Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01776 and MPMX26_01777 are separated by 147 nucleotides MPMX26_01777 and MPMX26_01778 are separated by 266 nucleotides MPMX26_01778 and MPMX26_01779 are separated by 56 nucleotides MPMX26_01779 and MPMX26_01780 are separated by 120 nucleotides
MPMX26_01776: MPMX26_01776 - S-adenosylmethionine synthase, at 1,838,171 to 1,839,337
_01776
MPMX26_01777: MPMX26_01777 - hypothetical protein, at 1,839,485 to 1,839,748
_01777
MPMX26_01778: MPMX26_01778 - hypothetical protein, at 1,840,015 to 1,840,212
_01778
MPMX26_01779: MPMX26_01779 - hypothetical protein, at 1,840,269 to 1,840,850
_01779
MPMX26_01780: MPMX26_01780 - Crossover junction endodeoxyribonuclease RuvC, at 1,840,971 to 1,841,516
_01780
Position (kb)
1840
1841 Strain fitness (log2 ratio)
-1
0
1 at 1839.324 kb on + strand at 1839.346 kb on + strand at 1839.397 kb on + strand at 1840.026 kb on + strand at 1840.029 kb on + strand at 1840.114 kb on + strand, within MPMX26_01778 at 1840.362 kb on - strand, within MPMX26_01779 at 1840.380 kb on - strand, within MPMX26_01779 at 1840.443 kb on - strand, within MPMX26_01779 at 1840.448 kb on - strand, within MPMX26_01779 at 1840.496 kb on - strand, within MPMX26_01779 at 1840.518 kb on - strand, within MPMX26_01779 at 1840.659 kb on - strand, within MPMX26_01779 at 1840.664 kb on - strand, within MPMX26_01779 at 1840.664 kb on - strand, within MPMX26_01779 at 1840.683 kb on - strand, within MPMX26_01779 at 1840.823 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,839,324 + +0.9 1,839,346 + -0.1 1,839,397 + +0.5 1,840,026 + -0.1 1,840,029 + -0.0 1,840,114 + MPMX26_01778 0.50 -1.1 1,840,362 - MPMX26_01779 0.16 -1.1 1,840,380 - MPMX26_01779 0.19 -0.8 1,840,443 - MPMX26_01779 0.30 -0.8 1,840,448 - MPMX26_01779 0.31 -0.1 1,840,496 - MPMX26_01779 0.39 -0.9 1,840,518 - MPMX26_01779 0.43 +1.1 1,840,659 - MPMX26_01779 0.67 -1.3 1,840,664 - MPMX26_01779 0.68 -0.2 1,840,664 - MPMX26_01779 0.68 -1.0 1,840,683 - MPMX26_01779 0.71 -0.5 1,840,823 - -0.2
Or see this region's nucleotide sequence