Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01778

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01776 and MPMX26_01777 are separated by 147 nucleotidesMPMX26_01777 and MPMX26_01778 are separated by 266 nucleotidesMPMX26_01778 and MPMX26_01779 are separated by 56 nucleotidesMPMX26_01779 and MPMX26_01780 are separated by 120 nucleotides MPMX26_01776: MPMX26_01776 - S-adenosylmethionine synthase, at 1,838,171 to 1,839,337 _01776 MPMX26_01777: MPMX26_01777 - hypothetical protein, at 1,839,485 to 1,839,748 _01777 MPMX26_01778: MPMX26_01778 - hypothetical protein, at 1,840,015 to 1,840,212 _01778 MPMX26_01779: MPMX26_01779 - hypothetical protein, at 1,840,269 to 1,840,850 _01779 MPMX26_01780: MPMX26_01780 - Crossover junction endodeoxyribonuclease RuvC, at 1,840,971 to 1,841,516 _01780 Position (kb) 1840 1841Strain fitness (log2 ratio) -1 0 1at 1839.324 kb on + strandat 1839.346 kb on + strandat 1839.397 kb on + strandat 1840.026 kb on + strandat 1840.029 kb on + strandat 1840.114 kb on + strand, within MPMX26_01778at 1840.362 kb on - strand, within MPMX26_01779at 1840.380 kb on - strand, within MPMX26_01779at 1840.443 kb on - strand, within MPMX26_01779at 1840.448 kb on - strand, within MPMX26_01779at 1840.496 kb on - strand, within MPMX26_01779at 1840.518 kb on - strand, within MPMX26_01779at 1840.659 kb on - strand, within MPMX26_01779at 1840.664 kb on - strand, within MPMX26_01779at 1840.664 kb on - strand, within MPMX26_01779at 1840.683 kb on - strand, within MPMX26_01779at 1840.823 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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1,839,324 + +0.9
1,839,346 + -0.1
1,839,397 + +0.5
1,840,026 + -0.1
1,840,029 + -0.0
1,840,114 + MPMX26_01778 0.50 -1.1
1,840,362 - MPMX26_01779 0.16 -1.1
1,840,380 - MPMX26_01779 0.19 -0.8
1,840,443 - MPMX26_01779 0.30 -0.8
1,840,448 - MPMX26_01779 0.31 -0.1
1,840,496 - MPMX26_01779 0.39 -0.9
1,840,518 - MPMX26_01779 0.43 +1.1
1,840,659 - MPMX26_01779 0.67 -1.3
1,840,664 - MPMX26_01779 0.68 -0.2
1,840,664 - MPMX26_01779 0.68 -1.0
1,840,683 - MPMX26_01779 0.71 -0.5
1,840,823 - -0.2

Or see this region's nucleotide sequence