Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02842

Experiment: TSB with Dermcidin 1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 1 ug/mL
2,935,277	+		MPMX26_02840	0.86	-1.5
2,935,285	+		MPMX26_02840	0.86	-1.7
2,935,285	+		MPMX26_02840	0.86	-2.1
2,935,289	+		MPMX26_02840	0.87	-1.4
2,935,289	+		MPMX26_02840	0.87	-1.9
2,935,289	+		MPMX26_02840	0.87	-0.8
2,935,289	+		MPMX26_02840	0.87	-1.4
2,935,289	+		MPMX26_02840	0.87	-0.3
2,935,317	+		MPMX26_02840	0.89	+0.1
2,935,327	+		MPMX26_02840	0.89	-0.1
2,935,327	+		MPMX26_02840	0.89	-1.3
2,935,327	+		MPMX26_02840	0.89	+0.8
2,935,327	+		MPMX26_02840	0.89	-0.2
2,935,327	+		MPMX26_02840	0.89	-1.0
2,935,327	+		MPMX26_02840	0.89	-0.5
2,935,327	+		MPMX26_02840	0.89	-2.0
2,935,327	+		MPMX26_02840	0.89	+0.3
2,935,327	+		MPMX26_02840	0.89	-1.3
2,935,327	+		MPMX26_02840	0.89	-1.1
2,935,332	+		MPMX26_02840	0.90	-0.3
2,935,350	+				-0.6
2,935,386	+				-1.1
2,935,396	+				-0.8
2,935,396	+				-0.2
2,935,396	+				-2.1
2,935,396	+				-0.3
2,935,396	+				-0.4
2,935,419	+				+0.3
2,935,508	+				-0.2
2,935,590	-				+0.3
2,935,643	-		MPMX26_02841	0.16	+1.0
2,935,809	-		MPMX26_02841	0.49	-0.9
2,935,814	-		MPMX26_02841	0.50	-0.3
2,935,976	-		MPMX26_02841	0.82	+0.3
2,936,097	-				+1.5
2,936,246	-				-1.5
2,936,253	-				-0.4
2,936,255	+				-0.1
2,936,261	-				+0.6
2,936,263	-				-0.1
2,936,287	-		MPMX26_02842	0.17	-0.5
2,936,287	-		MPMX26_02842	0.17	-0.2
2,936,287	-		MPMX26_02842	0.17	-0.3
2,936,331	-		MPMX26_02842	0.75	-1.5
2,936,333	-		MPMX26_02842	0.78	-1.4
2,936,358	-				+0.2
2,936,364	+				+0.1
2,936,366	-				-0.2
2,936,366	-				-1.0
2,936,366	-				-0.5
2,936,366	-				-0.0
2,936,366	-				-0.2
2,936,366	-				-0.5
2,936,366	-				-0.5
2,936,373	-				+0.1
2,936,382	-				-1.1
2,936,496	-		MPMX26_02843	0.30	-1.1
2,936,496	-		MPMX26_02843	0.30	-0.7
2,936,496	-		MPMX26_02843	0.30	-0.9
2,936,557	-				-1.5
2,936,567	-				-0.6
2,936,567	-				-0.9
2,936,664	-				+1.1
2,936,713	-				-0.1
2,936,713	-				+0.2
2,936,713	-				-0.7
2,936,732	-				-0.9
2,936,740	-				+1.0
2,936,750	-				-0.1
2,936,755	-		MPMX26_02844	0.11	+0.2
2,936,773	-		MPMX26_02844	0.15	-0.2
2,936,773	-		MPMX26_02844	0.15	+0.5
2,936,773	-		MPMX26_02844	0.15	-0.5
2,936,790	-		MPMX26_02844	0.20	+0.4
2,936,800	-		MPMX26_02844	0.22	+0.0
2,936,800	-		MPMX26_02844	0.22	-0.8
2,936,809	+		MPMX26_02844	0.25	-0.3
2,936,812	-		MPMX26_02844	0.26	+0.4
2,936,817	-		MPMX26_02844	0.27	-0.9
2,936,817	-		MPMX26_02844	0.27	-0.6
2,936,822	-		MPMX26_02844	0.28	-2.0
2,936,831	+		MPMX26_02844	0.31	-0.5
2,936,866	-		MPMX26_02844	0.40	-1.3
2,936,875	+		MPMX26_02844	0.42	-0.5
2,936,883	-		MPMX26_02844	0.44	-3.1
2,936,885	+		MPMX26_02844	0.45	-1.8
2,936,886	+		MPMX26_02844	0.45	-2.7
2,936,893	-		MPMX26_02844	0.47	-3.1
2,936,925	+		MPMX26_02844	0.56	-1.4
2,936,931	-		MPMX26_02844	0.57	-1.8
2,936,933	+		MPMX26_02844	0.58	-1.7
2,936,935	+		MPMX26_02844	0.58	-2.1
2,936,938	+		MPMX26_02844	0.59	-0.7
2,936,938	+		MPMX26_02844	0.59	-2.4
2,936,938	+		MPMX26_02844	0.59	-1.7
2,936,938	+		MPMX26_02844	0.59	-0.4
2,936,938	+		MPMX26_02844	0.59	-0.8
2,936,940	+		MPMX26_02844	0.60	-2.8
2,936,940	+		MPMX26_02844	0.60	-3.5
2,936,943	-		MPMX26_02844	0.60	-1.1
2,936,943	-		MPMX26_02844	0.60	-1.7
2,936,943	-		MPMX26_02844	0.60	-3.2
2,936,945	+		MPMX26_02844	0.61	-0.2
2,936,945	+		MPMX26_02844	0.61	-2.1
2,936,945	+		MPMX26_02844	0.61	-1.3
2,936,945	+		MPMX26_02844	0.61	-1.6
2,936,946	-		MPMX26_02844	0.61	-1.3
2,936,946	-		MPMX26_02844	0.61	-3.1
2,936,946	-		MPMX26_02844	0.61	-2.5
2,936,946	-		MPMX26_02844	0.61	-1.4
2,936,946	-		MPMX26_02844	0.61	-0.5
2,936,946	-		MPMX26_02844	0.61	-1.7
2,936,947	+		MPMX26_02844	0.61	-0.7
2,936,947	+		MPMX26_02844	0.61	-2.2
2,936,947	+		MPMX26_02844	0.61	-1.3
2,936,947	+		MPMX26_02844	0.61	-1.4
2,936,947	+		MPMX26_02844	0.61	-2.4
2,936,947	+		MPMX26_02844	0.61	-1.7
2,936,947	+		MPMX26_02844	0.61	-0.0
2,936,947	+		MPMX26_02844	0.61	-1.0
2,936,947	+		MPMX26_02844	0.61	-1.0
2,936,947	+		MPMX26_02844	0.61	-2.0
2,936,947	+		MPMX26_02844	0.61	-1.5
2,936,947	+		MPMX26_02844	0.61	+0.0
2,936,947	+		MPMX26_02844	0.61	-1.3
2,936,947	+		MPMX26_02844	0.61	+0.5
2,936,947	+		MPMX26_02844	0.61	+0.2
2,936,947	+		MPMX26_02844	0.61	-1.9
2,936,947	+		MPMX26_02844	0.61	-0.8
2,936,947	+		MPMX26_02844	0.61	+0.2
2,936,947	+		MPMX26_02844	0.61	-0.5
2,936,947	+		MPMX26_02844	0.61	-2.1
2,936,947	+		MPMX26_02844	0.61	-2.4
2,936,947	+		MPMX26_02844	0.61	-2.5
2,936,947	+		MPMX26_02844	0.61	-0.5
2,936,947	+		MPMX26_02844	0.61	-0.5
2,936,947	+		MPMX26_02844	0.61	-2.3
2,936,947	+		MPMX26_02844	0.61	-0.9
2,936,947	+		MPMX26_02844	0.61	-1.2
2,936,947	+		MPMX26_02844	0.61	-2.5
2,936,947	+		MPMX26_02844	0.61	-2.0
2,936,948	-		MPMX26_02844	0.62	-1.1
2,936,955	-		MPMX26_02844	0.63	-2.1
2,936,955	-		MPMX26_02844	0.63	-2.2
2,936,955	-		MPMX26_02844	0.63	-2.3
2,936,955	-		MPMX26_02844	0.63	-0.8
2,936,955	-		MPMX26_02844	0.63	-3.6
2,936,955	-		MPMX26_02844	0.63	-1.9
2,936,955	-		MPMX26_02844	0.63	-1.8
2,936,955	-		MPMX26_02844	0.63	-1.9
2,936,955	-		MPMX26_02844	0.63	-1.5
2,936,955	-		MPMX26_02844	0.63	-1.9
2,936,955	-		MPMX26_02844	0.63	-2.2
2,936,955	-		MPMX26_02844	0.63	-2.9
2,936,955	-		MPMX26_02844	0.63	-2.7
2,936,955	-		MPMX26_02844	0.63	-2.5
2,936,955	-		MPMX26_02844	0.63	-0.2
2,936,955	-		MPMX26_02844	0.63	-0.3
2,936,955	-		MPMX26_02844	0.63	-2.3
2,936,955	-		MPMX26_02844	0.63	-0.5
2,936,955	-		MPMX26_02844	0.63	-1.5
2,936,955	-		MPMX26_02844	0.63	-1.8
2,936,955	-		MPMX26_02844	0.63	-1.4
2,936,955	-		MPMX26_02844	0.63	-0.3
2,936,955	-		MPMX26_02844	0.63	-1.5
2,936,955	-		MPMX26_02844	0.63	-0.4
2,936,955	-		MPMX26_02844	0.63	-1.0
2,936,955	-		MPMX26_02844	0.63	-0.9
2,936,967	-		MPMX26_02844	0.67	+0.2
2,936,977	-		MPMX26_02844	0.69	-2.1
2,936,977	-		MPMX26_02844	0.69	-2.7
2,936,983	+		MPMX26_02844	0.71	-1.6
2,936,991	-		MPMX26_02844	0.73	-1.8
2,936,991	-		MPMX26_02844	0.73	-1.0
2,936,995	-		MPMX26_02844	0.74	-1.0
2,937,015	+		MPMX26_02844	0.79	-1.9
2,937,023	-		MPMX26_02844	0.81	+0.4
2,937,024	-		MPMX26_02844	0.82	-0.4
2,937,047	+		MPMX26_02844	0.88	-1.1
2,937,047	+		MPMX26_02844	0.88	-0.5
2,937,048	-		MPMX26_02844	0.88	-1.9
2,937,050	-		MPMX26_02844	0.89	-1.9
2,937,055	-				-2.3
2,937,077	+				-0.9
2,937,080	+				-1.4
2,937,088	-				-1.1
2,937,094	+				+0.7
2,937,100	-				-1.4
2,937,101	-				-0.6
2,937,102	+				-0.1
2,937,102	-				-0.5
2,937,110	-				-1.0
2,937,112	+				-0.6
2,937,112	+				-1.1
2,937,120	-				-1.5
2,937,120	-				-0.7
2,937,122	-				-0.3
2,937,122	-				-1.6
2,937,134	-				+0.3
2,937,135	-				-0.1
2,937,138	+				-3.0
2,937,138	+				+0.6
2,937,138	+				-1.3
2,937,138	+				+0.2
2,937,138	+				-0.8
2,937,138	+				-1.2
2,937,138	+				-0.2
2,937,138	+				-0.6
2,937,138	+				-1.2
2,937,138	+				-1.6
2,937,146	-				-0.8
2,937,146	-				+1.6
2,937,146	-				-1.1
2,937,146	-				-0.6
2,937,146	-				-0.0
2,937,146	-				-2.3
2,937,146	-				-1.1
2,937,210	+				-0.1
2,937,255	+				-2.6
2,937,270	+		MPMX26_02845	0.12	-1.1
2,937,275	+		MPMX26_02845	0.13	-1.0
2,937,275	+		MPMX26_02845	0.13	-0.9
2,937,275	+		MPMX26_02845	0.13	-0.9
2,937,275	+		MPMX26_02845	0.13	+0.8
2,937,275	+		MPMX26_02845	0.13	-0.2
2,937,275	+		MPMX26_02845	0.13	-0.6
2,937,275	+		MPMX26_02845	0.13	-0.9
2,937,275	+		MPMX26_02845	0.13	-0.8
2,937,275	+		MPMX26_02845	0.13	+1.3
2,937,275	+		MPMX26_02845	0.13	-0.4
2,937,275	+		MPMX26_02845	0.13	-0.7
2,937,275	+		MPMX26_02845	0.13	-0.0
2,937,275	+		MPMX26_02845	0.13	-0.2
2,937,275	+		MPMX26_02845	0.13	+0.7
2,937,275	+		MPMX26_02845	0.13	+1.2
2,937,275	+		MPMX26_02845	0.13	-2.0
2,937,275	+		MPMX26_02845	0.13	-0.1
2,937,275	+		MPMX26_02845	0.13	-1.1
2,937,275	+		MPMX26_02845	0.13	+0.6
2,937,275	+		MPMX26_02845	0.13	+0.2
2,937,275	+		MPMX26_02845	0.13	-0.5
2,937,328	+		MPMX26_02845	0.22	-0.8
2,937,328	+		MPMX26_02845	0.22	-0.9
2,937,336	-		MPMX26_02845	0.23	+0.5
2,937,337	+		MPMX26_02845	0.24	-0.5