Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02171 and MPMX26_02172 are separated by 87 nucleotides MPMX26_02172 and MPMX26_02173 are separated by 292 nucleotides
MPMX26_02171: MPMX26_02171 - HTH-type transcriptional regulator SsuR, at 2,226,366 to 2,227,289
_02171
MPMX26_02172: MPMX26_02172 - hypothetical protein, at 2,227,377 to 2,228,105
_02172
MPMX26_02173: MPMX26_02173 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 2,228,398 to 2,229,219
_02173
Position (kb)
2227
2228
2229 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2226.443 kb on + strand at 2226.443 kb on + strand at 2226.443 kb on + strand at 2226.443 kb on + strand at 2226.443 kb on + strand at 2226.443 kb on + strand at 2226.459 kb on + strand, within MPMX26_02171 at 2226.521 kb on + strand, within MPMX26_02171 at 2226.522 kb on + strand, within MPMX26_02171 at 2226.561 kb on + strand, within MPMX26_02171 at 2226.633 kb on + strand, within MPMX26_02171 at 2226.663 kb on + strand, within MPMX26_02171 at 2226.684 kb on + strand, within MPMX26_02171 at 2226.846 kb on + strand, within MPMX26_02171 at 2226.851 kb on + strand, within MPMX26_02171 at 2226.887 kb on + strand, within MPMX26_02171 at 2226.887 kb on + strand, within MPMX26_02171 at 2226.894 kb on + strand, within MPMX26_02171 at 2227.068 kb on + strand, within MPMX26_02171 at 2227.080 kb on + strand, within MPMX26_02171 at 2227.119 kb on + strand, within MPMX26_02171 at 2227.139 kb on + strand, within MPMX26_02171 at 2227.206 kb on + strand at 2227.483 kb on - strand, within MPMX26_02172 at 2227.484 kb on - strand, within MPMX26_02172 at 2227.488 kb on - strand, within MPMX26_02172 at 2227.488 kb on - strand, within MPMX26_02172 at 2227.488 kb on - strand, within MPMX26_02172 at 2227.488 kb on - strand, within MPMX26_02172 at 2227.495 kb on - strand, within MPMX26_02172 at 2227.495 kb on - strand, within MPMX26_02172 at 2227.495 kb on - strand, within MPMX26_02172 at 2227.495 kb on - strand, within MPMX26_02172 at 2227.495 kb on - strand, within MPMX26_02172 at 2227.495 kb on - strand, within MPMX26_02172 at 2227.498 kb on - strand, within MPMX26_02172 at 2227.498 kb on - strand, within MPMX26_02172 at 2227.534 kb on - strand, within MPMX26_02172 at 2227.578 kb on - strand, within MPMX26_02172 at 2227.596 kb on - strand, within MPMX26_02172 at 2227.596 kb on - strand, within MPMX26_02172 at 2227.614 kb on - strand, within MPMX26_02172 at 2227.653 kb on - strand, within MPMX26_02172 at 2227.653 kb on - strand, within MPMX26_02172 at 2227.668 kb on - strand, within MPMX26_02172 at 2227.709 kb on - strand, within MPMX26_02172 at 2227.709 kb on - strand, within MPMX26_02172 at 2227.722 kb on - strand, within MPMX26_02172 at 2227.760 kb on - strand, within MPMX26_02172 at 2227.760 kb on - strand, within MPMX26_02172 at 2227.773 kb on - strand, within MPMX26_02172 at 2227.776 kb on - strand, within MPMX26_02172 at 2227.809 kb on - strand, within MPMX26_02172 at 2227.844 kb on - strand, within MPMX26_02172 at 2227.844 kb on - strand, within MPMX26_02172 at 2227.868 kb on - strand, within MPMX26_02172 at 2227.878 kb on - strand, within MPMX26_02172 at 2227.952 kb on - strand, within MPMX26_02172 at 2227.952 kb on - strand, within MPMX26_02172 at 2227.952 kb on - strand, within MPMX26_02172 at 2227.972 kb on - strand, within MPMX26_02172 at 2227.982 kb on - strand, within MPMX26_02172 at 2227.984 kb on - strand, within MPMX26_02172 at 2228.018 kb on - strand, within MPMX26_02172 at 2228.065 kb on - strand at 2228.073 kb on - strand at 2228.115 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,226,443 + +0.8 2,226,443 + -0.0 2,226,443 + -0.2 2,226,443 + +1.0 2,226,443 + +0.3 2,226,443 + +1.8 2,226,459 + MPMX26_02171 0.10 +1.4 2,226,521 + MPMX26_02171 0.17 -2.0 2,226,522 + MPMX26_02171 0.17 -0.2 2,226,561 + MPMX26_02171 0.21 -0.8 2,226,633 + MPMX26_02171 0.29 +0.2 2,226,663 + MPMX26_02171 0.32 +0.1 2,226,684 + MPMX26_02171 0.34 -0.0 2,226,846 + MPMX26_02171 0.52 -0.1 2,226,851 + MPMX26_02171 0.52 -0.6 2,226,887 + MPMX26_02171 0.56 +0.1 2,226,887 + MPMX26_02171 0.56 -0.9 2,226,894 + MPMX26_02171 0.57 -0.9 2,227,068 + MPMX26_02171 0.76 +0.1 2,227,080 + MPMX26_02171 0.77 +1.6 2,227,119 + MPMX26_02171 0.81 +0.5 2,227,139 + MPMX26_02171 0.84 +2.0 2,227,206 + +0.4 2,227,483 - MPMX26_02172 0.15 -1.6 2,227,484 - MPMX26_02172 0.15 -2.5 2,227,488 - MPMX26_02172 0.15 -3.4 2,227,488 - MPMX26_02172 0.15 -1.9 2,227,488 - MPMX26_02172 0.15 -0.3 2,227,488 - MPMX26_02172 0.15 -2.5 2,227,495 - MPMX26_02172 0.16 +0.1 2,227,495 - MPMX26_02172 0.16 -0.4 2,227,495 - MPMX26_02172 0.16 -0.4 2,227,495 - MPMX26_02172 0.16 -0.3 2,227,495 - MPMX26_02172 0.16 -1.5 2,227,495 - MPMX26_02172 0.16 -1.0 2,227,498 - MPMX26_02172 0.17 -1.0 2,227,498 - MPMX26_02172 0.17 -2.7 2,227,534 - MPMX26_02172 0.22 -1.4 2,227,578 - MPMX26_02172 0.28 +0.6 2,227,596 - MPMX26_02172 0.30 -2.4 2,227,596 - MPMX26_02172 0.30 -2.0 2,227,614 - MPMX26_02172 0.33 -1.2 2,227,653 - MPMX26_02172 0.38 -0.7 2,227,653 - MPMX26_02172 0.38 -1.5 2,227,668 - MPMX26_02172 0.40 -1.5 2,227,709 - MPMX26_02172 0.46 -1.3 2,227,709 - MPMX26_02172 0.46 -1.7 2,227,722 - MPMX26_02172 0.47 -1.1 2,227,760 - MPMX26_02172 0.53 -2.0 2,227,760 - MPMX26_02172 0.53 -2.7 2,227,773 - MPMX26_02172 0.54 -3.2 2,227,776 - MPMX26_02172 0.55 -3.3 2,227,809 - MPMX26_02172 0.59 -0.6 2,227,844 - MPMX26_02172 0.64 -2.0 2,227,844 - MPMX26_02172 0.64 -3.0 2,227,868 - MPMX26_02172 0.67 -2.9 2,227,878 - MPMX26_02172 0.69 -1.8 2,227,952 - MPMX26_02172 0.79 -1.3 2,227,952 - MPMX26_02172 0.79 -0.6 2,227,952 - MPMX26_02172 0.79 -1.5 2,227,972 - MPMX26_02172 0.82 -0.4 2,227,982 - MPMX26_02172 0.83 -0.4 2,227,984 - MPMX26_02172 0.83 -0.7 2,228,018 - MPMX26_02172 0.88 -1.3 2,228,065 - -0.5 2,228,073 - -0.5 2,228,115 + +0.6
Or see this region's nucleotide sequence