Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02966

Experiment: no stress control

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02964 and MPMX26_02965 are separated by 200 nucleotidesMPMX26_02965 and MPMX26_02966 are separated by 51 nucleotidesMPMX26_02966 and MPMX26_02967 are separated by 152 nucleotidesMPMX26_02967 and MPMX26_02968 are separated by 412 nucleotides MPMX26_02964: MPMX26_02964 - Catalase, at 3,079,805 to 3,081,325 _02964 MPMX26_02965: MPMX26_02965 - D-aminoacyl-tRNA deacylase, at 3,081,526 to 3,081,966 _02965 MPMX26_02966: MPMX26_02966 - hypothetical protein, at 3,082,018 to 3,082,497 _02966 MPMX26_02967: MPMX26_02967 - hypothetical protein, at 3,082,650 to 3,082,985 _02967 MPMX26_02968: MPMX26_02968 - Phosphoserine phosphatase, at 3,083,398 to 3,084,618 _02968 Position (kb) 3082 3083Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 3081.041 kb on - strand, within MPMX26_02964at 3081.097 kb on + strand, within MPMX26_02964at 3081.097 kb on + strand, within MPMX26_02964at 3081.097 kb on + strand, within MPMX26_02964at 3081.105 kb on - strand, within MPMX26_02964at 3081.107 kb on - strand, within MPMX26_02964at 3081.107 kb on - strand, within MPMX26_02964at 3081.175 kb on - strandat 3081.205 kb on - strandat 3081.238 kb on - strandat 3081.291 kb on - strandat 3081.291 kb on - strandat 3081.293 kb on - strandat 3081.293 kb on - strandat 3081.293 kb on - strandat 3081.305 kb on - strandat 3081.323 kb on - strandat 3081.367 kb on - strandat 3081.497 kb on + strandat 3081.535 kb on + strandat 3081.535 kb on + strandat 3081.543 kb on + strandat 3081.631 kb on + strand, within MPMX26_02965at 3081.642 kb on + strand, within MPMX26_02965at 3081.642 kb on + strand, within MPMX26_02965at 3081.642 kb on + strand, within MPMX26_02965at 3081.650 kb on - strand, within MPMX26_02965at 3081.650 kb on - strand, within MPMX26_02965at 3081.702 kb on + strand, within MPMX26_02965at 3081.729 kb on + strand, within MPMX26_02965at 3081.729 kb on + strand, within MPMX26_02965at 3081.772 kb on + strand, within MPMX26_02965at 3081.801 kb on + strand, within MPMX26_02965at 3081.801 kb on + strand, within MPMX26_02965at 3081.867 kb on + strand, within MPMX26_02965at 3081.873 kb on + strand, within MPMX26_02965at 3081.873 kb on + strand, within MPMX26_02965at 3081.873 kb on + strand, within MPMX26_02965at 3081.916 kb on + strand, within MPMX26_02965at 3081.944 kb on + strandat 3082.013 kb on - strandat 3082.094 kb on - strand, within MPMX26_02966at 3082.109 kb on - strand, within MPMX26_02966at 3082.121 kb on - strand, within MPMX26_02966at 3082.121 kb on - strand, within MPMX26_02966at 3082.121 kb on - strand, within MPMX26_02966at 3082.121 kb on - strand, within MPMX26_02966at 3082.126 kb on - strand, within MPMX26_02966at 3082.126 kb on - strand, within MPMX26_02966at 3082.140 kb on - strand, within MPMX26_02966at 3082.178 kb on - strand, within MPMX26_02966at 3082.185 kb on - strand, within MPMX26_02966at 3082.199 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.216 kb on - strand, within MPMX26_02966at 3082.217 kb on - strand, within MPMX26_02966at 3082.218 kb on - strand, within MPMX26_02966at 3082.285 kb on - strand, within MPMX26_02966at 3082.285 kb on - strand, within MPMX26_02966at 3082.318 kb on + strand, within MPMX26_02966at 3082.326 kb on - strand, within MPMX26_02966at 3082.326 kb on - strand, within MPMX26_02966at 3082.326 kb on - strand, within MPMX26_02966at 3082.326 kb on - strand, within MPMX26_02966at 3082.326 kb on - strand, within MPMX26_02966at 3082.326 kb on - strand, within MPMX26_02966at 3082.326 kb on - strand, within MPMX26_02966at 3082.326 kb on - strand, within MPMX26_02966at 3082.326 kb on - strand, within MPMX26_02966at 3082.326 kb on - strand, within MPMX26_02966at 3082.326 kb on - strand, within MPMX26_02966at 3082.326 kb on - strand, within MPMX26_02966at 3082.326 kb on - strand, within MPMX26_02966at 3082.326 kb on - strand, within MPMX26_02966at 3082.326 kb on - strand, within MPMX26_02966at 3082.326 kb on - strand, within MPMX26_02966at 3082.326 kb on - strand, within MPMX26_02966at 3082.326 kb on - strand, within MPMX26_02966at 3082.326 kb on - strand, within MPMX26_02966at 3082.331 kb on - strand, within MPMX26_02966at 3082.331 kb on - strand, within MPMX26_02966at 3082.331 kb on - strand, within MPMX26_02966at 3082.331 kb on - strand, within MPMX26_02966at 3082.336 kb on - strand, within MPMX26_02966at 3082.336 kb on - strand, within MPMX26_02966at 3082.353 kb on - strand, within MPMX26_02966at 3082.361 kb on - strand, within MPMX26_02966at 3082.382 kb on - strand, within MPMX26_02966at 3082.382 kb on - strand, within MPMX26_02966at 3082.382 kb on - strand, within MPMX26_02966at 3082.392 kb on - strand, within MPMX26_02966at 3082.392 kb on - strand, within MPMX26_02966at 3082.398 kb on - strand, within MPMX26_02966at 3082.418 kb on - strand, within MPMX26_02966at 3082.418 kb on - strand, within MPMX26_02966at 3082.418 kb on - strand, within MPMX26_02966at 3082.418 kb on - strand, within MPMX26_02966at 3082.419 kb on - strand, within MPMX26_02966at 3082.448 kb on - strand, within MPMX26_02966at 3082.448 kb on - strand, within MPMX26_02966at 3082.453 kb on - strandat 3082.453 kb on - strandat 3082.453 kb on - strandat 3082.453 kb on - strandat 3082.464 kb on - strandat 3082.464 kb on - strandat 3082.481 kb on - strandat 3082.626 kb on - strandat 3082.653 kb on - strandat 3082.655 kb on + strandat 3082.665 kb on - strandat 3082.675 kb on - strandat 3082.710 kb on - strand, within MPMX26_02967at 3082.712 kb on - strand, within MPMX26_02967at 3082.730 kb on - strand, within MPMX26_02967at 3082.747 kb on - strand, within MPMX26_02967at 3082.747 kb on - strand, within MPMX26_02967at 3082.763 kb on - strand, within MPMX26_02967at 3082.770 kb on - strand, within MPMX26_02967at 3082.779 kb on - strand, within MPMX26_02967at 3082.783 kb on - strand, within MPMX26_02967at 3082.785 kb on - strand, within MPMX26_02967at 3082.790 kb on - strand, within MPMX26_02967at 3082.826 kb on - strand, within MPMX26_02967at 3082.857 kb on - strand, within MPMX26_02967at 3082.859 kb on - strand, within MPMX26_02967at 3082.869 kb on - strand, within MPMX26_02967at 3082.869 kb on - strand, within MPMX26_02967at 3082.869 kb on - strand, within MPMX26_02967at 3082.871 kb on - strand, within MPMX26_02967at 3082.879 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.917 kb on - strand, within MPMX26_02967at 3083.018 kb on - strandat 3083.029 kb on - strandat 3083.030 kb on - strandat 3083.039 kb on - strandat 3083.089 kb on - strandat 3083.089 kb on - strandat 3083.201 kb on + strandat 3083.214 kb on - strandat 3083.216 kb on + strandat 3083.224 kb on - strandat 3083.230 kb on - strandat 3083.370 kb on - strandat 3083.370 kb on - strandat 3083.372 kb on - strandat 3083.393 kb on - strandat 3083.395 kb on - strandat 3083.405 kb on + strandat 3083.407 kb on + strandat 3083.415 kb on - strandat 3083.429 kb on - strandat 3083.445 kb on - strandat 3083.456 kb on - strandat 3083.457 kb on - strandat 3083.483 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
remove
3,081,041 - MPMX26_02964 0.81 +2.5
3,081,097 + MPMX26_02964 0.85 -0.8
3,081,097 + MPMX26_02964 0.85 -0.5
3,081,097 + MPMX26_02964 0.85 +0.2
3,081,105 - MPMX26_02964 0.85 -0.8
3,081,107 - MPMX26_02964 0.86 +0.5
3,081,107 - MPMX26_02964 0.86 +0.7
3,081,175 - -0.5
3,081,205 - +1.5
3,081,238 - -0.7
3,081,291 - +0.2
3,081,291 - +0.3
3,081,293 - -0.3
3,081,293 - -0.1
3,081,293 - +0.0
3,081,305 - +0.5
3,081,323 - -0.3
3,081,367 - +0.9
3,081,497 + +0.9
3,081,535 + +0.7
3,081,535 + -1.6
3,081,543 + -0.7
3,081,631 + MPMX26_02965 0.24 +0.1
3,081,642 + MPMX26_02965 0.26 -0.6
3,081,642 + MPMX26_02965 0.26 +1.8
3,081,642 + MPMX26_02965 0.26 +0.6
3,081,650 - MPMX26_02965 0.28 -0.5
3,081,650 - MPMX26_02965 0.28 +0.6
3,081,702 + MPMX26_02965 0.40 -0.1
3,081,729 + MPMX26_02965 0.46 -0.3
3,081,729 + MPMX26_02965 0.46 +1.6
3,081,772 + MPMX26_02965 0.56 +0.6
3,081,801 + MPMX26_02965 0.62 +0.1
3,081,801 + MPMX26_02965 0.62 +0.1
3,081,867 + MPMX26_02965 0.77 -1.1
3,081,873 + MPMX26_02965 0.79 -0.3
3,081,873 + MPMX26_02965 0.79 +0.5
3,081,873 + MPMX26_02965 0.79 -0.3
3,081,916 + MPMX26_02965 0.88 -0.1
3,081,944 + +0.9
3,082,013 - -0.2
3,082,094 - MPMX26_02966 0.16 -3.1
3,082,109 - MPMX26_02966 0.19 +1.8
3,082,121 - MPMX26_02966 0.21 -1.3
3,082,121 - MPMX26_02966 0.21 +0.4
3,082,121 - MPMX26_02966 0.21 -1.7
3,082,121 - MPMX26_02966 0.21 -2.2
3,082,126 - MPMX26_02966 0.23 -0.7
3,082,126 - MPMX26_02966 0.23 -1.5
3,082,140 - MPMX26_02966 0.25 -1.2
3,082,178 - MPMX26_02966 0.33 -0.8
3,082,185 - MPMX26_02966 0.35 -1.5
3,082,199 - MPMX26_02966 0.38 -1.6
3,082,204 - MPMX26_02966 0.39 -1.4
3,082,204 - MPMX26_02966 0.39 -1.3
3,082,204 - MPMX26_02966 0.39 -1.6
3,082,204 - MPMX26_02966 0.39 -0.7
3,082,204 - MPMX26_02966 0.39 -1.4
3,082,204 - MPMX26_02966 0.39 -1.5
3,082,204 - MPMX26_02966 0.39 -2.0
3,082,204 - MPMX26_02966 0.39 -1.1
3,082,204 - MPMX26_02966 0.39 -2.1
3,082,204 - MPMX26_02966 0.39 -1.0
3,082,204 - MPMX26_02966 0.39 -0.2
3,082,204 - MPMX26_02966 0.39 -1.7
3,082,204 - MPMX26_02966 0.39 -2.0
3,082,204 - MPMX26_02966 0.39 -0.3
3,082,204 - MPMX26_02966 0.39 -1.9
3,082,204 - MPMX26_02966 0.39 -1.2
3,082,204 - MPMX26_02966 0.39 +0.5
3,082,204 - MPMX26_02966 0.39 -1.4
3,082,204 - MPMX26_02966 0.39 -0.5
3,082,204 - MPMX26_02966 0.39 -0.9
3,082,204 - MPMX26_02966 0.39 -1.5
3,082,204 - MPMX26_02966 0.39 -1.4
3,082,204 - MPMX26_02966 0.39 +1.5
3,082,204 - MPMX26_02966 0.39 -0.7
3,082,204 - MPMX26_02966 0.39 -1.7
3,082,204 - MPMX26_02966 0.39 -0.3
3,082,204 - MPMX26_02966 0.39 -2.2
3,082,204 - MPMX26_02966 0.39 -0.8
3,082,204 - MPMX26_02966 0.39 -2.4
3,082,204 - MPMX26_02966 0.39 -0.8
3,082,204 - MPMX26_02966 0.39 -1.1
3,082,204 - MPMX26_02966 0.39 -0.1
3,082,204 - MPMX26_02966 0.39 -2.6
3,082,204 - MPMX26_02966 0.39 -0.3
3,082,204 - MPMX26_02966 0.39 -1.8
3,082,204 - MPMX26_02966 0.39 -0.9
3,082,204 - MPMX26_02966 0.39 -0.4
3,082,204 - MPMX26_02966 0.39 -3.3
3,082,204 - MPMX26_02966 0.39 -0.2
3,082,204 - MPMX26_02966 0.39 -0.5
3,082,204 - MPMX26_02966 0.39 -2.0
3,082,204 - MPMX26_02966 0.39 -0.6
3,082,204 - MPMX26_02966 0.39 -2.3
3,082,204 - MPMX26_02966 0.39 -0.6
3,082,204 - MPMX26_02966 0.39 -2.1
3,082,204 - MPMX26_02966 0.39 -1.5
3,082,204 - MPMX26_02966 0.39 -1.6
3,082,204 - MPMX26_02966 0.39 -1.0
3,082,204 - MPMX26_02966 0.39 -0.6
3,082,216 - MPMX26_02966 0.41 -1.2
3,082,217 - MPMX26_02966 0.41 +0.6
3,082,218 - MPMX26_02966 0.42 -0.5
3,082,285 - MPMX26_02966 0.56 -2.4
3,082,285 - MPMX26_02966 0.56 -0.7
3,082,318 + MPMX26_02966 0.62 -1.4
3,082,326 - MPMX26_02966 0.64 -1.8
3,082,326 - MPMX26_02966 0.64 -0.6
3,082,326 - MPMX26_02966 0.64 -0.7
3,082,326 - MPMX26_02966 0.64 -1.4
3,082,326 - MPMX26_02966 0.64 -2.0
3,082,326 - MPMX26_02966 0.64 -0.7
3,082,326 - MPMX26_02966 0.64 +0.2
3,082,326 - MPMX26_02966 0.64 +1.3
3,082,326 - MPMX26_02966 0.64 -1.4
3,082,326 - MPMX26_02966 0.64 -2.5
3,082,326 - MPMX26_02966 0.64 -1.1
3,082,326 - MPMX26_02966 0.64 -1.0
3,082,326 - MPMX26_02966 0.64 -2.2
3,082,326 - MPMX26_02966 0.64 +0.3
3,082,326 - MPMX26_02966 0.64 -0.8
3,082,326 - MPMX26_02966 0.64 -1.9
3,082,326 - MPMX26_02966 0.64 -0.6
3,082,326 - MPMX26_02966 0.64 +0.8
3,082,326 - MPMX26_02966 0.64 -2.0
3,082,331 - MPMX26_02966 0.65 -1.2
3,082,331 - MPMX26_02966 0.65 -0.8
3,082,331 - MPMX26_02966 0.65 -0.9
3,082,331 - MPMX26_02966 0.65 -0.6
3,082,336 - MPMX26_02966 0.66 -1.0
3,082,336 - MPMX26_02966 0.66 -0.7
3,082,353 - MPMX26_02966 0.70 -1.2
3,082,361 - MPMX26_02966 0.71 -0.3
3,082,382 - MPMX26_02966 0.76 -1.0
3,082,382 - MPMX26_02966 0.76 -2.4
3,082,382 - MPMX26_02966 0.76 +0.5
3,082,392 - MPMX26_02966 0.78 -2.3
3,082,392 - MPMX26_02966 0.78 -2.7
3,082,398 - MPMX26_02966 0.79 -1.6
3,082,418 - MPMX26_02966 0.83 -1.4
3,082,418 - MPMX26_02966 0.83 -0.5
3,082,418 - MPMX26_02966 0.83 -0.5
3,082,418 - MPMX26_02966 0.83 -2.0
3,082,419 - MPMX26_02966 0.84 -3.1
3,082,448 - MPMX26_02966 0.90 +1.6
3,082,448 - MPMX26_02966 0.90 -1.1
3,082,453 - -0.4
3,082,453 - -2.3
3,082,453 - -0.5
3,082,453 - -3.1
3,082,464 - -1.2
3,082,464 - -3.2
3,082,481 - +0.5
3,082,626 - -0.1
3,082,653 - -0.3
3,082,655 + +0.5
3,082,665 - +0.7
3,082,675 - -0.3
3,082,710 - MPMX26_02967 0.18 -0.3
3,082,712 - MPMX26_02967 0.18 +0.2
3,082,730 - MPMX26_02967 0.24 -0.5
3,082,747 - MPMX26_02967 0.29 +0.6
3,082,747 - MPMX26_02967 0.29 +0.3
3,082,763 - MPMX26_02967 0.34 +0.8
3,082,770 - MPMX26_02967 0.36 -0.4
3,082,779 - MPMX26_02967 0.38 -0.3
3,082,783 - MPMX26_02967 0.40 +0.0
3,082,785 - MPMX26_02967 0.40 -0.4
3,082,790 - MPMX26_02967 0.42 +0.0
3,082,826 - MPMX26_02967 0.52 +0.2
3,082,857 - MPMX26_02967 0.62 +0.4
3,082,859 - MPMX26_02967 0.62 -0.2
3,082,869 - MPMX26_02967 0.65 -0.0
3,082,869 - MPMX26_02967 0.65 -0.1
3,082,869 - MPMX26_02967 0.65 +0.4
3,082,871 - MPMX26_02967 0.66 -0.6
3,082,879 - MPMX26_02967 0.68 +0.1
3,082,891 - MPMX26_02967 0.72 +0.7
3,082,891 - MPMX26_02967 0.72 -0.5
3,082,891 - MPMX26_02967 0.72 +0.2
3,082,891 - MPMX26_02967 0.72 -0.1
3,082,891 - MPMX26_02967 0.72 +0.5
3,082,891 - MPMX26_02967 0.72 +0.2
3,082,891 - MPMX26_02967 0.72 +0.1
3,082,891 - MPMX26_02967 0.72 -0.0
3,082,891 - MPMX26_02967 0.72 +0.2
3,082,891 - MPMX26_02967 0.72 +0.5
3,082,891 - MPMX26_02967 0.72 -2.0
3,082,891 - MPMX26_02967 0.72 +0.8
3,082,891 - MPMX26_02967 0.72 +0.6
3,082,917 - MPMX26_02967 0.79 -0.4
3,083,018 - -0.5
3,083,029 - +0.2
3,083,030 - -0.7
3,083,039 - -0.7
3,083,089 - -0.6
3,083,089 - -2.8
3,083,201 + +0.0
3,083,214 - -2.5
3,083,216 + -0.5
3,083,224 - -1.2
3,083,230 - +0.0
3,083,370 - +0.5
3,083,370 - +0.6
3,083,372 - -0.2
3,083,393 - -0.2
3,083,395 - -0.2
3,083,405 + -4.1
3,083,407 + -0.9
3,083,415 - +0.1
3,083,429 - -0.5
3,083,445 - -0.8
3,083,456 - +0.6
3,083,457 - -0.5
3,083,483 - -0.2

Or see this region's nucleotide sequence