Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02406

Experiment: TSB with Dermcidin 1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 1 ug/mL
2,490,917	+		MPMX26_02405	0.13	-2.0
2,490,917	+		MPMX26_02405	0.13	-4.1
2,490,917	+		MPMX26_02405	0.13	-5.2
2,490,917	+		MPMX26_02405	0.13	-3.1
2,490,917	+		MPMX26_02405	0.13	-3.4
2,490,917	+		MPMX26_02405	0.13	-3.4
2,490,917	+		MPMX26_02405	0.13	-2.5
2,490,917	+		MPMX26_02405	0.13	-0.6
2,490,917	+		MPMX26_02405	0.13	-3.4
2,490,917	+		MPMX26_02405	0.13	-1.9
2,490,917	+		MPMX26_02405	0.13	-0.8
2,490,932	+		MPMX26_02405	0.14	-3.2
2,490,932	+		MPMX26_02405	0.14	+1.4
2,491,040	+		MPMX26_02405	0.25	-1.2
2,491,045	+		MPMX26_02405	0.25	-0.7
2,491,048	+		MPMX26_02405	0.26	-0.6
2,491,066	+		MPMX26_02405	0.27	-0.9
2,491,088	+		MPMX26_02405	0.29	-0.3
2,491,093	+		MPMX26_02405	0.30	-5.3
2,491,103	+		MPMX26_02405	0.31	-1.6
2,491,141	+		MPMX26_02405	0.35	-1.5
2,491,152	+		MPMX26_02405	0.36	-1.8
2,491,157	+		MPMX26_02405	0.36	-4.4
2,491,157	+		MPMX26_02405	0.36	-2.7
2,491,297	+		MPMX26_02405	0.50	-3.3
2,491,318	+		MPMX26_02405	0.52	-2.6
2,491,318	+		MPMX26_02405	0.52	+1.2
2,491,348	+		MPMX26_02405	0.55	-2.9
2,491,348	+		MPMX26_02405	0.55	+0.6
2,491,348	+		MPMX26_02405	0.55	-2.4
2,491,367	+		MPMX26_02405	0.56	-1.2
2,491,416	+		MPMX26_02405	0.61	-2.2
2,491,453	+		MPMX26_02405	0.65	-2.3
2,491,453	+		MPMX26_02405	0.65	-3.0
2,491,453	+		MPMX26_02405	0.65	-2.5
2,491,460	+		MPMX26_02405	0.65	-3.2
2,491,465	+		MPMX26_02405	0.66	-4.4
2,491,543	+		MPMX26_02405	0.73	-2.2
2,491,647	+		MPMX26_02405	0.83	-3.8
2,491,647	+		MPMX26_02405	0.83	-4.1
2,491,654	+		MPMX26_02405	0.84	-2.2
2,491,654	+		MPMX26_02405	0.84	-0.8
2,491,666	+		MPMX26_02405	0.85	-0.7
2,491,681	+		MPMX26_02405	0.87	-1.8
2,491,681	+		MPMX26_02405	0.87	-4.1
2,491,684	+		MPMX26_02405	0.87	-2.9
2,491,694	+		MPMX26_02405	0.88	-0.5
2,491,694	+		MPMX26_02405	0.88	-1.3
2,491,694	+		MPMX26_02405	0.88	-1.6
2,491,694	+		MPMX26_02405	0.88	-3.6
2,491,694	+		MPMX26_02405	0.88	-3.8
2,491,694	+		MPMX26_02405	0.88	-1.9
2,491,708	+		MPMX26_02405	0.89	-6.4
2,491,718	+				+0.3
2,491,722	+				-1.4
2,491,753	+				-4.2
2,491,901	+				-0.7
2,491,901	+				-0.2
2,491,901	+				-1.6
2,491,917	+				+0.8
2,492,096	+		MPMX26_02406	0.22	-0.2
2,492,133	+		MPMX26_02406	0.25	-0.4
2,492,164	+		MPMX26_02406	0.28	+3.0
2,492,199	+		MPMX26_02406	0.31	-0.4
2,492,204	+		MPMX26_02406	0.32	-1.2
2,492,204	+		MPMX26_02406	0.32	-1.7
2,492,204	+		MPMX26_02406	0.32	-0.0
2,492,204	+		MPMX26_02406	0.32	-1.0
2,492,294	+		MPMX26_02406	0.40	+0.2
2,492,312	+		MPMX26_02406	0.41	-0.5
2,492,365	+		MPMX26_02406	0.46	-1.2
2,492,497	+		MPMX26_02406	0.58	+0.3
2,492,571	+		MPMX26_02406	0.65	+0.2
2,492,606	+		MPMX26_02406	0.68	+0.6
2,492,649	+		MPMX26_02406	0.72	+0.2
2,492,651	+		MPMX26_02406	0.72	-1.0
2,492,666	+		MPMX26_02406	0.73	-0.5
2,492,676	+		MPMX26_02406	0.74	-0.1
2,492,676	+		MPMX26_02406	0.74	+0.2
2,492,702	+		MPMX26_02406	0.76	-0.4
2,492,724	+		MPMX26_02406	0.78	+1.0
2,492,739	+		MPMX26_02406	0.80	+0.3
2,492,739	+		MPMX26_02406	0.80	-0.4
2,492,765	+		MPMX26_02406	0.82	+0.5
2,492,771	+		MPMX26_02406	0.82	+0.8
2,492,808	+		MPMX26_02406	0.86	-0.1
2,492,822	+		MPMX26_02406	0.87	-1.4
2,492,822	+		MPMX26_02406	0.87	+0.8
2,492,822	+		MPMX26_02406	0.87	-0.9
2,492,822	+		MPMX26_02406	0.87	-0.2
2,492,822	+		MPMX26_02406	0.87	-0.4
2,492,822	+		MPMX26_02406	0.87	-0.5
2,492,822	+		MPMX26_02406	0.87	+0.4
2,492,822	+		MPMX26_02406	0.87	-0.9
2,492,822	+		MPMX26_02406	0.87	+0.1
2,492,910	+				-0.7
2,492,914	+				-2.1
2,492,924	+				+0.5
2,492,924	+				-0.2
2,492,924	+				-0.8
2,492,924	+				+0.5
2,493,434	-				+2.6
2,493,616	-				-1.4
2,493,616	-				+2.3
2,493,629	+		MPMX26_02408	0.12	-1.9
2,493,629	+		MPMX26_02408	0.12	-1.0
2,493,629	+		MPMX26_02408	0.12	-2.2
2,493,629	+		MPMX26_02408	0.12	+0.6
2,493,629	+		MPMX26_02408	0.12	-1.1
2,493,629	+		MPMX26_02408	0.12	-1.1
2,493,629	+		MPMX26_02408	0.12	-0.7
2,493,637	-		MPMX26_02408	0.14	+1.0
2,493,660	+		MPMX26_02408	0.20	-0.7
2,493,660	+		MPMX26_02408	0.20	-0.8
2,493,708	+		MPMX26_02408	0.32	-1.6
2,493,713	+		MPMX26_02408	0.33	+0.8
2,493,772	+		MPMX26_02408	0.48	-0.4
2,493,789	+		MPMX26_02408	0.52	-0.3
2,493,831	+		MPMX26_02408	0.63	-1.5
2,493,831	+		MPMX26_02408	0.63	-1.4
2,493,903	+		MPMX26_02408	0.81	-1.0
2,493,903	+		MPMX26_02408	0.81	-0.2
2,493,903	+		MPMX26_02408	0.81	-0.2
2,493,921	+		MPMX26_02408	0.85	-0.1
2,493,940	+				+0.5