Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02017

Experiment: TSB with Dermcidin 1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 1 ug/mL
2,079,852	+		MPMX26_02015	0.48	-0.3
2,079,866	+		MPMX26_02015	0.52	-1.0
2,079,866	+		MPMX26_02015	0.52	-0.1
2,079,870	+		MPMX26_02015	0.53	-0.2
2,079,876	+		MPMX26_02015	0.55	-0.1
2,079,876	+		MPMX26_02015	0.55	-0.3
2,079,935	+		MPMX26_02015	0.70	+0.1
2,079,935	+		MPMX26_02015	0.70	+0.0
2,079,935	+		MPMX26_02015	0.70	+1.3
2,079,943	+		MPMX26_02015	0.72	+1.0
2,079,943	+		MPMX26_02015	0.72	+1.0
2,079,992	+		MPMX26_02015	0.85	+1.6
2,079,994	+		MPMX26_02015	0.85	+1.0
2,079,996	+		MPMX26_02015	0.86	-0.1
2,079,996	+		MPMX26_02015	0.86	+0.6
2,079,996	+		MPMX26_02015	0.86	-0.0
2,080,016	+				-0.5
2,080,028	+				+0.0
2,080,028	+				+0.3
2,080,028	+				-0.2
2,080,028	+				-1.0
2,080,028	+				+0.0
2,080,224	-		MPMX26_02016	0.20	-0.3
2,081,172	-		MPMX26_02017	0.43	+0.8
2,081,172	-		MPMX26_02017	0.43	+0.4
2,081,216	-		MPMX26_02017	0.48	-0.0
2,081,279	-		MPMX26_02017	0.56	+0.3
2,081,282	-		MPMX26_02017	0.57	+0.3
2,081,282	-		MPMX26_02017	0.57	-0.0
2,081,360	-		MPMX26_02017	0.67	-0.6
2,081,360	-		MPMX26_02017	0.67	+1.0
2,081,360	-		MPMX26_02017	0.67	+1.8
2,081,360	-		MPMX26_02017	0.67	+1.0
2,081,360	-		MPMX26_02017	0.67	+0.1
2,081,360	-		MPMX26_02017	0.67	-1.0
2,081,445	-		MPMX26_02017	0.78	-0.3
2,081,445	-		MPMX26_02017	0.78	+0.5
2,081,445	-		MPMX26_02017	0.78	-0.9
2,081,445	-		MPMX26_02017	0.78	+2.0
2,081,519	-		MPMX26_02017	0.87	+1.4
2,081,583	+				+0.1
2,081,614	+				+0.1
2,081,648	+				+0.9
2,081,802	+				+0.6
2,081,803	+				-0.2
2,081,815	+		MPMX26_02018	0.11	-0.0
2,081,841	+		MPMX26_02018	0.15	-0.5
2,081,841	+		MPMX26_02018	0.15	-0.4
2,081,841	+		MPMX26_02018	0.15	+0.6
2,081,851	+		MPMX26_02018	0.17	-0.3
2,081,866	+		MPMX26_02018	0.19	-0.4
2,081,866	+		MPMX26_02018	0.19	+0.7
2,081,893	+		MPMX26_02018	0.24	-0.1
2,081,898	+		MPMX26_02018	0.24	-0.8
2,081,908	+		MPMX26_02018	0.26	+0.5
2,081,915	+		MPMX26_02018	0.27	-0.4
2,081,945	+		MPMX26_02018	0.32	-0.3
2,081,945	+		MPMX26_02018	0.32	-0.2
2,081,950	+		MPMX26_02018	0.33	+0.1
2,081,950	+		MPMX26_02018	0.33	+1.2
2,082,025	+		MPMX26_02018	0.45	-0.7
2,082,076	+		MPMX26_02018	0.53	-0.1
2,082,109	+		MPMX26_02018	0.58	-0.2
2,082,109	+		MPMX26_02018	0.58	-0.7
2,082,109	+		MPMX26_02018	0.58	-0.9
2,082,109	+		MPMX26_02018	0.58	-0.4
2,082,109	+		MPMX26_02018	0.58	+1.6
2,082,119	+		MPMX26_02018	0.59	-0.3
2,082,119	+		MPMX26_02018	0.59	-0.1
2,082,119	+		MPMX26_02018	0.59	-0.2
2,082,119	+		MPMX26_02018	0.59	-0.8
2,082,119	+		MPMX26_02018	0.59	-0.2
2,082,119	+		MPMX26_02018	0.59	+0.4
2,082,119	+		MPMX26_02018	0.59	+0.7
2,082,210	+		MPMX26_02018	0.74	+1.6
2,082,263	+		MPMX26_02018	0.82	-0.8
2,082,263	+		MPMX26_02018	0.82	+0.4
2,082,297	+		MPMX26_02018	0.88	+0.3
2,082,326	+				-0.1
2,082,326	+				+1.0
2,082,326	+				+3.6
2,082,326	+				-0.6
2,082,326	+				+0.1
2,082,326	+				-0.7
2,082,454	+				-1.1
2,082,545	-		MPMX26_02019	0.29	+4.2
2,082,550	-		MPMX26_02019	0.30	+1.0
2,082,550	-		MPMX26_02019	0.30	-1.2