Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03040 and MPMX26_03041 are separated by 439 nucleotides MPMX26_03041 and MPMX26_03042 are separated by 99 nucleotides MPMX26_03042 and MPMX26_03043 are separated by 75 nucleotides
MPMX26_03040: MPMX26_03040 - 16S ribosomal RNA, at 3,159,467 to 3,160,999
_03040
MPMX26_03041: MPMX26_03041 - Peptidyl-prolyl cis-trans isomerase A, at 3,161,439 to 3,162,008
_03041
MPMX26_03042: MPMX26_03042 - hypothetical protein, at 3,162,108 to 3,162,773
_03042
MPMX26_03043: MPMX26_03043 - Carboxylesterase NlhH, at 3,162,849 to 3,163,919
_03043
Position (kb)
3161
3162
3163 Strain fitness (log2 ratio)
-1
0
1
2 at 3161.273 kb on - strand at 3161.278 kb on - strand at 3161.280 kb on - strand at 3161.315 kb on - strand at 3161.315 kb on - strand at 3161.315 kb on - strand at 3161.375 kb on - strand at 3161.512 kb on + strand, within MPMX26_03041 at 3161.525 kb on - strand, within MPMX26_03041 at 3161.525 kb on - strand, within MPMX26_03041 at 3161.525 kb on - strand, within MPMX26_03041 at 3161.525 kb on - strand, within MPMX26_03041 at 3161.534 kb on - strand, within MPMX26_03041 at 3161.585 kb on - strand, within MPMX26_03041 at 3161.585 kb on - strand, within MPMX26_03041 at 3161.585 kb on - strand, within MPMX26_03041 at 3161.685 kb on - strand, within MPMX26_03041 at 3161.733 kb on - strand, within MPMX26_03041 at 3161.735 kb on + strand, within MPMX26_03041 at 3161.787 kb on - strand, within MPMX26_03041 at 3161.854 kb on - strand, within MPMX26_03041 at 3161.948 kb on - strand, within MPMX26_03041 at 3161.951 kb on - strand, within MPMX26_03041 at 3161.951 kb on - strand, within MPMX26_03041 at 3161.951 kb on - strand, within MPMX26_03041 at 3162.123 kb on - strand at 3162.176 kb on - strand, within MPMX26_03042 at 3162.244 kb on + strand, within MPMX26_03042 at 3162.341 kb on + strand, within MPMX26_03042 at 3162.384 kb on + strand, within MPMX26_03042 at 3162.392 kb on + strand, within MPMX26_03042 at 3162.394 kb on + strand, within MPMX26_03042 at 3162.394 kb on + strand, within MPMX26_03042 at 3162.396 kb on + strand, within MPMX26_03042 at 3162.406 kb on + strand, within MPMX26_03042 at 3162.413 kb on + strand, within MPMX26_03042 at 3162.498 kb on + strand, within MPMX26_03042 at 3162.583 kb on + strand, within MPMX26_03042 at 3162.608 kb on + strand, within MPMX26_03042 at 3162.616 kb on - strand, within MPMX26_03042 at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.721 kb on + strand at 3162.725 kb on + strand at 3162.725 kb on + strand at 3162.725 kb on + strand at 3162.725 kb on + strand at 3162.725 kb on + strand at 3162.943 kb on + strand at 3162.951 kb on - strand at 3162.978 kb on - strand, within MPMX26_03043 at 3162.985 kb on - strand, within MPMX26_03043 at 3162.985 kb on - strand, within MPMX26_03043 at 3162.985 kb on - strand, within MPMX26_03043 at 3162.985 kb on - strand, within MPMX26_03043 at 3163.006 kb on - strand, within MPMX26_03043 at 3163.006 kb on - strand, within MPMX26_03043 at 3163.006 kb on - strand, within MPMX26_03043 at 3163.006 kb on - strand, within MPMX26_03043
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 3,161,273 - -0.6 3,161,278 - +0.2 3,161,280 - -0.0 3,161,315 - -0.7 3,161,315 - -0.6 3,161,315 - +0.6 3,161,375 - +0.7 3,161,512 + MPMX26_03041 0.13 -0.7 3,161,525 - MPMX26_03041 0.15 -0.8 3,161,525 - MPMX26_03041 0.15 -0.5 3,161,525 - MPMX26_03041 0.15 -0.5 3,161,525 - MPMX26_03041 0.15 -0.5 3,161,534 - MPMX26_03041 0.17 -0.3 3,161,585 - MPMX26_03041 0.26 -0.2 3,161,585 - MPMX26_03041 0.26 +0.1 3,161,585 - MPMX26_03041 0.26 +0.1 3,161,685 - MPMX26_03041 0.43 -0.1 3,161,733 - MPMX26_03041 0.52 -0.3 3,161,735 + MPMX26_03041 0.52 -0.6 3,161,787 - MPMX26_03041 0.61 -0.4 3,161,854 - MPMX26_03041 0.73 -1.0 3,161,948 - MPMX26_03041 0.89 -0.4 3,161,951 - MPMX26_03041 0.90 +0.1 3,161,951 - MPMX26_03041 0.90 +1.0 3,161,951 - MPMX26_03041 0.90 +0.8 3,162,123 - -0.8 3,162,176 - MPMX26_03042 0.10 +0.3 3,162,244 + MPMX26_03042 0.20 -1.6 3,162,341 + MPMX26_03042 0.35 +2.5 3,162,384 + MPMX26_03042 0.41 +0.0 3,162,392 + MPMX26_03042 0.43 -0.5 3,162,394 + MPMX26_03042 0.43 -0.1 3,162,394 + MPMX26_03042 0.43 -0.1 3,162,396 + MPMX26_03042 0.43 -0.3 3,162,406 + MPMX26_03042 0.45 -0.4 3,162,413 + MPMX26_03042 0.46 +1.5 3,162,498 + MPMX26_03042 0.59 -1.1 3,162,583 + MPMX26_03042 0.71 +2.1 3,162,608 + MPMX26_03042 0.75 +1.3 3,162,616 - MPMX26_03042 0.76 -0.1 3,162,720 + -1.7 3,162,720 + +1.0 3,162,720 + +0.4 3,162,720 + +0.4 3,162,720 + +0.4 3,162,720 + -0.5 3,162,720 + +2.1 3,162,720 + -0.4 3,162,720 + -1.4 3,162,720 + -0.3 3,162,720 + +0.5 3,162,720 + +2.0 3,162,720 + -0.6 3,162,720 + -1.0 3,162,720 + -1.2 3,162,721 + -0.2 3,162,725 + -1.0 3,162,725 + -0.3 3,162,725 + +1.6 3,162,725 + +0.5 3,162,725 + -0.3 3,162,943 + +0.2 3,162,951 - +0.5 3,162,978 - MPMX26_03043 0.12 -0.2 3,162,985 - MPMX26_03043 0.13 +0.6 3,162,985 - MPMX26_03043 0.13 -0.2 3,162,985 - MPMX26_03043 0.13 +0.9 3,162,985 - MPMX26_03043 0.13 +0.5 3,163,006 - MPMX26_03043 0.15 +0.5 3,163,006 - MPMX26_03043 0.15 +0.9 3,163,006 - MPMX26_03043 0.15 +0.9 3,163,006 - MPMX26_03043 0.15 -1.5
Or see this region's nucleotide sequence