Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01721

Experiment: no stress control

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_01719 and MPMX26_01720 are separated by 34 nucleotidesMPMX26_01720 and MPMX26_01721 overlap by 4 nucleotidesMPMX26_01721 and MPMX26_01722 are separated by 785 nucleotides MPMX26_01719: MPMX26_01719 - Putative aminoacrylate peracid reductase RutC, at 1,775,525 to 1,775,908 _01719 MPMX26_01720: MPMX26_01720 - Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB, at 1,775,943 to 1,776,683 _01720 MPMX26_01721: MPMX26_01721 - Pyrimidine monooxygenase RutA, at 1,776,680 to 1,777,792 _01721 MPMX26_01722: MPMX26_01722 - putative malonic semialdehyde reductase RutE, at 1,778,578 to 1,779,177 _01722 Position (kb) 1776 1777 1778Strain fitness (log2 ratio) -1 0 1at 1776.212 kb on - strand, within MPMX26_01720

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
remove
1,776,212 - MPMX26_01720 0.36 +0.2

Or see this region's nucleotide sequence