Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02219 and MPMX26_02220 are separated by 446 nucleotides MPMX26_02220 and MPMX26_02221 are separated by 18 nucleotides
MPMX26_02219: MPMX26_02219 - Phosphoserine aminotransferase, at 2,275,109 to 2,276,188
_02219
MPMX26_02220: MPMX26_02220 - hypothetical protein, at 2,276,635 to 2,278,143
_02220
MPMX26_02221: MPMX26_02221 - Colistin resistance protein EmrA, at 2,278,162 to 2,279,292
_02221
Position (kb)
2276
2277
2278
2279 Strain fitness (log2 ratio)
-1
0
1
2 at 2276.102 kb on - strand at 2276.673 kb on + strand at 2276.776 kb on + strand at 2276.776 kb on + strand at 2276.821 kb on + strand, within MPMX26_02220 at 2276.863 kb on + strand, within MPMX26_02220 at 2276.863 kb on + strand, within MPMX26_02220 at 2276.863 kb on + strand, within MPMX26_02220 at 2276.863 kb on + strand, within MPMX26_02220 at 2276.863 kb on + strand, within MPMX26_02220 at 2276.863 kb on + strand, within MPMX26_02220 at 2276.863 kb on + strand, within MPMX26_02220 at 2276.863 kb on + strand, within MPMX26_02220 at 2276.863 kb on + strand, within MPMX26_02220 at 2276.863 kb on + strand, within MPMX26_02220 at 2276.898 kb on + strand, within MPMX26_02220 at 2276.898 kb on + strand, within MPMX26_02220 at 2276.973 kb on + strand, within MPMX26_02220 at 2276.977 kb on + strand, within MPMX26_02220 at 2277.013 kb on + strand, within MPMX26_02220 at 2277.042 kb on + strand, within MPMX26_02220 at 2277.115 kb on + strand, within MPMX26_02220 at 2277.167 kb on + strand, within MPMX26_02220 at 2277.388 kb on + strand, within MPMX26_02220 at 2277.502 kb on + strand, within MPMX26_02220 at 2277.502 kb on + strand, within MPMX26_02220 at 2277.595 kb on + strand, within MPMX26_02220 at 2277.616 kb on + strand, within MPMX26_02220 at 2277.646 kb on + strand, within MPMX26_02220 at 2277.685 kb on + strand, within MPMX26_02220 at 2277.685 kb on + strand, within MPMX26_02220 at 2277.795 kb on + strand, within MPMX26_02220 at 2277.852 kb on + strand, within MPMX26_02220 at 2277.994 kb on + strand at 2278.071 kb on + strand at 2278.071 kb on + strand at 2278.582 kb on + strand, within MPMX26_02221 at 2278.752 kb on + strand, within MPMX26_02221 at 2278.752 kb on + strand, within MPMX26_02221 at 2278.762 kb on + strand, within MPMX26_02221 at 2278.863 kb on + strand, within MPMX26_02221 at 2278.947 kb on + strand, within MPMX26_02221 at 2279.050 kb on + strand, within MPMX26_02221
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,276,102 - -1.0 2,276,673 + -0.7 2,276,776 + +0.4 2,276,776 + -0.5 2,276,821 + MPMX26_02220 0.12 +0.4 2,276,863 + MPMX26_02220 0.15 -0.1 2,276,863 + MPMX26_02220 0.15 +0.6 2,276,863 + MPMX26_02220 0.15 +0.8 2,276,863 + MPMX26_02220 0.15 +0.4 2,276,863 + MPMX26_02220 0.15 +0.1 2,276,863 + MPMX26_02220 0.15 -0.4 2,276,863 + MPMX26_02220 0.15 -0.2 2,276,863 + MPMX26_02220 0.15 -0.3 2,276,863 + MPMX26_02220 0.15 +2.2 2,276,863 + MPMX26_02220 0.15 -0.7 2,276,898 + MPMX26_02220 0.17 +0.6 2,276,898 + MPMX26_02220 0.17 +2.0 2,276,973 + MPMX26_02220 0.22 -0.7 2,276,977 + MPMX26_02220 0.23 +2.6 2,277,013 + MPMX26_02220 0.25 +0.7 2,277,042 + MPMX26_02220 0.27 +0.1 2,277,115 + MPMX26_02220 0.32 +0.3 2,277,167 + MPMX26_02220 0.35 +0.5 2,277,388 + MPMX26_02220 0.50 -0.2 2,277,502 + MPMX26_02220 0.57 +1.9 2,277,502 + MPMX26_02220 0.57 +0.8 2,277,595 + MPMX26_02220 0.64 +0.3 2,277,616 + MPMX26_02220 0.65 +1.7 2,277,646 + MPMX26_02220 0.67 -0.1 2,277,685 + MPMX26_02220 0.70 +0.6 2,277,685 + MPMX26_02220 0.70 +0.6 2,277,795 + MPMX26_02220 0.77 -0.2 2,277,852 + MPMX26_02220 0.81 -1.3 2,277,994 + +0.6 2,278,071 + +1.0 2,278,071 + +1.6 2,278,582 + MPMX26_02221 0.37 +0.6 2,278,752 + MPMX26_02221 0.52 +1.6 2,278,752 + MPMX26_02221 0.52 +2.6 2,278,762 + MPMX26_02221 0.53 +1.0 2,278,863 + MPMX26_02221 0.62 -0.1 2,278,947 + MPMX26_02221 0.69 +0.3 2,279,050 + MPMX26_02221 0.79 -0.0
Or see this region's nucleotide sequence