Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00771

Experiment: TSB with Dermcidin 1 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00769 and MPMX26_00770 are separated by 12 nucleotidesMPMX26_00770 and MPMX26_00771 are separated by 194 nucleotidesMPMX26_00771 and MPMX26_00772 are separated by 135 nucleotides MPMX26_00769: MPMX26_00769 - hypothetical protein, at 814,860 to 815,396 _00769 MPMX26_00770: MPMX26_00770 - RNA-binding protein, at 815,409 to 815,732 _00770 MPMX26_00771: MPMX26_00771 - Ribosomal RNA large subunit methyltransferase E, at 815,927 to 816,577 _00771 MPMX26_00772: MPMX26_00772 - ATP-dependent zinc metalloprotease FtsH, at 816,713 to 818,608 _00772 Position (kb) 815 816 817Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 814.948 kb on - strand, within MPMX26_00769at 814.956 kb on - strand, within MPMX26_00769at 814.956 kb on - strand, within MPMX26_00769at 814.956 kb on - strand, within MPMX26_00769at 814.956 kb on - strand, within MPMX26_00769at 814.956 kb on - strand, within MPMX26_00769at 814.956 kb on - strand, within MPMX26_00769at 814.956 kb on - strand, within MPMX26_00769at 814.956 kb on - strand, within MPMX26_00769at 814.956 kb on - strand, within MPMX26_00769at 814.956 kb on - strand, within MPMX26_00769at 814.958 kb on - strand, within MPMX26_00769at 814.958 kb on - strand, within MPMX26_00769at 814.982 kb on - strand, within MPMX26_00769at 814.982 kb on - strand, within MPMX26_00769at 814.982 kb on - strand, within MPMX26_00769at 814.997 kb on - strand, within MPMX26_00769at 815.013 kb on - strand, within MPMX26_00769at 815.013 kb on - strand, within MPMX26_00769at 815.013 kb on - strand, within MPMX26_00769at 815.013 kb on - strand, within MPMX26_00769at 815.013 kb on - strand, within MPMX26_00769at 815.013 kb on - strand, within MPMX26_00769at 815.013 kb on - strand, within MPMX26_00769at 815.013 kb on - strand, within MPMX26_00769at 815.013 kb on - strand, within MPMX26_00769at 815.013 kb on - strand, within MPMX26_00769at 815.013 kb on - strand, within MPMX26_00769at 815.013 kb on - strand, within MPMX26_00769at 815.013 kb on - strand, within MPMX26_00769at 815.014 kb on - strand, within MPMX26_00769at 815.029 kb on - strand, within MPMX26_00769at 815.058 kb on - strand, within MPMX26_00769at 815.061 kb on - strand, within MPMX26_00769at 815.072 kb on - strand, within MPMX26_00769at 815.115 kb on - strand, within MPMX26_00769at 815.120 kb on - strand, within MPMX26_00769at 815.120 kb on - strand, within MPMX26_00769at 815.135 kb on - strand, within MPMX26_00769at 815.151 kb on - strand, within MPMX26_00769at 815.224 kb on - strand, within MPMX26_00769at 815.278 kb on - strand, within MPMX26_00769at 815.296 kb on - strand, within MPMX26_00769at 815.324 kb on - strand, within MPMX26_00769at 815.336 kb on - strand, within MPMX26_00769at 815.338 kb on - strand, within MPMX26_00769at 815.341 kb on - strand, within MPMX26_00769at 815.341 kb on - strand, within MPMX26_00769at 815.382 kb on - strandat 815.382 kb on - strandat 815.383 kb on - strandat 815.420 kb on - strandat 815.445 kb on - strand, within MPMX26_00770at 815.547 kb on - strand, within MPMX26_00770at 815.555 kb on - strand, within MPMX26_00770at 815.602 kb on - strand, within MPMX26_00770at 815.602 kb on - strand, within MPMX26_00770at 815.648 kb on - strand, within MPMX26_00770at 815.653 kb on - strand, within MPMX26_00770at 815.679 kb on - strand, within MPMX26_00770at 815.681 kb on - strand, within MPMX26_00770at 815.681 kb on - strand, within MPMX26_00770at 815.717 kb on - strandat 815.719 kb on - strandat 815.764 kb on - strandat 815.766 kb on - strandat 815.992 kb on + strand, within MPMX26_00771at 816.034 kb on + strand, within MPMX26_00771at 816.091 kb on + strand, within MPMX26_00771at 816.099 kb on + strand, within MPMX26_00771at 816.119 kb on + strand, within MPMX26_00771at 816.119 kb on + strand, within MPMX26_00771at 816.119 kb on + strand, within MPMX26_00771at 816.119 kb on + strand, within MPMX26_00771at 816.119 kb on + strand, within MPMX26_00771at 816.119 kb on + strand, within MPMX26_00771at 816.122 kb on + strand, within MPMX26_00771at 816.154 kb on + strand, within MPMX26_00771at 816.160 kb on + strand, within MPMX26_00771at 816.160 kb on + strand, within MPMX26_00771at 816.160 kb on + strand, within MPMX26_00771at 816.160 kb on + strand, within MPMX26_00771at 816.160 kb on + strand, within MPMX26_00771at 816.212 kb on + strand, within MPMX26_00771at 816.223 kb on + strand, within MPMX26_00771at 816.319 kb on + strand, within MPMX26_00771at 816.319 kb on + strand, within MPMX26_00771at 816.377 kb on + strand, within MPMX26_00771at 816.401 kb on + strand, within MPMX26_00771at 816.500 kb on + strand, within MPMX26_00771at 816.548 kb on + strandat 816.548 kb on + strandat 816.548 kb on + strandat 816.548 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB with Dermcidin 1 ug/mL
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814,948 - MPMX26_00769 0.16 -0.3
814,956 - MPMX26_00769 0.18 -0.1
814,956 - MPMX26_00769 0.18 +0.6
814,956 - MPMX26_00769 0.18 +0.1
814,956 - MPMX26_00769 0.18 +0.1
814,956 - MPMX26_00769 0.18 -1.8
814,956 - MPMX26_00769 0.18 -0.4
814,956 - MPMX26_00769 0.18 -0.2
814,956 - MPMX26_00769 0.18 -1.3
814,956 - MPMX26_00769 0.18 -0.0
814,956 - MPMX26_00769 0.18 +0.4
814,958 - MPMX26_00769 0.18 +0.3
814,958 - MPMX26_00769 0.18 -0.1
814,982 - MPMX26_00769 0.23 -0.6
814,982 - MPMX26_00769 0.23 -0.0
814,982 - MPMX26_00769 0.23 -0.4
814,997 - MPMX26_00769 0.26 -0.2
815,013 - MPMX26_00769 0.28 -1.1
815,013 - MPMX26_00769 0.28 -0.5
815,013 - MPMX26_00769 0.28 +0.7
815,013 - MPMX26_00769 0.28 -0.3
815,013 - MPMX26_00769 0.28 -0.2
815,013 - MPMX26_00769 0.28 -0.3
815,013 - MPMX26_00769 0.28 -0.3
815,013 - MPMX26_00769 0.28 -0.2
815,013 - MPMX26_00769 0.28 +0.2
815,013 - MPMX26_00769 0.28 +0.0
815,013 - MPMX26_00769 0.28 -1.0
815,013 - MPMX26_00769 0.28 +0.7
815,013 - MPMX26_00769 0.28 -0.9
815,014 - MPMX26_00769 0.29 +0.3
815,029 - MPMX26_00769 0.31 +0.1
815,058 - MPMX26_00769 0.37 +0.5
815,061 - MPMX26_00769 0.37 -0.5
815,072 - MPMX26_00769 0.39 -0.4
815,115 - MPMX26_00769 0.47 +0.0
815,120 - MPMX26_00769 0.48 +0.2
815,120 - MPMX26_00769 0.48 +0.7
815,135 - MPMX26_00769 0.51 -0.3
815,151 - MPMX26_00769 0.54 -1.2
815,224 - MPMX26_00769 0.68 +0.5
815,278 - MPMX26_00769 0.78 +2.6
815,296 - MPMX26_00769 0.81 +0.2
815,324 - MPMX26_00769 0.86 +0.0
815,336 - MPMX26_00769 0.89 -0.0
815,338 - MPMX26_00769 0.89 +0.8
815,341 - MPMX26_00769 0.90 -0.7
815,341 - MPMX26_00769 0.90 -0.5
815,382 - -0.3
815,382 - -0.5
815,383 - +0.0
815,420 - -0.5
815,445 - MPMX26_00770 0.11 +0.1
815,547 - MPMX26_00770 0.43 -1.1
815,555 - MPMX26_00770 0.45 -0.0
815,602 - MPMX26_00770 0.60 -0.1
815,602 - MPMX26_00770 0.60 +0.9
815,648 - MPMX26_00770 0.74 +0.8
815,653 - MPMX26_00770 0.75 -2.0
815,679 - MPMX26_00770 0.83 +0.4
815,681 - MPMX26_00770 0.84 -0.5
815,681 - MPMX26_00770 0.84 -0.8
815,717 - +0.3
815,719 - +1.9
815,764 - -0.1
815,766 - -0.0
815,992 + MPMX26_00771 0.10 -2.6
816,034 + MPMX26_00771 0.16 -2.2
816,091 + MPMX26_00771 0.25 +0.1
816,099 + MPMX26_00771 0.26 -1.7
816,119 + MPMX26_00771 0.29 -1.8
816,119 + MPMX26_00771 0.29 -1.6
816,119 + MPMX26_00771 0.29 -1.9
816,119 + MPMX26_00771 0.29 -1.1
816,119 + MPMX26_00771 0.29 -1.5
816,119 + MPMX26_00771 0.29 -2.2
816,122 + MPMX26_00771 0.30 -1.6
816,154 + MPMX26_00771 0.35 -1.3
816,160 + MPMX26_00771 0.36 -1.5
816,160 + MPMX26_00771 0.36 -2.6
816,160 + MPMX26_00771 0.36 -3.2
816,160 + MPMX26_00771 0.36 +0.2
816,160 + MPMX26_00771 0.36 -1.4
816,212 + MPMX26_00771 0.44 -1.9
816,223 + MPMX26_00771 0.45 -0.5
816,319 + MPMX26_00771 0.60 -0.7
816,319 + MPMX26_00771 0.60 -3.0
816,377 + MPMX26_00771 0.69 -2.4
816,401 + MPMX26_00771 0.73 -1.5
816,500 + MPMX26_00771 0.88 -0.3
816,548 + +0.4
816,548 + -0.7
816,548 + -1.1
816,548 + -0.6

Or see this region's nucleotide sequence