Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02232

Experiment: TSB with Dermcidin 1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 1 ug/mL
2,290,102	-				+0.3
2,290,107	-				+0.8
2,290,107	-				+0.5
2,290,107	-				-1.1
2,290,107	-				-0.2
2,290,107	-				+1.3
2,290,117	-				+1.4
2,291,060	-				-2.2
2,291,060	-				+1.4
2,291,079	-				-2.9
2,291,079	-				-2.5
2,291,079	-				-1.4
2,291,129	-				-1.7
2,291,146	-		MPMX26_02232	0.11	-1.2
2,291,153	-		MPMX26_02232	0.12	+0.0
2,291,205	-		MPMX26_02232	0.16	-0.5
2,291,279	-		MPMX26_02232	0.22	-2.6
2,291,290	-		MPMX26_02232	0.23	-1.6
2,291,309	-		MPMX26_02232	0.24	-0.6
2,291,316	-		MPMX26_02232	0.25	-1.0
2,291,316	-		MPMX26_02232	0.25	+0.7
2,291,321	-		MPMX26_02232	0.25	-0.1
2,291,326	-		MPMX26_02232	0.25	+0.0
2,291,331	-		MPMX26_02232	0.26	-1.5
2,291,388	-		MPMX26_02232	0.30	-1.7
2,291,398	-		MPMX26_02232	0.31	+0.3
2,291,398	-		MPMX26_02232	0.31	-1.3
2,291,398	-		MPMX26_02232	0.31	-2.6
2,291,406	-		MPMX26_02232	0.32	-2.4
2,291,414	-		MPMX26_02232	0.33	+0.6
2,291,414	-		MPMX26_02232	0.33	-2.3
2,291,414	-		MPMX26_02232	0.33	-1.8
2,291,429	-		MPMX26_02232	0.34	-1.9
2,291,444	-		MPMX26_02232	0.35	-0.2
2,291,502	-		MPMX26_02232	0.40	-1.3
2,291,507	-		MPMX26_02232	0.40	-0.4
2,291,507	-		MPMX26_02232	0.40	-1.2
2,291,507	-		MPMX26_02232	0.40	-0.8
2,291,507	-		MPMX26_02232	0.40	-2.2
2,291,507	-		MPMX26_02232	0.40	-2.2
2,291,507	-		MPMX26_02232	0.40	-0.7
2,291,507	-		MPMX26_02232	0.40	-2.3
2,291,509	-		MPMX26_02232	0.40	-1.5
2,291,517	-		MPMX26_02232	0.41	+0.6
2,291,571	-		MPMX26_02232	0.45	-0.3
2,291,583	-		MPMX26_02232	0.46	-1.8
2,291,592	-		MPMX26_02232	0.47	-0.2
2,291,602	-		MPMX26_02232	0.48	+0.0
2,291,623	-		MPMX26_02232	0.49	-1.7
2,291,624	-		MPMX26_02232	0.49	-1.1
2,291,624	-		MPMX26_02232	0.49	-1.2
2,291,659	-		MPMX26_02232	0.52	-0.9
2,291,659	-		MPMX26_02232	0.52	-0.6
2,291,659	-		MPMX26_02232	0.52	-1.3
2,291,668	-		MPMX26_02232	0.53	-1.9
2,291,702	-		MPMX26_02232	0.56	-2.8
2,291,741	-		MPMX26_02232	0.59	-1.7
2,291,741	-		MPMX26_02232	0.59	-1.6
2,291,741	-		MPMX26_02232	0.59	-0.6
2,291,741	-		MPMX26_02232	0.59	-2.1
2,291,741	-		MPMX26_02232	0.59	-2.4
2,291,814	-		MPMX26_02232	0.65	-1.3
2,291,881	-		MPMX26_02232	0.70	-1.7
2,291,886	-		MPMX26_02232	0.70	-2.0
2,291,921	-		MPMX26_02232	0.73	-2.3
2,291,959	-		MPMX26_02232	0.76	-0.2
2,292,008	-		MPMX26_02232	0.80	+1.0
2,292,031	-		MPMX26_02232	0.82	+0.3
2,292,048	-		MPMX26_02232	0.83	-0.6
2,292,062	-		MPMX26_02232	0.84	-1.3
2,292,099	-		MPMX26_02232	0.87	-1.7
2,292,132	-		MPMX26_02232	0.90	-0.9
2,292,134	-				-1.2
2,292,134	-				-3.6
2,292,134	-				-2.8
2,292,134	-				+0.0
2,292,134	-				-1.9
2,292,134	-				-1.3
2,292,134	-				-1.2
2,292,134	-				-3.0
2,292,134	-				-2.3
2,292,134	-				-0.2
2,292,134	-				-0.2
2,292,134	-				-2.8
2,292,134	-				-2.7
2,292,134	-				-0.4
2,292,134	-				-2.5
2,292,134	-				-0.6
2,292,134	-				-2.2
2,292,134	-				-1.5
2,292,134	-				-2.2
2,292,134	-				-2.0
2,292,134	-				-1.2
2,292,134	-				-0.3
2,292,134	-				-2.7
2,292,134	-				-3.0
2,292,134	-				-3.4
2,292,134	-				-0.7
2,292,134	-				-1.9
2,292,134	-				-2.3
2,292,144	-				-2.0
2,292,189	-				-1.0
2,292,202	-				+0.0
2,292,221	-				-2.3
2,292,221	-				-2.4
2,292,272	-				-0.2
2,292,277	-				-0.3
2,292,277	-				-1.1
2,292,277	-				+1.0
2,292,293	-				-0.4
2,292,298	-				-0.4
2,292,365	-		MPMX26_02233	0.33	-0.8
2,292,372	-		MPMX26_02233	0.36	+0.5
2,292,410	-		MPMX26_02233	0.51	+0.5
2,292,449	-		MPMX26_02233	0.67	-0.7
2,292,736	-				+0.7
2,292,737	-				-0.4
2,292,737	-				-0.5
2,292,737	-				+0.3
2,292,737	-				-0.5
2,292,737	-				-0.7
2,292,737	-				-0.9
2,292,737	-				-1.3
2,292,752	-				+0.9
2,292,756	-				-0.6
2,292,767	-				+2.0
2,292,781	-				-0.8
2,292,822	-		MPMX26_02234	0.11	-0.4
2,292,822	-		MPMX26_02234	0.11	+0.3
2,292,822	-		MPMX26_02234	0.11	-0.4
2,292,822	-		MPMX26_02234	0.11	-0.2
2,292,822	-		MPMX26_02234	0.11	-1.8
2,292,827	-		MPMX26_02234	0.11	-0.4
2,292,878	-		MPMX26_02234	0.15	+0.9
2,292,878	-		MPMX26_02234	0.15	+0.9
2,292,887	-		MPMX26_02234	0.15	-0.2
2,292,912	-		MPMX26_02234	0.17	-0.7
2,292,922	-		MPMX26_02234	0.18	+0.6
2,292,922	-		MPMX26_02234	0.18	-1.1
2,292,938	+		MPMX26_02234	0.19	+0.5
2,292,946	-		MPMX26_02234	0.20	+0.1
2,292,946	-		MPMX26_02234	0.20	+0.2
2,292,946	-		MPMX26_02234	0.20	+0.5
2,292,946	-		MPMX26_02234	0.20	-0.0
2,292,946	-		MPMX26_02234	0.20	-0.8
2,292,946	-		MPMX26_02234	0.20	-0.4
2,292,946	-		MPMX26_02234	0.20	-0.7
2,292,946	-		MPMX26_02234	0.20	-0.7
2,292,946	-		MPMX26_02234	0.20	-1.3
2,292,956	-		MPMX26_02234	0.20	-0.1
2,292,963	-		MPMX26_02234	0.21	-1.6
2,292,963	-		MPMX26_02234	0.21	-0.7
2,292,990	-		MPMX26_02234	0.23	-0.1
2,292,990	-		MPMX26_02234	0.23	-0.3
2,293,000	-		MPMX26_02234	0.24	+0.2
2,293,000	-		MPMX26_02234	0.24	-0.3
2,293,000	-		MPMX26_02234	0.24	-0.4
2,293,072	-		MPMX26_02234	0.29	-0.7
2,293,093	-		MPMX26_02234	0.30	-0.3
2,293,093	-		MPMX26_02234	0.30	-0.2
2,293,093	-		MPMX26_02234	0.30	-1.2
2,293,112	-		MPMX26_02234	0.31	-1.0
2,293,123	-		MPMX26_02234	0.32	+1.0
2,293,132	+		MPMX26_02234	0.33	+0.4
2,293,133	-		MPMX26_02234	0.33	-0.6
2,293,156	-		MPMX26_02234	0.35	-1.2
2,293,156	-		MPMX26_02234	0.35	-0.2
2,293,156	-		MPMX26_02234	0.35	+0.3