Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01324

Experiment: TSB with Dermcidin 1 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01323 and MPMX26_01324 are separated by 37 nucleotidesMPMX26_01324 and MPMX26_01325 are separated by 82 nucleotidesMPMX26_01325 and MPMX26_01326 are separated by 34 nucleotidesMPMX26_01326 and MPMX26_01327 are separated by 68 nucleotides MPMX26_01323: MPMX26_01323 - Chaperone protein HscA, at 1,398,741 to 1,400,600 _01323 MPMX26_01324: MPMX26_01324 - Co-chaperone protein HscB, at 1,400,638 to 1,401,153 _01324 MPMX26_01325: MPMX26_01325 - Iron-binding protein IscA, at 1,401,236 to 1,401,556 _01325 MPMX26_01326: MPMX26_01326 - Iron-sulfur cluster assembly scaffold protein IscU, at 1,401,591 to 1,401,977 _01326 MPMX26_01327: MPMX26_01327 - Cysteine desulfurase IscS, at 1,402,046 to 1,403,263 _01327 Position (kb) 1400 1401 1402Strain fitness (log2 ratio) -1 0 1at 1401.592 kb on - strandat 1401.592 kb on - strandat 1401.597 kb on - strandat 1402.059 kb on - strandat 1402.059 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB with Dermcidin 1 ug/mL
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1,401,592 - -0.4
1,401,592 - -0.8
1,401,597 - -0.4
1,402,059 - -1.5
1,402,059 - +0.0

Or see this region's nucleotide sequence