Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02309

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02307 and MPMX26_02308 are separated by 91 nucleotidesMPMX26_02308 and MPMX26_02309 are separated by 106 nucleotidesMPMX26_02309 and MPMX26_02310 are separated by 60 nucleotidesMPMX26_02310 and MPMX26_02311 are separated by 238 nucleotides MPMX26_02307: MPMX26_02307 - hypothetical protein, at 2,378,483 to 2,378,668 _02307 MPMX26_02308: MPMX26_02308 - Adenylate kinase, at 2,378,760 to 2,379,419 _02308 MPMX26_02309: MPMX26_02309 - hypothetical protein, at 2,379,526 to 2,380,839 _02309 MPMX26_02310: MPMX26_02310 - hypothetical protein, at 2,380,900 to 2,381,412 _02310 MPMX26_02311: MPMX26_02311 - Peptidoglycan D,D-transpeptidase MrdA, at 2,381,651 to 2,383,663 _02311 Position (kb) 2379 2380 2381Strain fitness (log2 ratio) -2 -1 0 1 2at 2378.544 kb on - strand, within MPMX26_02307at 2378.544 kb on - strand, within MPMX26_02307at 2378.570 kb on - strand, within MPMX26_02307at 2378.615 kb on - strand, within MPMX26_02307at 2378.678 kb on - strandat 2378.678 kb on - strandat 2378.683 kb on - strandat 2378.683 kb on - strandat 2378.685 kb on - strandat 2378.685 kb on - strandat 2378.685 kb on - strandat 2378.685 kb on - strandat 2378.685 kb on - strandat 2378.685 kb on - strandat 2379.588 kb on - strandat 2379.630 kb on - strandat 2379.630 kb on - strandat 2379.765 kb on - strand, within MPMX26_02309at 2379.823 kb on - strand, within MPMX26_02309at 2380.033 kb on - strand, within MPMX26_02309at 2380.071 kb on - strand, within MPMX26_02309at 2380.071 kb on - strand, within MPMX26_02309at 2380.071 kb on - strand, within MPMX26_02309at 2380.149 kb on - strand, within MPMX26_02309at 2380.159 kb on - strand, within MPMX26_02309at 2380.167 kb on - strand, within MPMX26_02309at 2380.167 kb on - strand, within MPMX26_02309at 2380.318 kb on - strand, within MPMX26_02309at 2380.374 kb on - strand, within MPMX26_02309at 2380.470 kb on - strand, within MPMX26_02309at 2380.477 kb on - strand, within MPMX26_02309at 2380.878 kb on - strandat 2381.335 kb on - strand, within MPMX26_02310

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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2,378,544 - MPMX26_02307 0.33 -2.2
2,378,544 - MPMX26_02307 0.33 -0.8
2,378,570 - MPMX26_02307 0.47 +0.6
2,378,615 - MPMX26_02307 0.71 +0.1
2,378,678 - +0.6
2,378,678 - -1.6
2,378,683 - -0.3
2,378,683 - +0.4
2,378,685 - -0.0
2,378,685 - +0.3
2,378,685 - +0.1
2,378,685 - +0.3
2,378,685 - -0.1
2,378,685 - -0.4
2,379,588 - -0.9
2,379,630 - -0.6
2,379,630 - -1.0
2,379,765 - MPMX26_02309 0.18 -0.0
2,379,823 - MPMX26_02309 0.23 -1.4
2,380,033 - MPMX26_02309 0.39 +1.0
2,380,071 - MPMX26_02309 0.41 +1.6
2,380,071 - MPMX26_02309 0.41 -0.1
2,380,071 - MPMX26_02309 0.41 +0.3
2,380,149 - MPMX26_02309 0.47 -1.0
2,380,159 - MPMX26_02309 0.48 -1.3
2,380,167 - MPMX26_02309 0.49 -0.0
2,380,167 - MPMX26_02309 0.49 -1.8
2,380,318 - MPMX26_02309 0.60 -0.4
2,380,374 - MPMX26_02309 0.65 -0.5
2,380,470 - MPMX26_02309 0.72 -2.2
2,380,477 - MPMX26_02309 0.72 +2.6
2,380,878 - +0.9
2,381,335 - MPMX26_02310 0.85 -0.6

Or see this region's nucleotide sequence