Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03204

Experiment: TSB with Dermcidin 1 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03203 and MPMX26_03204 are separated by 13 nucleotidesMPMX26_03204 and MPMX26_03205 overlap by 14 nucleotides MPMX26_03203: MPMX26_03203 - hypothetical protein, at 55,269 to 56,345 _03203 MPMX26_03204: MPMX26_03204 - hypothetical protein, at 56,359 to 56,778 _03204 MPMX26_03205: MPMX26_03205 - hypothetical protein, at 56,765 to 57,133 _03205 Position (kb) 56 57Strain fitness (log2 ratio) -2 -1 0 1 2 3at 55.406 kb on - strand, within MPMX26_03203at 55.413 kb on - strand, within MPMX26_03203at 55.425 kb on - strand, within MPMX26_03203at 55.447 kb on + strand, within MPMX26_03203at 55.449 kb on - strand, within MPMX26_03203at 55.455 kb on - strand, within MPMX26_03203at 55.455 kb on - strand, within MPMX26_03203at 55.455 kb on - strand, within MPMX26_03203at 55.455 kb on - strand, within MPMX26_03203at 55.455 kb on - strand, within MPMX26_03203at 55.455 kb on - strand, within MPMX26_03203at 55.455 kb on - strand, within MPMX26_03203at 55.455 kb on - strand, within MPMX26_03203at 55.477 kb on - strand, within MPMX26_03203at 55.479 kb on - strand, within MPMX26_03203at 55.485 kb on - strand, within MPMX26_03203at 55.492 kb on - strand, within MPMX26_03203at 55.510 kb on + strand, within MPMX26_03203at 55.524 kb on - strand, within MPMX26_03203at 55.560 kb on - strand, within MPMX26_03203at 55.561 kb on - strand, within MPMX26_03203at 55.593 kb on - strand, within MPMX26_03203at 55.593 kb on - strand, within MPMX26_03203at 55.593 kb on - strand, within MPMX26_03203at 55.593 kb on - strand, within MPMX26_03203at 55.593 kb on - strand, within MPMX26_03203at 55.593 kb on - strand, within MPMX26_03203at 55.593 kb on - strand, within MPMX26_03203at 55.593 kb on - strand, within MPMX26_03203at 55.593 kb on - strand, within MPMX26_03203at 55.593 kb on - strand, within MPMX26_03203at 55.598 kb on - strand, within MPMX26_03203at 55.601 kb on - strand, within MPMX26_03203at 55.601 kb on - strand, within MPMX26_03203at 55.601 kb on - strand, within MPMX26_03203at 55.669 kb on - strand, within MPMX26_03203at 55.686 kb on - strand, within MPMX26_03203at 55.686 kb on - strand, within MPMX26_03203at 55.695 kb on - strand, within MPMX26_03203at 55.695 kb on - strand, within MPMX26_03203at 55.695 kb on - strand, within MPMX26_03203at 55.695 kb on - strand, within MPMX26_03203at 55.695 kb on - strand, within MPMX26_03203at 55.746 kb on - strand, within MPMX26_03203at 55.757 kb on - strand, within MPMX26_03203at 55.757 kb on - strand, within MPMX26_03203at 55.761 kb on - strand, within MPMX26_03203at 55.767 kb on - strand, within MPMX26_03203at 55.899 kb on - strand, within MPMX26_03203at 55.927 kb on + strand, within MPMX26_03203at 55.935 kb on - strand, within MPMX26_03203at 55.935 kb on - strand, within MPMX26_03203at 55.935 kb on - strand, within MPMX26_03203at 55.935 kb on - strand, within MPMX26_03203at 55.935 kb on - strand, within MPMX26_03203at 55.970 kb on - strand, within MPMX26_03203at 55.989 kb on - strand, within MPMX26_03203at 55.989 kb on - strand, within MPMX26_03203at 55.989 kb on - strand, within MPMX26_03203at 55.989 kb on - strand, within MPMX26_03203at 55.989 kb on - strand, within MPMX26_03203at 55.989 kb on - strand, within MPMX26_03203at 56.079 kb on + strand, within MPMX26_03203at 56.079 kb on + strand, within MPMX26_03203at 56.087 kb on - strand, within MPMX26_03203at 56.132 kb on - strand, within MPMX26_03203at 56.135 kb on - strand, within MPMX26_03203at 56.135 kb on - strand, within MPMX26_03203at 56.140 kb on - strand, within MPMX26_03203at 56.226 kb on + strand, within MPMX26_03203at 56.249 kb on - strandat 56.254 kb on - strandat 56.254 kb on - strandat 56.255 kb on - strandat 56.261 kb on - strandat 56.274 kb on - strandat 56.274 kb on - strandat 56.274 kb on - strandat 56.274 kb on - strandat 56.274 kb on - strandat 56.358 kb on - strandat 56.431 kb on - strand, within MPMX26_03204at 56.431 kb on - strand, within MPMX26_03204at 56.446 kb on - strand, within MPMX26_03204at 56.477 kb on - strand, within MPMX26_03204at 56.480 kb on - strand, within MPMX26_03204at 56.480 kb on - strand, within MPMX26_03204at 56.480 kb on - strand, within MPMX26_03204at 56.487 kb on - strand, within MPMX26_03204at 56.494 kb on - strand, within MPMX26_03204at 56.494 kb on - strand, within MPMX26_03204at 56.494 kb on - strand, within MPMX26_03204at 56.512 kb on - strand, within MPMX26_03204at 56.512 kb on - strand, within MPMX26_03204at 56.512 kb on - strand, within MPMX26_03204at 56.512 kb on - strand, within MPMX26_03204at 56.533 kb on - strand, within MPMX26_03204at 56.533 kb on - strand, within MPMX26_03204at 56.616 kb on - strand, within MPMX26_03204at 56.618 kb on - strand, within MPMX26_03204at 56.619 kb on - strand, within MPMX26_03204at 56.626 kb on - strand, within MPMX26_03204at 56.626 kb on - strand, within MPMX26_03204at 56.639 kb on - strand, within MPMX26_03204at 56.662 kb on - strand, within MPMX26_03204at 56.673 kb on - strand, within MPMX26_03204at 56.675 kb on - strand, within MPMX26_03204at 56.713 kb on - strand, within MPMX26_03204at 56.721 kb on - strand, within MPMX26_03204at 56.725 kb on - strand, within MPMX26_03204at 56.725 kb on - strand, within MPMX26_03204at 56.758 kb on - strandat 56.819 kb on - strand, within MPMX26_03205at 56.822 kb on - strand, within MPMX26_03205at 56.822 kb on - strand, within MPMX26_03205at 56.828 kb on - strand, within MPMX26_03205at 56.828 kb on - strand, within MPMX26_03205at 56.830 kb on - strand, within MPMX26_03205at 56.855 kb on - strand, within MPMX26_03205at 56.873 kb on - strand, within MPMX26_03205at 56.873 kb on - strand, within MPMX26_03205at 56.873 kb on - strand, within MPMX26_03205at 56.873 kb on - strand, within MPMX26_03205at 56.873 kb on - strand, within MPMX26_03205at 56.873 kb on - strand, within MPMX26_03205at 56.878 kb on - strand, within MPMX26_03205at 56.896 kb on - strand, within MPMX26_03205at 56.921 kb on - strand, within MPMX26_03205at 56.921 kb on - strand, within MPMX26_03205at 56.921 kb on - strand, within MPMX26_03205at 56.921 kb on - strand, within MPMX26_03205at 56.921 kb on - strand, within MPMX26_03205at 56.921 kb on - strand, within MPMX26_03205at 56.921 kb on - strand, within MPMX26_03205at 56.921 kb on - strand, within MPMX26_03205at 56.921 kb on - strand, within MPMX26_03205at 56.931 kb on - strand, within MPMX26_03205at 56.974 kb on - strand, within MPMX26_03205at 56.983 kb on - strand, within MPMX26_03205at 57.030 kb on - strand, within MPMX26_03205at 57.030 kb on - strand, within MPMX26_03205at 57.047 kb on - strand, within MPMX26_03205at 57.056 kb on - strand, within MPMX26_03205at 57.066 kb on - strand, within MPMX26_03205at 57.067 kb on + strand, within MPMX26_03205at 57.075 kb on - strand, within MPMX26_03205at 57.075 kb on - strand, within MPMX26_03205at 57.075 kb on - strand, within MPMX26_03205at 57.075 kb on - strand, within MPMX26_03205at 57.075 kb on - strand, within MPMX26_03205at 57.075 kb on - strand, within MPMX26_03205at 57.075 kb on - strand, within MPMX26_03205at 57.075 kb on - strand, within MPMX26_03205at 57.075 kb on - strand, within MPMX26_03205at 57.075 kb on - strand, within MPMX26_03205at 57.075 kb on - strand, within MPMX26_03205at 57.075 kb on - strand, within MPMX26_03205at 57.075 kb on - strand, within MPMX26_03205at 57.075 kb on - strand, within MPMX26_03205at 57.075 kb on - strand, within MPMX26_03205at 57.089 kb on - strand, within MPMX26_03205at 57.105 kb on - strandat 57.115 kb on - strandat 57.133 kb on - strandat 57.146 kb on - strandat 57.173 kb on - strandat 57.183 kb on + strandat 57.191 kb on - strandat 57.191 kb on - strandat 57.191 kb on - strandat 57.191 kb on - strandat 57.191 kb on - strandat 57.191 kb on - strandat 57.191 kb on - strandat 57.191 kb on - strandat 57.191 kb on - strandat 57.191 kb on - strandat 57.191 kb on - strandat 57.191 kb on - strandat 57.191 kb on - strandat 57.207 kb on - strandat 57.208 kb on - strandat 57.210 kb on - strandat 57.218 kb on - strandat 57.237 kb on - strandat 57.284 kb on - strandat 57.291 kb on - strandat 57.291 kb on - strandat 57.298 kb on - strandat 57.298 kb on - strandat 57.332 kb on - strandat 57.332 kb on - strandat 57.332 kb on - strandat 57.332 kb on - strandat 57.388 kb on - strandat 57.556 kb on + strandat 57.562 kb on + strandat 57.562 kb on + strandat 57.562 kb on + strandat 57.570 kb on - strandat 57.570 kb on - strandat 57.570 kb on - strandat 57.774 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB with Dermcidin 1 ug/mL
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55,406 - MPMX26_03203 0.13 +0.5
55,413 - MPMX26_03203 0.13 +0.3
55,425 - MPMX26_03203 0.14 -0.6
55,447 + MPMX26_03203 0.17 +0.1
55,449 - MPMX26_03203 0.17 +0.5
55,455 - MPMX26_03203 0.17 +0.7
55,455 - MPMX26_03203 0.17 +0.1
55,455 - MPMX26_03203 0.17 +0.5
55,455 - MPMX26_03203 0.17 -0.9
55,455 - MPMX26_03203 0.17 -2.0
55,455 - MPMX26_03203 0.17 -0.8
55,455 - MPMX26_03203 0.17 +0.3
55,455 - MPMX26_03203 0.17 -0.5
55,477 - MPMX26_03203 0.19 -0.6
55,479 - MPMX26_03203 0.19 +1.9
55,485 - MPMX26_03203 0.20 -0.2
55,492 - MPMX26_03203 0.21 +0.3
55,510 + MPMX26_03203 0.22 +1.3
55,524 - MPMX26_03203 0.24 +0.2
55,560 - MPMX26_03203 0.27 -1.0
55,561 - MPMX26_03203 0.27 -0.1
55,593 - MPMX26_03203 0.30 -0.4
55,593 - MPMX26_03203 0.30 -0.5
55,593 - MPMX26_03203 0.30 -0.2
55,593 - MPMX26_03203 0.30 +0.4
55,593 - MPMX26_03203 0.30 +0.4
55,593 - MPMX26_03203 0.30 -1.1
55,593 - MPMX26_03203 0.30 -0.4
55,593 - MPMX26_03203 0.30 -0.8
55,593 - MPMX26_03203 0.30 +0.1
55,593 - MPMX26_03203 0.30 +1.1
55,598 - MPMX26_03203 0.31 -0.8
55,601 - MPMX26_03203 0.31 +0.5
55,601 - MPMX26_03203 0.31 +0.3
55,601 - MPMX26_03203 0.31 +0.2
55,669 - MPMX26_03203 0.37 -0.9
55,686 - MPMX26_03203 0.39 +0.5
55,686 - MPMX26_03203 0.39 +1.0
55,695 - MPMX26_03203 0.40 -0.7
55,695 - MPMX26_03203 0.40 -0.6
55,695 - MPMX26_03203 0.40 +0.6
55,695 - MPMX26_03203 0.40 +0.1
55,695 - MPMX26_03203 0.40 +0.3
55,746 - MPMX26_03203 0.44 -2.0
55,757 - MPMX26_03203 0.45 +0.8
55,757 - MPMX26_03203 0.45 -0.1
55,761 - MPMX26_03203 0.46 -0.6
55,767 - MPMX26_03203 0.46 -0.4
55,899 - MPMX26_03203 0.58 +0.3
55,927 + MPMX26_03203 0.61 +1.2
55,935 - MPMX26_03203 0.62 -0.2
55,935 - MPMX26_03203 0.62 -0.8
55,935 - MPMX26_03203 0.62 +0.4
55,935 - MPMX26_03203 0.62 +0.3
55,935 - MPMX26_03203 0.62 -0.9
55,970 - MPMX26_03203 0.65 +0.1
55,989 - MPMX26_03203 0.67 +0.6
55,989 - MPMX26_03203 0.67 +0.5
55,989 - MPMX26_03203 0.67 -0.1
55,989 - MPMX26_03203 0.67 +0.3
55,989 - MPMX26_03203 0.67 -0.1
55,989 - MPMX26_03203 0.67 +1.8
56,079 + MPMX26_03203 0.75 +1.8
56,079 + MPMX26_03203 0.75 +0.9
56,087 - MPMX26_03203 0.76 +0.1
56,132 - MPMX26_03203 0.80 +0.7
56,135 - MPMX26_03203 0.80 -0.3
56,135 - MPMX26_03203 0.80 +0.4
56,140 - MPMX26_03203 0.81 -0.5
56,226 + MPMX26_03203 0.89 +0.1
56,249 - -0.1
56,254 - +0.9
56,254 - +1.6
56,255 - +0.9
56,261 - +0.5
56,274 - -0.1
56,274 - -0.2
56,274 - +2.2
56,274 - +0.1
56,274 - -0.8
56,358 - -0.9
56,431 - MPMX26_03204 0.17 +0.8
56,431 - MPMX26_03204 0.17 -0.0
56,446 - MPMX26_03204 0.21 -0.1
56,477 - MPMX26_03204 0.28 -0.6
56,480 - MPMX26_03204 0.29 +1.4
56,480 - MPMX26_03204 0.29 -1.8
56,480 - MPMX26_03204 0.29 +0.2
56,487 - MPMX26_03204 0.30 +0.5
56,494 - MPMX26_03204 0.32 +1.1
56,494 - MPMX26_03204 0.32 -0.7
56,494 - MPMX26_03204 0.32 +0.2
56,512 - MPMX26_03204 0.36 +0.3
56,512 - MPMX26_03204 0.36 -0.2
56,512 - MPMX26_03204 0.36 +0.2
56,512 - MPMX26_03204 0.36 -0.2
56,533 - MPMX26_03204 0.41 -0.2
56,533 - MPMX26_03204 0.41 -0.3
56,616 - MPMX26_03204 0.61 +3.2
56,618 - MPMX26_03204 0.62 +0.2
56,619 - MPMX26_03204 0.62 -0.5
56,626 - MPMX26_03204 0.64 -0.1
56,626 - MPMX26_03204 0.64 -0.1
56,639 - MPMX26_03204 0.67 +0.1
56,662 - MPMX26_03204 0.72 -0.6
56,673 - MPMX26_03204 0.75 +0.7
56,675 - MPMX26_03204 0.75 +1.4
56,713 - MPMX26_03204 0.84 +0.5
56,721 - MPMX26_03204 0.86 +0.5
56,725 - MPMX26_03204 0.87 +0.5
56,725 - MPMX26_03204 0.87 +0.2
56,758 - +0.2
56,819 - MPMX26_03205 0.15 -1.4
56,822 - MPMX26_03205 0.15 +0.1
56,822 - MPMX26_03205 0.15 -0.5
56,828 - MPMX26_03205 0.17 -1.0
56,828 - MPMX26_03205 0.17 -0.0
56,830 - MPMX26_03205 0.18 -0.5
56,855 - MPMX26_03205 0.24 -0.3
56,873 - MPMX26_03205 0.29 +0.7
56,873 - MPMX26_03205 0.29 -1.1
56,873 - MPMX26_03205 0.29 -0.1
56,873 - MPMX26_03205 0.29 -2.0
56,873 - MPMX26_03205 0.29 +0.2
56,873 - MPMX26_03205 0.29 +0.7
56,878 - MPMX26_03205 0.31 +0.1
56,896 - MPMX26_03205 0.36 -0.5
56,921 - MPMX26_03205 0.42 +0.6
56,921 - MPMX26_03205 0.42 +0.6
56,921 - MPMX26_03205 0.42 +0.1
56,921 - MPMX26_03205 0.42 +0.2
56,921 - MPMX26_03205 0.42 -0.4
56,921 - MPMX26_03205 0.42 -1.6
56,921 - MPMX26_03205 0.42 +0.0
56,921 - MPMX26_03205 0.42 -0.3
56,921 - MPMX26_03205 0.42 +0.4
56,931 - MPMX26_03205 0.45 +1.1
56,974 - MPMX26_03205 0.57 -0.0
56,983 - MPMX26_03205 0.59 +0.6
57,030 - MPMX26_03205 0.72 -0.1
57,030 - MPMX26_03205 0.72 +1.4
57,047 - MPMX26_03205 0.76 -1.1
57,056 - MPMX26_03205 0.79 +1.2
57,066 - MPMX26_03205 0.82 +0.9
57,067 + MPMX26_03205 0.82 +0.6
57,075 - MPMX26_03205 0.84 +0.7
57,075 - MPMX26_03205 0.84 +0.2
57,075 - MPMX26_03205 0.84 +0.7
57,075 - MPMX26_03205 0.84 -0.9
57,075 - MPMX26_03205 0.84 -0.6
57,075 - MPMX26_03205 0.84 -0.4
57,075 - MPMX26_03205 0.84 -0.1
57,075 - MPMX26_03205 0.84 +0.2
57,075 - MPMX26_03205 0.84 +0.6
57,075 - MPMX26_03205 0.84 -0.2
57,075 - MPMX26_03205 0.84 -0.5
57,075 - MPMX26_03205 0.84 +1.1
57,075 - MPMX26_03205 0.84 +0.3
57,075 - MPMX26_03205 0.84 -0.8
57,075 - MPMX26_03205 0.84 +0.5
57,089 - MPMX26_03205 0.88 +0.3
57,105 - +1.4
57,115 - -1.1
57,133 - +1.8
57,146 - +0.7
57,173 - -0.1
57,183 + +0.2
57,191 - +0.1
57,191 - +0.7
57,191 - -0.3
57,191 - +0.6
57,191 - -1.6
57,191 - -0.3
57,191 - +1.8
57,191 - -0.0
57,191 - +0.1
57,191 - -0.4
57,191 - -0.8
57,191 - -2.0
57,191 - +0.2
57,207 - -2.5
57,208 - +0.8
57,210 - +0.5
57,218 - +1.7
57,237 - -0.5
57,284 - -1.7
57,291 - +0.1
57,291 - +0.6
57,298 - -0.7
57,298 - -0.6
57,332 - +1.2
57,332 - -0.4
57,332 - -0.3
57,332 - -0.6
57,388 - +0.2
57,556 + -0.6
57,562 + +1.0
57,562 + -1.7
57,562 + +1.4
57,570 - +1.8
57,570 - +0.8
57,570 - +1.4
57,774 - +0.4

Or see this region's nucleotide sequence