59	+0.3
2,506,059	+		MPMX26_02420	0.76	-0.4
2,506,059	+		MPMX26_02420	0.76	-0.8
2,506,059	+		MPMX26_02420	0.76	+0.2
2,506,061	+		MPMX26_02420	0.76	-2.5
2,506,113	+		MPMX26_02420	0.84	-1.7
2,506,119	+		MPMX26_02420	0.85	-1.2
2,506,119	+		MPMX26_02420	0.85	-0.6
2,506,119	+		MPMX26_02420	0.85	-0.4
2,506,119	+		MPMX26_02420	0.85	-0.4
2,506,119	+		MPMX26_02420	0.85	-1.2
2,506,119	+		MPMX26_02420	0.85	-1.9
2,506,119	+		MPMX26_02420	0.85	-1.2
2,506,121	+		MPMX26_02420	0.85	-0.6
2,506,329	+				-3.0
2,506,362	+				-3.5
2,506,362	+				-1.5
2,506,362	+				+0.3
2,506,362	+				-2.0
2,506,362	+				-1.5
2,506,455	+		MPMX26_02421	0.21	-1.2
2,506,455	+		MPMX26_02421	0.21	-3.1
2,506,455	+		MPMX26_02421	0.21	+0.6
2,506,455	+		MPMX26_02421	0.21	-2.0
2,506,455	+		MPMX26_02421	0.21	-4.1
2,506,455	+		MPMX26_02421	0.21	-1.1
2,506,503	+		MPMX26_02421	0.27	-1.3
2,506,503	+		MPMX26_02421	0.27	-2.2
2,506,503	+		MPMX26_02421	0.27	-2.1
2,506,503	+		MPMX26_02421	0.27	-3.2
2,506,503	+		MPMX26_02421	0.27	-1.3
2,506,503	+		MPMX26_02421	0.27	-1.1
2,506,503	+		MPMX26_02421	0.27	-1.6
2,506,503	+		MPMX26_02421	0.27	-2.4
2,506,560	+		MPMX26_02421	0.34	-1.7
2,506,560	+		MPMX26_02421	0.34	-2.6
2,506,581	+		MPMX26_02421	0.36	-0.1
2,506,581	+		MPMX26_02421	0.36	-2.9
2,506,581	+		MPMX26_02421	0.36	-1.4
2,506,581	+		MPMX26_02421	0.36	-1.1
2,506,598	+		MPMX26_02421	0.38	-2.3
2,506,666	+		MPMX26_02421	0.47	-1.3
2,506,666	+		MPMX26_02421	0.47	-3.1
2,506,666	+		MPMX26_02421	0.47	-1.7
2,506,666	+		MPMX26_02421	0.47	-1.8
2,506,671	+		MPMX26_02421	0.47	-2.3
2,506,671	+		MPMX26_02421	0.47	-1.8
2,506,671	+		MPMX26_02421	0.47	-1.0
2,506,682	+		MPMX26_02421	0.49	-1.7
2,506,682	+		MPMX26_02421	0.49	-2.0
2,506,682	+		MPMX26_02421	0.49	-1.5
2,506,709	+		MPMX26_02421	0.52	-0.7
2,506,731	+		MPMX26_02421	0.55	-2.6
2,506,812	+		MPMX26_02421	0.65	-2.5
2,506,817	+		MPMX26_02421	0.65	-3.0
2,506,842	+		MPMX26_02421	0.68	-3.0
2,506,842	+		MPMX26_02421	0.68	-3.0
2,506,842	+		MPMX26_02421	0.68	-3.5
2,506,927	+		MPMX26_02421	0.79	-1.5
2,506,932	+		MPMX26_02421	0.79	-1.7
2,506,935	+		MPMX26_02421	0.80	-1.3
2,506,968	+		MPMX26_02421	0.84	-2.7
2,506,968	+		MPMX26_02421	0.84	-2.0
2,506,977	+		MPMX26_02421	0.85	-2.9
2,506,977	+		MPMX26_02421	0.85	-1.4
2,506,977	+		MPMX26_02421	0.85	-3.1
2,506,997	+		MPMX26_02421	0.87	-3.0
2,506,997	+		MPMX26_02421	0.87	-2.7
2,506,997	+		MPMX26_02421	0.87	-0.9
2,506,997	+		MPMX26_02421	0.87	-0.7
2,506,997	+		MPMX26_02421	0.87	-3.2
2,506,997	+		MPMX26_02421	0.87	-2.1
2,506,997	+		MPMX26_02421	0.87	-3.4
2,506,997	+		MPMX26_02421	0.87	-1.5
2,506,997	+		MPMX26_02421	0.87	-2.6
2,506,997	+		MPMX26_02421	0.87	-2.9
2,506,997	+		MPMX26_02421	0.87	-2.0
2,507,069	+				-2.0
2,507,074	+				-1.7
2,507,441	+				-0.1
2,507,479	+				+0.8
2,507,540	+		MPMX26_02423	0.13	+0.0
2,507,574	+		MPMX26_02423	0.25	-0.3
2,507,599	+		MPMX26_02423	0.33	+0.2
2,507,599	+		MPMX26_02423	0.33	-0.8
2,507,620	+		MPMX26_02423	0.41	-0.0
2,507,667	+		MPMX26_02423	0.57	-0.5
2,507,696	+		MPMX26_02423	0.67	+0.3
2,507,709	+		MPMX26_02423	0.72	+0.1
2,507,879	-				-0.5