Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02822

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02821 and MPMX26_02822 are separated by 12 nucleotidesMPMX26_02822 and MPMX26_02823 are separated by 10 nucleotidesMPMX26_02823 and MPMX26_02824 are separated by 11 nucleotides MPMX26_02821: MPMX26_02821 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase, at 2,909,484 to 2,910,983 _02821 MPMX26_02822: MPMX26_02822 - Peptidoglycan D,D-transpeptidase FtsI, at 2,910,996 to 2,912,819 _02822 MPMX26_02823: MPMX26_02823 - Cell division protein FtsL, at 2,912,830 to 2,913,177 _02823 MPMX26_02824: MPMX26_02824 - Ribosomal RNA small subunit methyltransferase H, at 2,913,189 to 2,914,100 _02824 Position (kb) 2910 2911 2912 2913Strain fitness (log2 ratio) -3 -2 -1 0 1at 2911.029 kb on - strandat 2913.194 kb on - strandat 2913.194 kb on - strandat 2913.199 kb on - strandat 2913.216 kb on - strandat 2913.216 kb on - strandat 2913.217 kb on - strandat 2913.231 kb on - strandat 2913.305 kb on - strand, within MPMX26_02824at 2913.332 kb on - strand, within MPMX26_02824at 2913.386 kb on - strand, within MPMX26_02824at 2913.402 kb on - strand, within MPMX26_02824at 2913.419 kb on - strand, within MPMX26_02824at 2913.453 kb on - strand, within MPMX26_02824at 2913.453 kb on - strand, within MPMX26_02824at 2913.453 kb on - strand, within MPMX26_02824at 2913.453 kb on - strand, within MPMX26_02824at 2913.453 kb on - strand, within MPMX26_02824at 2913.453 kb on - strand, within MPMX26_02824at 2913.473 kb on - strand, within MPMX26_02824at 2913.752 kb on - strand, within MPMX26_02824

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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2,911,029 - -0.2
2,913,194 - -0.8
2,913,194 - -2.6
2,913,199 - -2.0
2,913,216 - -2.3
2,913,216 - -2.6
2,913,217 - -0.1
2,913,231 - -1.7
2,913,305 - MPMX26_02824 0.13 -1.8
2,913,332 - MPMX26_02824 0.16 -3.1
2,913,386 - MPMX26_02824 0.22 -1.4
2,913,402 - MPMX26_02824 0.23 -3.2
2,913,419 - MPMX26_02824 0.25 -2.2
2,913,453 - MPMX26_02824 0.29 -2.1
2,913,453 - MPMX26_02824 0.29 -1.5
2,913,453 - MPMX26_02824 0.29 -2.6
2,913,453 - MPMX26_02824 0.29 -2.1
2,913,453 - MPMX26_02824 0.29 -1.6
2,913,453 - MPMX26_02824 0.29 -2.1
2,913,473 - MPMX26_02824 0.31 -1.8
2,913,752 - MPMX26_02824 0.62 -2.3

Or see this region's nucleotide sequence