Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02537

Experiment: TSB with Dermcidin 1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 1 ug/mL
2,623,194	+		MPMX26_02534	0.65	+0.1
2,623,249	+		MPMX26_02534	0.70	-0.0
2,623,254	+		MPMX26_02534	0.70	-0.5
2,623,259	+		MPMX26_02534	0.71	-0.8
2,623,289	+		MPMX26_02534	0.73	+1.1
2,623,423	+		MPMX26_02534	0.84	-1.1
2,623,443	+		MPMX26_02534	0.86	-0.6
2,623,454	+		MPMX26_02534	0.87	-0.0
2,623,454	+		MPMX26_02534	0.87	+0.0
2,623,555	+				+0.2
2,623,665	-		MPMX26_02535	0.35	+1.1
2,623,673	-		MPMX26_02535	0.41	-0.2
2,623,701	-		MPMX26_02535	0.60	-1.1
2,623,710	-		MPMX26_02535	0.66	-0.5
2,623,764	-				+0.8
2,624,252	-				-0.5
2,624,298	-				+0.4
2,624,298	-				-0.9
2,624,299	-				-0.3
2,624,319	-				+1.1
2,624,319	-				-0.0
2,624,319	-				+1.1
2,624,319	-				-0.1
2,624,319	-				+1.0
2,624,319	-				+0.4
2,624,319	-				-0.1
2,624,324	-				+0.6
2,624,342	-				+0.1
2,624,352	-				+0.8
2,624,519	-		MPMX26_02537	0.17	+1.2
2,624,570	-		MPMX26_02537	0.19	+1.4
2,624,579	-		MPMX26_02537	0.20	+0.5
2,624,579	-		MPMX26_02537	0.20	-0.5
2,624,579	-		MPMX26_02537	0.20	+0.2
2,624,579	-		MPMX26_02537	0.20	+1.9
2,624,579	-		MPMX26_02537	0.20	+1.3
2,624,579	-		MPMX26_02537	0.20	+0.4
2,624,579	-		MPMX26_02537	0.20	+0.2
2,624,579	-		MPMX26_02537	0.20	-0.0
2,624,579	-		MPMX26_02537	0.20	+0.5
2,624,589	-		MPMX26_02537	0.20	+0.6
2,624,700	-		MPMX26_02537	0.26	+1.5
2,624,723	-		MPMX26_02537	0.27	+0.7
2,624,792	-		MPMX26_02537	0.31	-0.6
2,624,872	-		MPMX26_02537	0.35	+0.4
2,624,903	-		MPMX26_02537	0.36	-0.2
2,624,906	-		MPMX26_02537	0.36	+0.1
2,624,925	-		MPMX26_02537	0.37	+2.1
2,624,925	-		MPMX26_02537	0.37	-0.0
2,625,042	-		MPMX26_02537	0.43	+0.7
2,625,042	-		MPMX26_02537	0.43	+1.4
2,625,042	-		MPMX26_02537	0.43	-0.2
2,625,042	-		MPMX26_02537	0.43	+1.2
2,625,042	-		MPMX26_02537	0.43	+0.3
2,625,042	-		MPMX26_02537	0.43	-0.2
2,625,042	-		MPMX26_02537	0.43	+0.3
2,625,042	-		MPMX26_02537	0.43	+1.7
2,625,042	-		MPMX26_02537	0.43	+0.8
2,625,042	-		MPMX26_02537	0.43	+0.4
2,625,042	-		MPMX26_02537	0.43	+1.8
2,625,066	-		MPMX26_02537	0.45	-0.6
2,625,095	-		MPMX26_02537	0.46	+0.3
2,625,122	-		MPMX26_02537	0.48	+0.7
2,625,129	-		MPMX26_02537	0.48	+2.8
2,625,130	-		MPMX26_02537	0.48	+0.8
2,625,200	-		MPMX26_02537	0.51	+1.0
2,625,200	-		MPMX26_02537	0.51	-0.2
2,625,210	-		MPMX26_02537	0.52	+0.2
2,625,210	-		MPMX26_02537	0.52	+0.7
2,625,210	-		MPMX26_02537	0.52	+1.1
2,625,210	-		MPMX26_02537	0.52	+1.0
2,625,210	-		MPMX26_02537	0.52	+0.2
2,625,210	-		MPMX26_02537	0.52	+0.4
2,625,210	-		MPMX26_02537	0.52	+0.6
2,625,270	-		MPMX26_02537	0.55	+0.4
2,625,345	-		MPMX26_02537	0.59	+1.2
2,625,426	-		MPMX26_02537	0.63	+0.7
2,625,428	-		MPMX26_02537	0.63	+0.4
2,625,441	-		MPMX26_02537	0.64	+0.8
2,625,446	-		MPMX26_02537	0.64	+0.3
2,625,498	-		MPMX26_02537	0.67	-0.8
2,625,513	-		MPMX26_02537	0.67	+1.0
2,625,528	-		MPMX26_02537	0.68	+0.6
2,625,557	-		MPMX26_02537	0.70	+0.4
2,625,567	-		MPMX26_02537	0.70	+0.5
2,625,708	-		MPMX26_02537	0.77	-0.4
2,625,713	-		MPMX26_02537	0.78	+0.2
2,625,713	-		MPMX26_02537	0.78	+0.6
2,625,713	-		MPMX26_02537	0.78	+0.5
2,625,713	-		MPMX26_02537	0.78	-0.2
2,625,740	-		MPMX26_02537	0.79	-0.2
2,625,740	-		MPMX26_02537	0.79	+0.8
2,625,866	-		MPMX26_02537	0.85	+1.7
2,625,866	-		MPMX26_02537	0.85	-0.2
2,625,972	-				-0.3
2,626,133	-				+0.8
2,626,239	-				+0.2
2,626,337	-				+1.2
2,626,339	+				+1.8
2,626,438	-				+1.2
2,626,443	-				+0.5
2,626,444	-				+0.2
2,626,454	-				-0.7
2,626,462	-		MPMX26_02538	0.11	+0.6
2,626,462	-		MPMX26_02538	0.11	+0.2
2,626,483	-		MPMX26_02538	0.18	+0.8
2,626,491	-		MPMX26_02538	0.20	+1.2
2,626,508	-		MPMX26_02538	0.25	+0.0
2,626,508	-		MPMX26_02538	0.25	-0.3
2,626,510	-		MPMX26_02538	0.26	-0.0
2,626,510	-		MPMX26_02538	0.26	+0.2
2,626,532	-		MPMX26_02538	0.32	+0.2
2,626,553	-		MPMX26_02538	0.39	+0.3
2,626,766	-				+0.3
2,626,766	-				+0.8
2,626,876	+				+0.5
2,626,920	+				-1.8
2,626,920	+				+0.6
2,626,930	+				-1.1
2,626,930	+				-0.7
2,626,930	+				-0.2
2,626,953	+				-0.0
2,626,964	+		MPMX26_02539	0.12	-0.3
2,626,969	+		MPMX26_02539	0.13	+0.4
2,626,969	+		MPMX26_02539	0.13	-1.9
2,626,969	+		MPMX26_02539	0.13	+0.1
2,626,992	+		MPMX26_02539	0.19	-0.3
2,626,992	+		MPMX26_02539	0.19	-0.8
2,626,992	+		MPMX26_02539	0.19	-0.7
2,626,992	+		MPMX26_02539	0.19	+0.1
2,626,992	+		MPMX26_02539	0.19	+0.5
2,627,026	+		MPMX26_02539	0.27	-0.0
2,627,036	+		MPMX26_02539	0.29	+0.1
2,627,036	+		MPMX26_02539	0.29	-0.6
2,627,052	+		MPMX26_02539	0.33	-0.4
2,627,135	+		MPMX26_02539	0.52	+0.1