Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02403

Experiment: TSB with Dermcidin 1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 1 ug/mL
2,485,329	+		MPMX26_02402	0.24	-0.2
2,485,465	+		MPMX26_02402	0.35	+0.6
2,485,575	+		MPMX26_02402	0.43	+2.2
2,485,618	+		MPMX26_02402	0.47	+2.6
2,485,753	+		MPMX26_02402	0.57	-0.7
2,485,948	+		MPMX26_02402	0.72	-0.0
2,486,031	+		MPMX26_02402	0.79	+0.8
2,486,258	+				-0.5
2,486,391	+				+0.8
2,486,501	+				-1.2
2,486,541	+				+0.6
2,486,550	+				+0.3
2,486,558	+				+1.4
2,486,568	+				+0.7
2,486,685	+		MPMX26_02403	0.11	+0.6
2,486,698	-		MPMX26_02403	0.11	-0.9
2,486,725	+		MPMX26_02403	0.12	-0.7
2,487,104	+		MPMX26_02403	0.22	+0.2
2,487,143	+		MPMX26_02403	0.23	-0.7
2,487,882	-		MPMX26_02403	0.44	-1.0
2,488,289	+		MPMX26_02403	0.55	+1.3
2,489,052	+		MPMX26_02403	0.76	+1.0
2,489,984	-				+0.2
2,490,001	-				-0.1
2,490,011	-				-0.0
2,490,011	-				+0.4
2,490,011	-				-0.8
2,490,011	-				-0.7
2,490,011	-				+0.5
2,490,011	-				+1.9
2,490,011	-				+0.1
2,490,017	-				+0.6
2,490,050	-		MPMX26_02404	0.12	-0.3
2,490,076	-		MPMX26_02404	0.16	-1.3
2,490,103	-		MPMX26_02404	0.20	-0.2
2,490,113	-		MPMX26_02404	0.22	-0.2
2,490,122	-		MPMX26_02404	0.23	+0.6
2,490,158	-		MPMX26_02404	0.28	-0.5
2,490,158	-		MPMX26_02404	0.28	-1.1
2,490,221	-		MPMX26_02404	0.37	+1.3
2,490,221	-		MPMX26_02404	0.37	-0.2
2,490,241	-		MPMX26_02404	0.40	-0.5
2,490,241	-		MPMX26_02404	0.40	+0.5
2,490,248	-		MPMX26_02404	0.41	+0.8
2,490,281	-		MPMX26_02404	0.46	+0.1
2,490,301	-		MPMX26_02404	0.49	+0.4
2,490,301	-		MPMX26_02404	0.49	-0.1
2,490,318	-		MPMX26_02404	0.51	-0.4
2,490,325	-		MPMX26_02404	0.52	+0.2
2,490,332	-		MPMX26_02404	0.53	-0.0
2,490,337	-		MPMX26_02404	0.54	-0.3
2,490,347	-		MPMX26_02404	0.55	-0.6
2,490,412	-		MPMX26_02404	0.65	-0.4
2,490,482	-		MPMX26_02404	0.75	+0.3
2,490,521	-		MPMX26_02404	0.80	-0.2
2,490,602	-				+0.1