Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02357

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02356 and MPMX26_02357 are separated by 276 nucleotidesMPMX26_02357 and MPMX26_02358 are separated by 51 nucleotidesMPMX26_02358 and MPMX26_02359 are separated by 144 nucleotides MPMX26_02356: MPMX26_02356 - hypothetical protein, at 2,440,691 to 2,441,332 _02356 MPMX26_02357: MPMX26_02357 - Proline/betaine transporter, at 2,441,609 to 2,442,877 _02357 MPMX26_02358: MPMX26_02358 - hypothetical protein, at 2,442,929 to 2,443,426 _02358 MPMX26_02359: MPMX26_02359 - hypothetical protein, at 2,443,571 to 2,443,858 _02359 Position (kb) 2441 2442 2443Strain fitness (log2 ratio) -2 -1 0 1 2at 2440.748 kb on + strandat 2440.748 kb on + strandat 2440.784 kb on + strand, within MPMX26_02356at 2440.803 kb on + strand, within MPMX26_02356at 2440.815 kb on + strand, within MPMX26_02356at 2440.827 kb on + strand, within MPMX26_02356at 2440.943 kb on + strand, within MPMX26_02356at 2440.943 kb on + strand, within MPMX26_02356at 2440.972 kb on + strand, within MPMX26_02356at 2441.000 kb on + strand, within MPMX26_02356at 2441.000 kb on + strand, within MPMX26_02356at 2441.000 kb on + strand, within MPMX26_02356at 2441.000 kb on + strand, within MPMX26_02356at 2441.000 kb on + strand, within MPMX26_02356at 2441.010 kb on + strand, within MPMX26_02356at 2441.010 kb on + strand, within MPMX26_02356at 2441.010 kb on + strand, within MPMX26_02356at 2441.017 kb on + strand, within MPMX26_02356at 2441.017 kb on + strand, within MPMX26_02356at 2441.017 kb on + strand, within MPMX26_02356at 2441.152 kb on + strand, within MPMX26_02356at 2441.216 kb on + strand, within MPMX26_02356at 2441.221 kb on + strand, within MPMX26_02356at 2441.242 kb on + strand, within MPMX26_02356at 2441.821 kb on - strand, within MPMX26_02357at 2442.648 kb on - strand, within MPMX26_02357at 2442.782 kb on + strandat 2443.185 kb on - strand, within MPMX26_02358at 2443.234 kb on - strand, within MPMX26_02358at 2443.631 kb on - strand, within MPMX26_02359at 2443.695 kb on - strand, within MPMX26_02359at 2443.717 kb on - strand, within MPMX26_02359

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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2,440,748 + -0.4
2,440,748 + +0.3
2,440,784 + MPMX26_02356 0.14 -0.2
2,440,803 + MPMX26_02356 0.17 +2.0
2,440,815 + MPMX26_02356 0.19 -0.2
2,440,827 + MPMX26_02356 0.21 +0.3
2,440,943 + MPMX26_02356 0.39 -2.3
2,440,943 + MPMX26_02356 0.39 +0.1
2,440,972 + MPMX26_02356 0.44 -0.1
2,441,000 + MPMX26_02356 0.48 -0.2
2,441,000 + MPMX26_02356 0.48 -1.7
2,441,000 + MPMX26_02356 0.48 +0.4
2,441,000 + MPMX26_02356 0.48 -0.6
2,441,000 + MPMX26_02356 0.48 -0.5
2,441,010 + MPMX26_02356 0.50 -0.0
2,441,010 + MPMX26_02356 0.50 +1.6
2,441,010 + MPMX26_02356 0.50 +1.4
2,441,017 + MPMX26_02356 0.51 -0.6
2,441,017 + MPMX26_02356 0.51 +0.3
2,441,017 + MPMX26_02356 0.51 +0.5
2,441,152 + MPMX26_02356 0.72 -0.9
2,441,216 + MPMX26_02356 0.82 +0.6
2,441,221 + MPMX26_02356 0.83 -0.2
2,441,242 + MPMX26_02356 0.86 -0.3
2,441,821 - MPMX26_02357 0.17 +0.5
2,442,648 - MPMX26_02357 0.82 +0.3
2,442,782 + +1.4
2,443,185 - MPMX26_02358 0.51 -1.9
2,443,234 - MPMX26_02358 0.61 +0.6
2,443,631 - MPMX26_02359 0.21 -1.7
2,443,695 - MPMX26_02359 0.43 +0.8
2,443,717 - MPMX26_02359 0.51 +1.2

Or see this region's nucleotide sequence