Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03041

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03040 and MPMX26_03041 are separated by 439 nucleotidesMPMX26_03041 and MPMX26_03042 are separated by 99 nucleotidesMPMX26_03042 and MPMX26_03043 are separated by 75 nucleotides MPMX26_03040: MPMX26_03040 - 16S ribosomal RNA, at 3,159,467 to 3,160,999 _03040 MPMX26_03041: MPMX26_03041 - Peptidyl-prolyl cis-trans isomerase A, at 3,161,439 to 3,162,008 _03041 MPMX26_03042: MPMX26_03042 - hypothetical protein, at 3,162,108 to 3,162,773 _03042 MPMX26_03043: MPMX26_03043 - Carboxylesterase NlhH, at 3,162,849 to 3,163,919 _03043 Position (kb) 3161 3162 3163Strain fitness (log2 ratio) -1 0 1 2at 3161.273 kb on - strandat 3161.278 kb on - strandat 3161.280 kb on - strandat 3161.315 kb on - strandat 3161.315 kb on - strandat 3161.315 kb on - strandat 3161.375 kb on - strandat 3161.512 kb on + strand, within MPMX26_03041at 3161.525 kb on - strand, within MPMX26_03041at 3161.525 kb on - strand, within MPMX26_03041at 3161.525 kb on - strand, within MPMX26_03041at 3161.525 kb on - strand, within MPMX26_03041at 3161.534 kb on - strand, within MPMX26_03041at 3161.585 kb on - strand, within MPMX26_03041at 3161.585 kb on - strand, within MPMX26_03041at 3161.585 kb on - strand, within MPMX26_03041at 3161.685 kb on - strand, within MPMX26_03041at 3161.733 kb on - strand, within MPMX26_03041at 3161.735 kb on + strand, within MPMX26_03041at 3161.787 kb on - strand, within MPMX26_03041at 3161.854 kb on - strand, within MPMX26_03041at 3161.948 kb on - strand, within MPMX26_03041at 3161.951 kb on - strand, within MPMX26_03041at 3161.951 kb on - strand, within MPMX26_03041at 3161.951 kb on - strand, within MPMX26_03041at 3162.123 kb on - strandat 3162.176 kb on - strand, within MPMX26_03042at 3162.244 kb on + strand, within MPMX26_03042at 3162.341 kb on + strand, within MPMX26_03042at 3162.384 kb on + strand, within MPMX26_03042at 3162.392 kb on + strand, within MPMX26_03042at 3162.394 kb on + strand, within MPMX26_03042at 3162.394 kb on + strand, within MPMX26_03042at 3162.396 kb on + strand, within MPMX26_03042at 3162.406 kb on + strand, within MPMX26_03042at 3162.413 kb on + strand, within MPMX26_03042at 3162.498 kb on + strand, within MPMX26_03042at 3162.583 kb on + strand, within MPMX26_03042at 3162.608 kb on + strand, within MPMX26_03042at 3162.616 kb on - strand, within MPMX26_03042at 3162.720 kb on + strandat 3162.720 kb on + strandat 3162.720 kb on + strandat 3162.720 kb on + strandat 3162.720 kb on + strandat 3162.720 kb on + strandat 3162.720 kb on + strandat 3162.720 kb on + strandat 3162.720 kb on + strandat 3162.720 kb on + strandat 3162.720 kb on + strandat 3162.720 kb on + strandat 3162.720 kb on + strandat 3162.720 kb on + strandat 3162.720 kb on + strandat 3162.721 kb on + strandat 3162.725 kb on + strandat 3162.725 kb on + strandat 3162.725 kb on + strandat 3162.725 kb on + strandat 3162.725 kb on + strandat 3162.943 kb on + strandat 3162.951 kb on - strandat 3162.978 kb on - strand, within MPMX26_03043at 3162.985 kb on - strand, within MPMX26_03043at 3162.985 kb on - strand, within MPMX26_03043at 3162.985 kb on - strand, within MPMX26_03043at 3162.985 kb on - strand, within MPMX26_03043at 3163.006 kb on - strand, within MPMX26_03043at 3163.006 kb on - strand, within MPMX26_03043at 3163.006 kb on - strand, within MPMX26_03043at 3163.006 kb on - strand, within MPMX26_03043

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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3,161,273 - -0.6
3,161,278 - +0.2
3,161,280 - -0.0
3,161,315 - -0.7
3,161,315 - -0.6
3,161,315 - +0.6
3,161,375 - +0.7
3,161,512 + MPMX26_03041 0.13 -0.7
3,161,525 - MPMX26_03041 0.15 -0.8
3,161,525 - MPMX26_03041 0.15 -0.5
3,161,525 - MPMX26_03041 0.15 -0.5
3,161,525 - MPMX26_03041 0.15 -0.5
3,161,534 - MPMX26_03041 0.17 -0.3
3,161,585 - MPMX26_03041 0.26 -0.2
3,161,585 - MPMX26_03041 0.26 +0.1
3,161,585 - MPMX26_03041 0.26 +0.1
3,161,685 - MPMX26_03041 0.43 -0.1
3,161,733 - MPMX26_03041 0.52 -0.3
3,161,735 + MPMX26_03041 0.52 -0.6
3,161,787 - MPMX26_03041 0.61 -0.4
3,161,854 - MPMX26_03041 0.73 -1.0
3,161,948 - MPMX26_03041 0.89 -0.4
3,161,951 - MPMX26_03041 0.90 +0.1
3,161,951 - MPMX26_03041 0.90 +1.0
3,161,951 - MPMX26_03041 0.90 +0.8
3,162,123 - -0.8
3,162,176 - MPMX26_03042 0.10 +0.3
3,162,244 + MPMX26_03042 0.20 -1.6
3,162,341 + MPMX26_03042 0.35 +2.5
3,162,384 + MPMX26_03042 0.41 +0.0
3,162,392 + MPMX26_03042 0.43 -0.5
3,162,394 + MPMX26_03042 0.43 -0.1
3,162,394 + MPMX26_03042 0.43 -0.1
3,162,396 + MPMX26_03042 0.43 -0.3
3,162,406 + MPMX26_03042 0.45 -0.4
3,162,413 + MPMX26_03042 0.46 +1.5
3,162,498 + MPMX26_03042 0.59 -1.1
3,162,583 + MPMX26_03042 0.71 +2.1
3,162,608 + MPMX26_03042 0.75 +1.3
3,162,616 - MPMX26_03042 0.76 -0.1
3,162,720 + -1.7
3,162,720 + +1.0
3,162,720 + +0.4
3,162,720 + +0.4
3,162,720 + +0.4
3,162,720 + -0.5
3,162,720 + +2.1
3,162,720 + -0.4
3,162,720 + -1.4
3,162,720 + -0.3
3,162,720 + +0.5
3,162,720 + +2.0
3,162,720 + -0.6
3,162,720 + -1.0
3,162,720 + -1.2
3,162,721 + -0.2
3,162,725 + -1.0
3,162,725 + -0.3
3,162,725 + +1.6
3,162,725 + +0.5
3,162,725 + -0.3
3,162,943 + +0.2
3,162,951 - +0.5
3,162,978 - MPMX26_03043 0.12 -0.2
3,162,985 - MPMX26_03043 0.13 +0.6
3,162,985 - MPMX26_03043 0.13 -0.2
3,162,985 - MPMX26_03043 0.13 +0.9
3,162,985 - MPMX26_03043 0.13 +0.5
3,163,006 - MPMX26_03043 0.15 +0.5
3,163,006 - MPMX26_03043 0.15 +0.9
3,163,006 - MPMX26_03043 0.15 +0.9
3,163,006 - MPMX26_03043 0.15 -1.5

Or see this region's nucleotide sequence