Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01005

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01004 and MPMX26_01005 are separated by 137 nucleotidesMPMX26_01005 and MPMX26_01006 are separated by 138 nucleotides MPMX26_01004: MPMX26_01004 - Deoxyribodipyrimidine photo-lyase, at 1,056,052 to 1,057,491 _01004 MPMX26_01005: MPMX26_01005 - FKBP-type peptidyl-prolyl cis-trans isomerase SlyD, at 1,057,629 to 1,058,111 _01005 MPMX26_01006: MPMX26_01006 - NADH dehydrogenase, at 1,058,250 to 1,059,521 _01006 Position (kb) 1057 1058 1059Strain fitness (log2 ratio) -3 -2 -1 0 1at 1057.283 kb on + strand, within MPMX26_01004at 1057.434 kb on - strandat 1057.638 kb on - strandat 1057.732 kb on - strand, within MPMX26_01005at 1057.733 kb on - strand, within MPMX26_01005at 1057.733 kb on - strand, within MPMX26_01005at 1057.733 kb on - strand, within MPMX26_01005at 1057.733 kb on - strand, within MPMX26_01005at 1057.746 kb on - strand, within MPMX26_01005at 1057.772 kb on - strand, within MPMX26_01005at 1057.797 kb on - strand, within MPMX26_01005at 1057.802 kb on - strand, within MPMX26_01005at 1057.802 kb on - strand, within MPMX26_01005at 1057.807 kb on - strand, within MPMX26_01005at 1057.827 kb on - strand, within MPMX26_01005at 1057.827 kb on - strand, within MPMX26_01005at 1057.835 kb on - strand, within MPMX26_01005at 1057.835 kb on - strand, within MPMX26_01005at 1057.835 kb on - strand, within MPMX26_01005at 1057.897 kb on - strand, within MPMX26_01005at 1057.898 kb on - strand, within MPMX26_01005at 1057.902 kb on - strand, within MPMX26_01005at 1057.902 kb on - strand, within MPMX26_01005at 1057.902 kb on - strand, within MPMX26_01005at 1057.912 kb on - strand, within MPMX26_01005at 1057.914 kb on - strand, within MPMX26_01005at 1058.016 kb on - strand, within MPMX26_01005at 1058.034 kb on - strand, within MPMX26_01005at 1058.052 kb on - strand, within MPMX26_01005at 1058.052 kb on - strand, within MPMX26_01005at 1058.052 kb on - strand, within MPMX26_01005at 1058.062 kb on - strand, within MPMX26_01005at 1058.062 kb on - strand, within MPMX26_01005at 1058.064 kb on - strandat 1058.064 kb on - strandat 1058.064 kb on - strandat 1058.064 kb on - strandat 1058.064 kb on - strandat 1058.069 kb on - strandat 1058.069 kb on - strandat 1058.069 kb on - strandat 1058.069 kb on - strandat 1058.069 kb on - strandat 1058.074 kb on - strandat 1058.074 kb on - strandat 1058.074 kb on - strandat 1058.074 kb on - strandat 1058.074 kb on - strandat 1058.074 kb on - strandat 1058.074 kb on - strandat 1058.074 kb on - strandat 1058.074 kb on - strandat 1058.074 kb on - strandat 1058.074 kb on - strandat 1058.074 kb on - strandat 1058.074 kb on - strandat 1058.074 kb on - strandat 1058.074 kb on - strandat 1058.074 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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1,057,283 + MPMX26_01004 0.85 -0.5
1,057,434 - +1.2
1,057,638 - -0.9
1,057,732 - MPMX26_01005 0.21 -1.4
1,057,733 - MPMX26_01005 0.22 -0.8
1,057,733 - MPMX26_01005 0.22 -0.5
1,057,733 - MPMX26_01005 0.22 -1.7
1,057,733 - MPMX26_01005 0.22 -0.9
1,057,746 - MPMX26_01005 0.24 -2.5
1,057,772 - MPMX26_01005 0.30 -1.7
1,057,797 - MPMX26_01005 0.35 -1.2
1,057,802 - MPMX26_01005 0.36 -1.1
1,057,802 - MPMX26_01005 0.36 -0.8
1,057,807 - MPMX26_01005 0.37 -0.8
1,057,827 - MPMX26_01005 0.41 -1.8
1,057,827 - MPMX26_01005 0.41 -1.2
1,057,835 - MPMX26_01005 0.43 -0.5
1,057,835 - MPMX26_01005 0.43 -1.3
1,057,835 - MPMX26_01005 0.43 -1.1
1,057,897 - MPMX26_01005 0.55 -0.8
1,057,898 - MPMX26_01005 0.56 -1.5
1,057,902 - MPMX26_01005 0.57 -0.8
1,057,902 - MPMX26_01005 0.57 -2.5
1,057,902 - MPMX26_01005 0.57 -1.9
1,057,912 - MPMX26_01005 0.59 -1.0
1,057,914 - MPMX26_01005 0.59 -1.3
1,058,016 - MPMX26_01005 0.80 -1.8
1,058,034 - MPMX26_01005 0.84 -2.8
1,058,052 - MPMX26_01005 0.88 -1.2
1,058,052 - MPMX26_01005 0.88 -0.9
1,058,052 - MPMX26_01005 0.88 -1.5
1,058,062 - MPMX26_01005 0.90 -1.0
1,058,062 - MPMX26_01005 0.90 -2.1
1,058,064 - -0.0
1,058,064 - +0.7
1,058,064 - -0.3
1,058,064 - -1.3
1,058,064 - +0.8
1,058,069 - -1.1
1,058,069 - -1.3
1,058,069 - -1.3
1,058,069 - -0.7
1,058,069 - -2.9
1,058,074 - -0.7
1,058,074 - -0.4
1,058,074 - -3.3
1,058,074 - -1.0
1,058,074 - -1.8
1,058,074 - -3.2
1,058,074 - -2.2
1,058,074 - -3.0
1,058,074 - -1.1
1,058,074 - -1.1
1,058,074 - -0.4
1,058,074 - -0.5
1,058,074 - -3.0
1,058,074 - -2.1
1,058,074 - -0.1
1,058,074 - -0.4

Or see this region's nucleotide sequence