Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01216 and MPMX26_01217 are separated by 44 nucleotides MPMX26_01217 and MPMX26_01218 are separated by 14 nucleotides MPMX26_01218 and MPMX26_01219 overlap by 1 nucleotides
MPMX26_01216: MPMX26_01216 - putative chromosome-partitioning protein ParB, at 1,291,614 to 1,292,501
_01216
MPMX26_01217: MPMX26_01217 - Biopolymer transport protein ExbB, at 1,292,546 to 1,293,178
_01217
MPMX26_01218: MPMX26_01218 - Tol-Pal system protein TolR, at 1,293,193 to 1,293,615
_01218
MPMX26_01219: MPMX26_01219 - Lipid A export ATP-binding/permease protein MsbA, at 1,293,615 to 1,295,342
_01219
Position (kb)
1293
1294 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1292.247 kb on + strand, within MPMX26_01216 at 1292.269 kb on + strand, within MPMX26_01216 at 1292.289 kb on + strand, within MPMX26_01216 at 1292.304 kb on + strand, within MPMX26_01216 at 1292.304 kb on + strand, within MPMX26_01216 at 1292.314 kb on + strand, within MPMX26_01216 at 1292.314 kb on + strand, within MPMX26_01216 at 1292.314 kb on + strand, within MPMX26_01216 at 1292.314 kb on + strand, within MPMX26_01216 at 1292.353 kb on + strand, within MPMX26_01216 at 1292.353 kb on + strand, within MPMX26_01216 at 1292.353 kb on + strand, within MPMX26_01216 at 1292.358 kb on + strand, within MPMX26_01216 at 1292.465 kb on + strand at 1292.465 kb on + strand at 1292.496 kb on + strand at 1292.496 kb on + strand at 1292.539 kb on + strand at 1292.542 kb on - strand at 1292.574 kb on + strand at 1292.574 kb on + strand at 1292.574 kb on + strand at 1292.574 kb on + strand at 1292.598 kb on + strand at 1292.603 kb on + strand at 1292.632 kb on + strand, within MPMX26_01217 at 1292.632 kb on + strand, within MPMX26_01217 at 1292.661 kb on + strand, within MPMX26_01217 at 1292.664 kb on + strand, within MPMX26_01217 at 1292.715 kb on + strand, within MPMX26_01217 at 1292.726 kb on + strand, within MPMX26_01217 at 1292.727 kb on + strand, within MPMX26_01217 at 1292.727 kb on + strand, within MPMX26_01217 at 1292.727 kb on + strand, within MPMX26_01217 at 1292.740 kb on + strand, within MPMX26_01217 at 1292.764 kb on + strand, within MPMX26_01217 at 1292.771 kb on + strand, within MPMX26_01217 at 1292.771 kb on + strand, within MPMX26_01217 at 1292.771 kb on + strand, within MPMX26_01217 at 1292.800 kb on + strand, within MPMX26_01217 at 1292.800 kb on + strand, within MPMX26_01217 at 1292.800 kb on + strand, within MPMX26_01217 at 1292.800 kb on + strand, within MPMX26_01217 at 1292.800 kb on + strand, within MPMX26_01217 at 1292.810 kb on + strand, within MPMX26_01217 at 1292.878 kb on + strand, within MPMX26_01217 at 1292.881 kb on + strand, within MPMX26_01217 at 1292.886 kb on + strand, within MPMX26_01217 at 1292.906 kb on + strand, within MPMX26_01217 at 1292.908 kb on + strand, within MPMX26_01217 at 1292.908 kb on + strand, within MPMX26_01217 at 1292.908 kb on + strand, within MPMX26_01217 at 1292.908 kb on + strand, within MPMX26_01217 at 1292.911 kb on + strand, within MPMX26_01217 at 1292.911 kb on + strand, within MPMX26_01217 at 1292.913 kb on + strand, within MPMX26_01217 at 1292.913 kb on + strand, within MPMX26_01217 at 1292.913 kb on + strand, within MPMX26_01217 at 1292.913 kb on + strand, within MPMX26_01217 at 1292.913 kb on + strand, within MPMX26_01217 at 1292.918 kb on + strand, within MPMX26_01217 at 1292.918 kb on + strand, within MPMX26_01217 at 1292.918 kb on + strand, within MPMX26_01217 at 1292.923 kb on + strand, within MPMX26_01217 at 1292.923 kb on + strand, within MPMX26_01217 at 1292.957 kb on + strand, within MPMX26_01217 at 1292.975 kb on + strand, within MPMX26_01217 at 1293.087 kb on + strand, within MPMX26_01217 at 1293.096 kb on + strand, within MPMX26_01217 at 1293.128 kb on + strand at 1293.133 kb on + strand at 1293.311 kb on + strand, within MPMX26_01218 at 1293.321 kb on + strand, within MPMX26_01218 at 1293.931 kb on - strand, within MPMX26_01219
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,292,247 + MPMX26_01216 0.71 -2.1 1,292,269 + MPMX26_01216 0.74 +1.6 1,292,289 + MPMX26_01216 0.76 -0.8 1,292,304 + MPMX26_01216 0.78 -0.4 1,292,304 + MPMX26_01216 0.78 -0.9 1,292,314 + MPMX26_01216 0.79 +0.3 1,292,314 + MPMX26_01216 0.79 -0.7 1,292,314 + MPMX26_01216 0.79 +0.4 1,292,314 + MPMX26_01216 0.79 -1.4 1,292,353 + MPMX26_01216 0.83 +0.5 1,292,353 + MPMX26_01216 0.83 -0.6 1,292,353 + MPMX26_01216 0.83 -0.9 1,292,358 + MPMX26_01216 0.84 +0.2 1,292,465 + -0.4 1,292,465 + -0.7 1,292,496 + -0.1 1,292,496 + -0.2 1,292,539 + -0.6 1,292,542 - -1.7 1,292,574 + +0.1 1,292,574 + -0.0 1,292,574 + -0.2 1,292,574 + +0.3 1,292,598 + +0.3 1,292,603 + -0.5 1,292,632 + MPMX26_01217 0.14 -0.1 1,292,632 + MPMX26_01217 0.14 -0.2 1,292,661 + MPMX26_01217 0.18 +0.5 1,292,664 + MPMX26_01217 0.19 +2.0 1,292,715 + MPMX26_01217 0.27 +0.1 1,292,726 + MPMX26_01217 0.28 +1.0 1,292,727 + MPMX26_01217 0.29 -0.2 1,292,727 + MPMX26_01217 0.29 +0.6 1,292,727 + MPMX26_01217 0.29 -1.0 1,292,740 + MPMX26_01217 0.31 +0.5 1,292,764 + MPMX26_01217 0.34 +0.4 1,292,771 + MPMX26_01217 0.36 +0.3 1,292,771 + MPMX26_01217 0.36 -0.6 1,292,771 + MPMX26_01217 0.36 +0.3 1,292,800 + MPMX26_01217 0.40 -0.1 1,292,800 + MPMX26_01217 0.40 +0.6 1,292,800 + MPMX26_01217 0.40 +0.0 1,292,800 + MPMX26_01217 0.40 +0.6 1,292,800 + MPMX26_01217 0.40 -0.5 1,292,810 + MPMX26_01217 0.42 +1.0 1,292,878 + MPMX26_01217 0.52 +0.0 1,292,881 + MPMX26_01217 0.53 +1.3 1,292,886 + MPMX26_01217 0.54 +0.4 1,292,906 + MPMX26_01217 0.57 -0.2 1,292,908 + MPMX26_01217 0.57 -0.4 1,292,908 + MPMX26_01217 0.57 +1.1 1,292,908 + MPMX26_01217 0.57 +0.1 1,292,908 + MPMX26_01217 0.57 +0.2 1,292,911 + MPMX26_01217 0.58 +0.4 1,292,911 + MPMX26_01217 0.58 +0.5 1,292,913 + MPMX26_01217 0.58 -1.0 1,292,913 + MPMX26_01217 0.58 +0.9 1,292,913 + MPMX26_01217 0.58 -0.4 1,292,913 + MPMX26_01217 0.58 +0.1 1,292,913 + MPMX26_01217 0.58 +0.3 1,292,918 + MPMX26_01217 0.59 -0.7 1,292,918 + MPMX26_01217 0.59 -1.0 1,292,918 + MPMX26_01217 0.59 +0.8 1,292,923 + MPMX26_01217 0.60 -0.1 1,292,923 + MPMX26_01217 0.60 -0.5 1,292,957 + MPMX26_01217 0.65 -0.1 1,292,975 + MPMX26_01217 0.68 -0.2 1,293,087 + MPMX26_01217 0.85 -0.4 1,293,096 + MPMX26_01217 0.87 -0.2 1,293,128 + +0.1 1,293,133 + -0.6 1,293,311 + MPMX26_01218 0.28 +2.1 1,293,321 + MPMX26_01218 0.30 +1.2 1,293,931 - MPMX26_01219 0.18 -1.6
Or see this region's nucleotide sequence