Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00431

Experiment: TSB with Dermcidin 1 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00430 and MPMX26_00431 are separated by 31 nucleotidesMPMX26_00431 and MPMX26_00432 overlap by 1 nucleotides MPMX26_00430: MPMX26_00430 - Histidine--tRNA ligase, at 461,442 to 462,737 _00430 MPMX26_00431: MPMX26_00431 - hypothetical protein, at 462,769 to 463,473 _00431 MPMX26_00432: MPMX26_00432 - Outer membrane protein assembly factor BamB, at 463,473 to 464,621 _00432 Position (kb) 462 463 464Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 462.934 kb on + strand, within MPMX26_00431at 462.934 kb on + strand, within MPMX26_00431at 463.009 kb on + strand, within MPMX26_00431at 463.009 kb on + strand, within MPMX26_00431at 463.051 kb on + strand, within MPMX26_00431at 463.051 kb on + strand, within MPMX26_00431at 463.051 kb on + strand, within MPMX26_00431at 463.156 kb on + strand, within MPMX26_00431at 463.156 kb on + strand, within MPMX26_00431at 463.179 kb on + strand, within MPMX26_00431at 463.185 kb on + strand, within MPMX26_00431at 463.330 kb on + strand, within MPMX26_00431at 463.346 kb on + strand, within MPMX26_00431at 463.352 kb on + strand, within MPMX26_00431at 463.352 kb on + strand, within MPMX26_00431at 463.352 kb on + strand, within MPMX26_00431at 463.352 kb on + strand, within MPMX26_00431at 463.362 kb on + strand, within MPMX26_00431at 463.403 kb on + strandat 463.467 kb on + strandat 463.511 kb on + strandat 463.511 kb on + strandat 463.511 kb on + strandat 463.511 kb on + strandat 463.511 kb on + strandat 463.511 kb on + strandat 463.511 kb on + strandat 463.511 kb on + strandat 463.511 kb on + strandat 463.511 kb on + strandat 463.511 kb on + strandat 463.511 kb on + strandat 463.641 kb on + strand, within MPMX26_00432at 463.674 kb on + strand, within MPMX26_00432at 463.674 kb on + strand, within MPMX26_00432at 463.700 kb on + strand, within MPMX26_00432at 463.709 kb on + strand, within MPMX26_00432at 463.745 kb on + strand, within MPMX26_00432at 463.770 kb on + strand, within MPMX26_00432at 463.770 kb on + strand, within MPMX26_00432at 463.770 kb on + strand, within MPMX26_00432at 463.820 kb on + strand, within MPMX26_00432at 463.820 kb on + strand, within MPMX26_00432at 463.820 kb on + strand, within MPMX26_00432at 463.820 kb on + strand, within MPMX26_00432at 463.827 kb on + strand, within MPMX26_00432at 463.850 kb on + strand, within MPMX26_00432at 463.863 kb on + strand, within MPMX26_00432at 463.863 kb on + strand, within MPMX26_00432at 463.865 kb on + strand, within MPMX26_00432at 463.865 kb on + strand, within MPMX26_00432at 463.865 kb on + strand, within MPMX26_00432at 463.865 kb on + strand, within MPMX26_00432at 463.865 kb on + strand, within MPMX26_00432at 463.865 kb on + strand, within MPMX26_00432at 463.865 kb on + strand, within MPMX26_00432at 463.865 kb on + strand, within MPMX26_00432at 463.865 kb on + strand, within MPMX26_00432at 463.865 kb on + strand, within MPMX26_00432at 463.865 kb on + strand, within MPMX26_00432at 463.865 kb on + strand, within MPMX26_00432at 463.865 kb on + strand, within MPMX26_00432at 463.880 kb on + strand, within MPMX26_00432at 463.880 kb on + strand, within MPMX26_00432at 463.880 kb on + strand, within MPMX26_00432at 463.880 kb on + strand, within MPMX26_00432at 463.880 kb on + strand, within MPMX26_00432at 463.882 kb on + strand, within MPMX26_00432at 463.882 kb on + strand, within MPMX26_00432at 463.883 kb on + strand, within MPMX26_00432at 463.888 kb on + strand, within MPMX26_00432at 463.890 kb on + strand, within MPMX26_00432at 463.890 kb on + strand, within MPMX26_00432at 463.890 kb on + strand, within MPMX26_00432at 463.890 kb on + strand, within MPMX26_00432at 463.900 kb on + strand, within MPMX26_00432at 463.900 kb on + strand, within MPMX26_00432at 463.900 kb on + strand, within MPMX26_00432at 463.900 kb on + strand, within MPMX26_00432at 463.910 kb on + strand, within MPMX26_00432at 463.910 kb on + strand, within MPMX26_00432at 463.910 kb on + strand, within MPMX26_00432at 463.910 kb on + strand, within MPMX26_00432at 463.910 kb on + strand, within MPMX26_00432at 463.910 kb on + strand, within MPMX26_00432at 463.927 kb on + strand, within MPMX26_00432at 463.944 kb on + strand, within MPMX26_00432at 463.965 kb on + strand, within MPMX26_00432at 463.965 kb on + strand, within MPMX26_00432at 463.965 kb on + strand, within MPMX26_00432at 463.972 kb on + strand, within MPMX26_00432at 463.977 kb on + strand, within MPMX26_00432at 463.977 kb on + strand, within MPMX26_00432at 463.977 kb on + strand, within MPMX26_00432at 463.983 kb on + strand, within MPMX26_00432at 463.985 kb on + strand, within MPMX26_00432at 463.985 kb on + strand, within MPMX26_00432at 463.985 kb on + strand, within MPMX26_00432at 463.985 kb on + strand, within MPMX26_00432at 463.985 kb on + strand, within MPMX26_00432at 463.985 kb on + strand, within MPMX26_00432at 463.985 kb on + strand, within MPMX26_00432at 463.985 kb on + strand, within MPMX26_00432at 463.985 kb on + strand, within MPMX26_00432at 463.985 kb on + strand, within MPMX26_00432at 463.985 kb on + strand, within MPMX26_00432at 463.985 kb on + strand, within MPMX26_00432at 463.985 kb on + strand, within MPMX26_00432at 463.985 kb on + strand, within MPMX26_00432at 463.990 kb on + strand, within MPMX26_00432at 463.990 kb on + strand, within MPMX26_00432at 464.010 kb on + strand, within MPMX26_00432at 464.014 kb on + strand, within MPMX26_00432at 464.014 kb on + strand, within MPMX26_00432at 464.015 kb on + strand, within MPMX26_00432at 464.015 kb on + strand, within MPMX26_00432at 464.035 kb on - strand, within MPMX26_00432at 464.047 kb on + strand, within MPMX26_00432at 464.052 kb on + strand, within MPMX26_00432at 464.052 kb on + strand, within MPMX26_00432at 464.059 kb on + strand, within MPMX26_00432at 464.064 kb on + strand, within MPMX26_00432at 464.064 kb on + strand, within MPMX26_00432at 464.064 kb on + strand, within MPMX26_00432at 464.064 kb on + strand, within MPMX26_00432at 464.106 kb on + strand, within MPMX26_00432at 464.106 kb on + strand, within MPMX26_00432at 464.110 kb on + strand, within MPMX26_00432at 464.127 kb on + strand, within MPMX26_00432at 464.137 kb on + strand, within MPMX26_00432at 464.137 kb on + strand, within MPMX26_00432at 464.137 kb on + strand, within MPMX26_00432at 464.137 kb on + strand, within MPMX26_00432at 464.137 kb on + strand, within MPMX26_00432at 464.137 kb on + strand, within MPMX26_00432at 464.137 kb on + strand, within MPMX26_00432at 464.139 kb on + strand, within MPMX26_00432at 464.163 kb on + strand, within MPMX26_00432at 464.163 kb on + strand, within MPMX26_00432at 464.198 kb on + strand, within MPMX26_00432at 464.246 kb on + strand, within MPMX26_00432at 464.276 kb on + strand, within MPMX26_00432at 464.296 kb on + strand, within MPMX26_00432at 464.296 kb on + strand, within MPMX26_00432at 464.296 kb on + strand, within MPMX26_00432at 464.296 kb on + strand, within MPMX26_00432at 464.296 kb on + strand, within MPMX26_00432at 464.296 kb on + strand, within MPMX26_00432at 464.299 kb on + strand, within MPMX26_00432at 464.299 kb on + strand, within MPMX26_00432at 464.299 kb on + strand, within MPMX26_00432at 464.340 kb on + strand, within MPMX26_00432at 464.380 kb on + strand, within MPMX26_00432at 464.406 kb on + strand, within MPMX26_00432at 464.409 kb on + strand, within MPMX26_00432at 464.445 kb on + strand, within MPMX26_00432at 464.445 kb on + strand, within MPMX26_00432at 464.445 kb on + strand, within MPMX26_00432at 464.445 kb on + strand, within MPMX26_00432at 464.446 kb on + strand, within MPMX26_00432at 464.446 kb on + strand, within MPMX26_00432

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB with Dermcidin 1 ug/mL
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462,934 + MPMX26_00431 0.23 +0.2
462,934 + MPMX26_00431 0.23 -1.0
463,009 + MPMX26_00431 0.34 -0.9
463,009 + MPMX26_00431 0.34 -2.4
463,051 + MPMX26_00431 0.40 +0.0
463,051 + MPMX26_00431 0.40 -2.1
463,051 + MPMX26_00431 0.40 -0.7
463,156 + MPMX26_00431 0.55 -1.1
463,156 + MPMX26_00431 0.55 -1.9
463,179 + MPMX26_00431 0.58 -0.5
463,185 + MPMX26_00431 0.59 -0.9
463,330 + MPMX26_00431 0.80 -0.1
463,346 + MPMX26_00431 0.82 -2.4
463,352 + MPMX26_00431 0.83 -1.3
463,352 + MPMX26_00431 0.83 -3.1
463,352 + MPMX26_00431 0.83 -0.2
463,352 + MPMX26_00431 0.83 -0.2
463,362 + MPMX26_00431 0.84 -0.5
463,403 + -0.7
463,467 + -0.1
463,511 + -0.0
463,511 + -0.4
463,511 + +0.3
463,511 + -0.7
463,511 + +0.1
463,511 + -0.4
463,511 + +0.2
463,511 + -0.3
463,511 + -0.0
463,511 + -0.7
463,511 + +0.0
463,511 + -0.7
463,641 + MPMX26_00432 0.15 -0.2
463,674 + MPMX26_00432 0.17 -0.4
463,674 + MPMX26_00432 0.17 -0.9
463,700 + MPMX26_00432 0.20 +0.3
463,709 + MPMX26_00432 0.21 +0.2
463,745 + MPMX26_00432 0.24 +0.2
463,770 + MPMX26_00432 0.26 -1.1
463,770 + MPMX26_00432 0.26 -0.2
463,770 + MPMX26_00432 0.26 +0.5
463,820 + MPMX26_00432 0.30 +0.1
463,820 + MPMX26_00432 0.30 +0.2
463,820 + MPMX26_00432 0.30 +0.4
463,820 + MPMX26_00432 0.30 +0.6
463,827 + MPMX26_00432 0.31 +0.1
463,850 + MPMX26_00432 0.33 -0.4
463,863 + MPMX26_00432 0.34 -0.2
463,863 + MPMX26_00432 0.34 +0.0
463,865 + MPMX26_00432 0.34 -0.1
463,865 + MPMX26_00432 0.34 -1.7
463,865 + MPMX26_00432 0.34 -0.3
463,865 + MPMX26_00432 0.34 +0.0
463,865 + MPMX26_00432 0.34 -0.9
463,865 + MPMX26_00432 0.34 -0.3
463,865 + MPMX26_00432 0.34 -0.1
463,865 + MPMX26_00432 0.34 -0.6
463,865 + MPMX26_00432 0.34 -0.4
463,865 + MPMX26_00432 0.34 +0.1
463,865 + MPMX26_00432 0.34 -0.2
463,865 + MPMX26_00432 0.34 -1.6
463,865 + MPMX26_00432 0.34 +0.5
463,880 + MPMX26_00432 0.35 -0.9
463,880 + MPMX26_00432 0.35 -1.0
463,880 + MPMX26_00432 0.35 -0.5
463,880 + MPMX26_00432 0.35 +0.1
463,880 + MPMX26_00432 0.35 +0.1
463,882 + MPMX26_00432 0.36 -0.3
463,882 + MPMX26_00432 0.36 -1.2
463,883 + MPMX26_00432 0.36 +0.1
463,888 + MPMX26_00432 0.36 +0.8
463,890 + MPMX26_00432 0.36 -0.1
463,890 + MPMX26_00432 0.36 -1.0
463,890 + MPMX26_00432 0.36 +0.7
463,890 + MPMX26_00432 0.36 -0.7
463,900 + MPMX26_00432 0.37 -0.2
463,900 + MPMX26_00432 0.37 +0.5
463,900 + MPMX26_00432 0.37 +0.7
463,900 + MPMX26_00432 0.37 -0.2
463,910 + MPMX26_00432 0.38 -0.3
463,910 + MPMX26_00432 0.38 -1.0
463,910 + MPMX26_00432 0.38 +0.1
463,910 + MPMX26_00432 0.38 +0.0
463,910 + MPMX26_00432 0.38 +0.3
463,910 + MPMX26_00432 0.38 -0.3
463,927 + MPMX26_00432 0.40 +0.4
463,944 + MPMX26_00432 0.41 +0.1
463,965 + MPMX26_00432 0.43 -0.2
463,965 + MPMX26_00432 0.43 -0.1
463,965 + MPMX26_00432 0.43 +0.1
463,972 + MPMX26_00432 0.43 -0.8
463,977 + MPMX26_00432 0.44 +0.2
463,977 + MPMX26_00432 0.44 -0.3
463,977 + MPMX26_00432 0.44 +0.2
463,983 + MPMX26_00432 0.44 -0.6
463,985 + MPMX26_00432 0.45 +0.1
463,985 + MPMX26_00432 0.45 -0.2
463,985 + MPMX26_00432 0.45 -0.2
463,985 + MPMX26_00432 0.45 -0.7
463,985 + MPMX26_00432 0.45 +0.4
463,985 + MPMX26_00432 0.45 +0.4
463,985 + MPMX26_00432 0.45 -0.4
463,985 + MPMX26_00432 0.45 -0.0
463,985 + MPMX26_00432 0.45 -1.5
463,985 + MPMX26_00432 0.45 +0.1
463,985 + MPMX26_00432 0.45 +0.2
463,985 + MPMX26_00432 0.45 -0.1
463,985 + MPMX26_00432 0.45 -0.9
463,985 + MPMX26_00432 0.45 +0.2
463,990 + MPMX26_00432 0.45 -0.3
463,990 + MPMX26_00432 0.45 +0.6
464,010 + MPMX26_00432 0.47 +0.3
464,014 + MPMX26_00432 0.47 +0.1
464,014 + MPMX26_00432 0.47 +0.2
464,015 + MPMX26_00432 0.47 +0.1
464,015 + MPMX26_00432 0.47 -1.9
464,035 - MPMX26_00432 0.49 +2.6
464,047 + MPMX26_00432 0.50 +0.4
464,052 + MPMX26_00432 0.50 -0.5
464,052 + MPMX26_00432 0.50 +0.6
464,059 + MPMX26_00432 0.51 +0.1
464,064 + MPMX26_00432 0.51 -0.7
464,064 + MPMX26_00432 0.51 +0.4
464,064 + MPMX26_00432 0.51 +0.7
464,064 + MPMX26_00432 0.51 -0.6
464,106 + MPMX26_00432 0.55 -0.2
464,106 + MPMX26_00432 0.55 +0.1
464,110 + MPMX26_00432 0.55 -0.3
464,127 + MPMX26_00432 0.57 +0.9
464,137 + MPMX26_00432 0.58 -1.0
464,137 + MPMX26_00432 0.58 -0.2
464,137 + MPMX26_00432 0.58 -0.7
464,137 + MPMX26_00432 0.58 -0.4
464,137 + MPMX26_00432 0.58 +0.6
464,137 + MPMX26_00432 0.58 -0.4
464,137 + MPMX26_00432 0.58 -0.4
464,139 + MPMX26_00432 0.58 -0.4
464,163 + MPMX26_00432 0.60 -0.7
464,163 + MPMX26_00432 0.60 +0.1
464,198 + MPMX26_00432 0.63 +0.2
464,246 + MPMX26_00432 0.67 -0.4
464,276 + MPMX26_00432 0.70 +0.2
464,296 + MPMX26_00432 0.72 +0.4
464,296 + MPMX26_00432 0.72 +0.3
464,296 + MPMX26_00432 0.72 -0.6
464,296 + MPMX26_00432 0.72 -0.4
464,296 + MPMX26_00432 0.72 -0.6
464,296 + MPMX26_00432 0.72 -0.9
464,299 + MPMX26_00432 0.72 -0.2
464,299 + MPMX26_00432 0.72 +0.2
464,299 + MPMX26_00432 0.72 -0.0
464,340 + MPMX26_00432 0.75 +0.5
464,380 + MPMX26_00432 0.79 -0.5
464,406 + MPMX26_00432 0.81 -0.2
464,409 + MPMX26_00432 0.81 -0.3
464,445 + MPMX26_00432 0.85 +0.0
464,445 + MPMX26_00432 0.85 -1.0
464,445 + MPMX26_00432 0.85 -1.5
464,445 + MPMX26_00432 0.85 +0.2
464,446 + MPMX26_00432 0.85 +0.0
464,446 + MPMX26_00432 0.85 -0.2

Or see this region's nucleotide sequence