Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02174

Experiment: TSB with Dermcidin 1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 1 ug/mL
2,229,204	+				+0.1
2,229,204	+				-0.2
2,229,214	+				+0.2
2,229,214	+				-0.3
2,229,214	+				-0.1
2,229,230	+				+1.4
2,229,230	+				+0.0
2,229,230	+				-1.3
2,229,230	+				-0.8
2,229,230	+				+0.0
2,229,230	+				-0.6
2,229,230	+				-2.8
2,229,230	+				-0.8
2,229,230	+				+1.0
2,229,230	+				-0.4
2,229,230	+				-0.9
2,229,230	+				+0.3
2,229,230	+				-0.4
2,229,238	-				-0.4
2,229,240	+				-0.5
2,229,246	+				+0.3
2,229,247	+				-0.2
2,229,323	+				-0.6
2,229,347	+				-1.6
2,229,347	+				-2.0
2,229,395	+		MPMX26_02174	0.14	-0.6
2,229,403	+		MPMX26_02174	0.15	-1.3
2,229,411	+		MPMX26_02174	0.16	-0.5
2,229,413	+		MPMX26_02174	0.16	-1.3
2,229,413	+		MPMX26_02174	0.16	-1.2
2,229,413	+		MPMX26_02174	0.16	+0.9
2,229,413	+		MPMX26_02174	0.16	-0.2
2,229,430	+		MPMX26_02174	0.18	-0.8
2,229,436	+		MPMX26_02174	0.19	-1.3
2,229,457	+		MPMX26_02174	0.22	-1.2
2,229,482	+		MPMX26_02174	0.26	-0.3
2,229,526	+		MPMX26_02174	0.32	-1.2
2,229,529	+		MPMX26_02174	0.32	-1.7
2,229,536	+		MPMX26_02174	0.33	-2.5
2,229,536	+		MPMX26_02174	0.33	-1.5
2,229,536	+		MPMX26_02174	0.33	-0.7
2,229,536	+		MPMX26_02174	0.33	-0.9
2,229,536	+		MPMX26_02174	0.33	-1.1
2,229,536	+		MPMX26_02174	0.33	+0.1
2,229,536	+		MPMX26_02174	0.33	+0.8
2,229,536	+		MPMX26_02174	0.33	-3.1
2,229,536	+		MPMX26_02174	0.33	-0.8
2,229,536	+		MPMX26_02174	0.33	-1.3
2,229,536	+		MPMX26_02174	0.33	-1.1
2,229,563	+		MPMX26_02174	0.37	-0.2
2,229,564	+		MPMX26_02174	0.37	+2.0
2,229,572	+		MPMX26_02174	0.38	-0.7
2,229,598	+		MPMX26_02174	0.42	-1.0
2,229,608	+		MPMX26_02174	0.43	-0.8
2,229,642	+		MPMX26_02174	0.48	-0.6
2,229,655	+		MPMX26_02174	0.50	+0.1
2,229,655	+		MPMX26_02174	0.50	-2.0
2,229,655	+		MPMX26_02174	0.50	-1.2
2,229,655	+		MPMX26_02174	0.50	-2.5
2,229,665	+		MPMX26_02174	0.51	+0.4
2,229,675	+		MPMX26_02174	0.53	-1.0
2,229,753	+		MPMX26_02174	0.64	-1.6
2,229,788	+		MPMX26_02174	0.69	-0.6
2,229,794	+		MPMX26_02174	0.70	-2.3
2,229,804	+		MPMX26_02174	0.71	-0.5
2,229,821	+		MPMX26_02174	0.73	-0.9
2,229,821	+		MPMX26_02174	0.73	-2.4
2,229,821	+		MPMX26_02174	0.73	+0.7
2,229,826	+		MPMX26_02174	0.74	-0.6
2,229,826	+		MPMX26_02174	0.74	-1.3
2,229,826	+		MPMX26_02174	0.74	+0.1
2,229,826	+		MPMX26_02174	0.74	-2.7
2,229,826	+		MPMX26_02174	0.74	+1.0
2,229,826	+		MPMX26_02174	0.74	-0.9
2,229,826	+		MPMX26_02174	0.74	-3.0
2,229,826	+		MPMX26_02174	0.74	-1.8
2,229,826	+		MPMX26_02174	0.74	-1.1
2,229,831	+		MPMX26_02174	0.75	-0.2
2,229,831	+		MPMX26_02174	0.75	-2.3
2,229,831	+		MPMX26_02174	0.75	-2.6
2,229,844	+		MPMX26_02174	0.77	-1.6
2,229,844	+		MPMX26_02174	0.77	-0.2
2,229,854	+		MPMX26_02174	0.78	+0.4
2,229,854	+		MPMX26_02174	0.78	-1.8
2,229,854	+		MPMX26_02174	0.78	+0.7
2,229,854	+		MPMX26_02174	0.78	-1.8
2,229,887	+		MPMX26_02174	0.83	-0.7
2,229,905	+		MPMX26_02174	0.85	+0.0
2,229,923	+		MPMX26_02174	0.88	-1.6
2,229,973	+				-1.1
2,229,982	+				-0.1
2,229,982	+				-0.9
2,230,061	+				+0.6
2,230,097	+				-1.3
2,230,097	+				-1.9
2,230,102	+				-1.4
2,230,113	+		MPMX26_02175	0.11	-1.4
2,230,121	+		MPMX26_02175	0.12	-1.2
2,230,121	+		MPMX26_02175	0.12	-0.2
2,230,121	+		MPMX26_02175	0.12	-1.7
2,230,121	+		MPMX26_02175	0.12	-1.7
2,230,121	+		MPMX26_02175	0.12	-0.9
2,230,135	+		MPMX26_02175	0.14	-0.4
2,230,151	+		MPMX26_02175	0.16	+0.0
2,230,151	+		MPMX26_02175	0.16	-0.5
2,230,151	+		MPMX26_02175	0.16	-0.5
2,230,151	+		MPMX26_02175	0.16	-1.7
2,230,151	+		MPMX26_02175	0.16	+1.0
2,230,169	+		MPMX26_02175	0.19	-1.3
2,230,183	+		MPMX26_02175	0.21	-0.4
2,230,201	+		MPMX26_02175	0.24	-1.6
2,230,201	+		MPMX26_02175	0.24	-0.3
2,230,201	+		MPMX26_02175	0.24	-1.7
2,230,201	+		MPMX26_02175	0.24	-0.2
2,230,201	+		MPMX26_02175	0.24	-1.1
2,230,201	+		MPMX26_02175	0.24	+0.6
2,230,201	+		MPMX26_02175	0.24	+0.0
2,230,222	+		MPMX26_02175	0.27	-2.1
2,230,227	+		MPMX26_02175	0.28	-2.9
2,230,241	+		MPMX26_02175	0.30	-0.3
2,230,246	+		MPMX26_02175	0.31	-2.1
2,230,246	+		MPMX26_02175	0.31	+1.6
2,230,281	+		MPMX26_02175	0.36	+0.6
2,230,296	+		MPMX26_02175	0.38	-1.3
2,230,296	+		MPMX26_02175	0.38	-1.9
2,230,296	+		MPMX26_02175	0.38	+0.1
2,230,309	+		MPMX26_02175	0.40	-0.6
2,230,320	+		MPMX26_02175	0.42	-0.1
2,230,340	+		MPMX26_02175	0.45	-2.2
2,230,340	+		MPMX26_02175	0.45	-1.0
2,230,372	+		MPMX26_02175	0.49	-1.1
2,230,379	+		MPMX26_02175	0.51	-1.4
2,230,406	+		MPMX26_02175	0.55	+0.3
2,230,437	+		MPMX26_02175	0.59	+0.0
2,230,472	+		MPMX26_02175	0.64	-0.9
2,230,481	+		MPMX26_02175	0.66	-0.6
2,230,481	+		MPMX26_02175	0.66	-2.9
2,230,569	+		MPMX26_02175	0.79	-0.9
2,230,569	+		MPMX26_02175	0.79	-3.0
2,230,569	+		MPMX26_02175	0.79	-0.6
2,230,575	+		MPMX26_02175	0.80	+1.0
2,230,603	+		MPMX26_02175	0.84	-0.1
2,230,624	+		MPMX26_02175	0.87	-0.6
2,230,642	+		MPMX26_02175	0.90	-1.3
2,230,678	+				-2.5
2,230,680	+				-0.5
2,230,688	+				-0.9
2,230,688	+				-0.6
2,230,688	+				-0.7
2,230,759	+				+0.8
2,230,764	+				-0.3
2,230,764	+				+0.2
2,230,764	+				+0.1
2,230,764	+				-0.1
2,230,764	+				-0.2
2,230,764	+				+1.4
2,230,764	+				+0.4
2,230,764	+				+0.6
2,230,764	+				-0.3
2,230,764	+				+0.2
2,230,764	+				+0.9
2,230,764	+				+0.3
2,230,764	+				-0.2
2,230,764	+				+0.3
2,230,764	+				+0.2
2,230,845	+		MPMX26_02176	0.29	+0.3
2,230,855	+		MPMX26_02176	0.31	-0.4
2,230,860	+		MPMX26_02176	0.33	+0.5
2,230,860	+		MPMX26_02176	0.33	-0.0
2,230,860	+		MPMX26_02176	0.33	-0.5
2,230,934	+		MPMX26_02176	0.51	+0.2
2,230,939	+		MPMX26_02176	0.52	-0.4
2,230,981	+		MPMX26_02176	0.62	-0.4
2,230,991	+		MPMX26_02176	0.64	+0.3