Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02321

Experiment: TSB with Dermcidin 1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 1 ug/mL
2,390,407	+		MPMX26_02320	0.15	+0.6
2,390,407	+		MPMX26_02320	0.15	+0.3
2,390,427	+		MPMX26_02320	0.17	+0.4
2,390,428	+		MPMX26_02320	0.18	+0.3
2,390,429	+		MPMX26_02320	0.18	-1.4
2,390,429	+		MPMX26_02320	0.18	-0.4
2,390,429	+		MPMX26_02320	0.18	+0.6
2,390,439	+		MPMX26_02320	0.19	-0.7
2,390,449	+		MPMX26_02320	0.20	-1.0
2,390,449	+		MPMX26_02320	0.20	-0.2
2,390,456	+		MPMX26_02320	0.20	+0.0
2,390,508	+		MPMX26_02320	0.26	+0.6
2,390,582	+		MPMX26_02320	0.33	+0.6
2,390,598	+		MPMX26_02320	0.35	-0.7
2,390,598	+		MPMX26_02320	0.35	+0.6
2,390,642	+		MPMX26_02320	0.39	+2.2
2,390,661	+		MPMX26_02320	0.41	-0.4
2,390,661	+		MPMX26_02320	0.41	+0.6
2,390,682	+		MPMX26_02320	0.43	-0.8
2,390,745	+		MPMX26_02320	0.49	-0.8
2,390,745	+		MPMX26_02320	0.49	+0.3
2,390,751	+		MPMX26_02320	0.50	+0.6
2,390,791	+		MPMX26_02320	0.54	+0.0
2,390,808	+		MPMX26_02320	0.56	+0.3
2,390,808	+		MPMX26_02320	0.56	-0.6
2,390,844	+		MPMX26_02320	0.59	+0.3
2,390,844	+		MPMX26_02320	0.59	+2.6
2,390,855	+		MPMX26_02320	0.61	+0.3
2,390,901	+		MPMX26_02320	0.65	-0.4
2,390,901	+		MPMX26_02320	0.65	+0.6
2,390,901	+		MPMX26_02320	0.65	+0.0
2,390,901	+		MPMX26_02320	0.65	-0.8
2,390,901	+		MPMX26_02320	0.65	+0.6
2,390,901	+		MPMX26_02320	0.65	-1.0
2,390,906	+		MPMX26_02320	0.66	-0.4
2,390,906	+		MPMX26_02320	0.66	-0.2
2,391,006	+		MPMX26_02320	0.76	+0.0
2,391,027	+		MPMX26_02320	0.78	+0.3
2,391,139	+		MPMX26_02320	0.89	-0.7
2,391,149	+				+0.8
2,391,149	+				+0.0
2,391,238	+				+0.2
2,391,238	+				+1.0
2,391,238	+				-0.2
2,391,284	+				-0.8
2,391,284	+				-0.2
2,391,422	+				-1.0
2,391,422	+				-1.6
2,391,422	+				+1.0
2,391,451	+				+0.9
2,391,451	+				-1.0
2,391,472	+				-0.8
2,391,515	+		MPMX26_02321	0.11	-0.1
2,391,611	+		MPMX26_02321	0.18	+0.8
2,391,611	+		MPMX26_02321	0.18	-0.4
2,391,658	+		MPMX26_02321	0.22	-0.2
2,391,658	+		MPMX26_02321	0.22	+0.3
2,391,658	+		MPMX26_02321	0.22	+1.2
2,391,658	+		MPMX26_02321	0.22	-2.1
2,391,658	+		MPMX26_02321	0.22	-1.4
2,391,658	+		MPMX26_02321	0.22	-1.0
2,391,658	+		MPMX26_02321	0.22	+1.0
2,391,658	+		MPMX26_02321	0.22	-1.6
2,391,658	+		MPMX26_02321	0.22	+1.6
2,391,658	+		MPMX26_02321	0.22	-0.6
2,391,658	+		MPMX26_02321	0.22	-0.8
2,391,748	+		MPMX26_02321	0.28	-0.2
2,391,761	+		MPMX26_02321	0.29	-1.5
2,391,784	+		MPMX26_02321	0.31	-2.0
2,391,784	+		MPMX26_02321	0.31	-0.1
2,391,814	+		MPMX26_02321	0.33	-1.0
2,391,814	+		MPMX26_02321	0.33	+0.3
2,391,814	+		MPMX26_02321	0.33	-0.7
2,391,821	+		MPMX26_02321	0.34	-0.3
2,391,821	+		MPMX26_02321	0.34	+0.3
2,391,821	+		MPMX26_02321	0.34	-1.7
2,391,928	+		MPMX26_02321	0.42	-1.0
2,391,928	+		MPMX26_02321	0.42	+0.2
2,391,943	+		MPMX26_02321	0.43	+1.4
2,391,943	+		MPMX26_02321	0.43	-1.0
2,391,943	+		MPMX26_02321	0.43	+0.4
2,392,003	+		MPMX26_02321	0.48	+0.4
2,392,040	+		MPMX26_02321	0.51	-1.1
2,392,045	+		MPMX26_02321	0.51	+0.2
2,392,045	+		MPMX26_02321	0.51	+0.1
2,392,094	+		MPMX26_02321	0.55	+0.1
2,392,232	+		MPMX26_02321	0.65	-0.8
2,392,232	+		MPMX26_02321	0.65	-0.1
2,392,232	+		MPMX26_02321	0.65	-0.9
2,392,232	+		MPMX26_02321	0.65	-1.5
2,392,232	+		MPMX26_02321	0.65	-0.4
2,392,232	+		MPMX26_02321	0.65	-1.3
2,392,232	+		MPMX26_02321	0.65	-0.3
2,392,232	+		MPMX26_02321	0.65	-0.3
2,392,232	+		MPMX26_02321	0.65	-1.5
2,392,232	+		MPMX26_02321	0.65	-0.7
2,392,232	+		MPMX26_02321	0.65	-0.2
2,392,232	+		MPMX26_02321	0.65	+0.5
2,392,232	+		MPMX26_02321	0.65	-0.4
2,392,232	+		MPMX26_02321	0.65	-1.6
2,392,232	+		MPMX26_02321	0.65	+0.2
2,392,232	+		MPMX26_02321	0.65	-0.9
2,392,232	+		MPMX26_02321	0.65	-1.2
2,392,232	+		MPMX26_02321	0.65	+0.2
2,392,232	+		MPMX26_02321	0.65	-0.6
2,392,237	+		MPMX26_02321	0.65	-0.7
2,392,268	+		MPMX26_02321	0.68	-0.0
2,392,268	+		MPMX26_02321	0.68	-1.0
2,392,378	+		MPMX26_02321	0.76	-1.0
2,392,423	+		MPMX26_02321	0.80	+0.2
2,392,466	+		MPMX26_02321	0.83	-0.5
2,392,466	+		MPMX26_02321	0.83	-2.1
2,392,556	+		MPMX26_02321	0.90	-0.6
2,392,604	+				-0.7
2,392,640	+				+0.5
2,392,661	+				-0.3
2,392,672	+				+1.3
2,392,672	+				-1.2
2,392,672	+				-1.8
2,392,672	+				-1.8
2,392,672	+				-1.4
2,393,063	-				+0.2
2,393,065	-				+0.3
2,393,128	-		MPMX26_02322	0.18	+1.2
2,393,167	+		MPMX26_02322	0.26	+0.1
2,393,175	-		MPMX26_02322	0.27	+0.6
2,393,175	-		MPMX26_02322	0.27	-0.5
2,393,175	-		MPMX26_02322	0.27	-1.2
2,393,175	-		MPMX26_02322	0.27	-0.8
2,393,175	-		MPMX26_02322	0.27	-0.0
2,393,175	-		MPMX26_02322	0.27	+0.3
2,393,175	-		MPMX26_02322	0.27	+0.1
2,393,175	-		MPMX26_02322	0.27	+0.1
2,393,175	-		MPMX26_02322	0.27	+1.2
2,393,175	-		MPMX26_02322	0.27	+1.0
2,393,225	-		MPMX26_02322	0.37	-0.1
2,393,230	-		MPMX26_02322	0.38	+0.4
2,393,230	-		MPMX26_02322	0.38	-0.1
2,393,240	-		MPMX26_02322	0.40	-0.6
2,393,240	-		MPMX26_02322	0.40	-0.1
2,393,279	-		MPMX26_02322	0.48	+0.0
2,393,334	-		MPMX26_02322	0.59	+0.1
2,393,334	-		MPMX26_02322	0.59	+0.0
2,393,334	-		MPMX26_02322	0.59	+0.1
2,393,334	-		MPMX26_02322	0.59	+0.3
2,393,340	-		MPMX26_02322	0.60	+0.3
2,393,346	-		MPMX26_02322	0.61	-0.2
2,393,346	-		MPMX26_02322	0.61	-0.1
2,393,346	-		MPMX26_02322	0.61	+0.3
2,393,346	-		MPMX26_02322	0.61	+1.5
2,393,346	-		MPMX26_02322	0.61	+0.4
2,393,346	-		MPMX26_02322	0.61	+0.3
2,393,346	-		MPMX26_02322	0.61	+0.6
2,393,346	-		MPMX26_02322	0.61	-0.9
2,393,353	-		MPMX26_02322	0.63	-1.0
2,393,353	-		MPMX26_02322	0.63	-0.6
2,393,353	-		MPMX26_02322	0.63	-0.4
2,393,384	-		MPMX26_02322	0.69	-0.3
2,393,384	-		MPMX26_02322	0.69	-0.7
2,393,384	-		MPMX26_02322	0.69	+0.3
2,393,419	-		MPMX26_02322	0.76	+1.0
2,393,426	-		MPMX26_02322	0.77	-0.2
2,393,426	-		MPMX26_02322	0.77	-0.1
2,393,426	-		MPMX26_02322	0.77	+0.7
2,393,426	-		MPMX26_02322	0.77	+0.2
2,393,426	-		MPMX26_02322	0.77	-0.7
2,393,426	-		MPMX26_02322	0.77	-0.2
2,393,470	-		MPMX26_02322	0.86	+0.3
2,393,494	-				+0.5
2,393,519	-				-0.5
2,393,519	-				-0.6
2,393,529	-				+0.1
2,393,529	-				-0.8
2,393,529	-				-0.8
2,393,539	-				+0.3
2,393,539	-				+0.2
2,393,539	-				-0.3