Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01075
Experiment: TSB with Dermcidin 1 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | TSB with Dermcidin 1 ug/mL |
---|---|---|---|---|---|
remove | |||||
1,142,198 | + | -0.7 | |||
1,142,245 | + | +0.9 | |||
1,142,246 | + | +0.3 | |||
1,142,315 | + | -0.3 | |||
1,142,331 | + | -0.1 | |||
1,143,885 | - | MPMX26_01076 | 0.22 | -1.5 | |
1,143,895 | - | MPMX26_01076 | 0.23 | +0.5 | |
1,143,897 | - | MPMX26_01076 | 0.23 | +0.3 | |
1,143,897 | - | MPMX26_01076 | 0.23 | -0.3 | |
1,143,948 | - | MPMX26_01076 | 0.26 | +1.3 | |
1,143,975 | - | MPMX26_01076 | 0.28 | +2.3 | |
1,144,002 | - | MPMX26_01076 | 0.30 | +2.1 | |
1,144,056 | - | MPMX26_01076 | 0.34 | -0.2 | |
1,144,056 | - | MPMX26_01076 | 0.34 | +1.2 | |
1,144,242 | - | MPMX26_01076 | 0.47 | -0.1 | |
1,144,258 | - | MPMX26_01076 | 0.48 | +0.8 | |
1,144,279 | - | MPMX26_01076 | 0.49 | -0.3 | |
1,144,325 | + | MPMX26_01076 | 0.52 | +0.8 |
Or see this region's nucleotide sequence