Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00873

Experiment: no stress control

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_00872 and MPMX26_00873 are separated by 833 nucleotidesMPMX26_00873 and MPMX26_00874 are separated by 41 nucleotidesMPMX26_00874 and MPMX26_00875 are separated by 292 nucleotides MPMX26_00872: MPMX26_00872 - putative zinc-binding alcohol dehydrogenase, at 918,709 to 919,872 _00872 MPMX26_00873: MPMX26_00873 - hypothetical protein, at 920,706 to 920,894 _00873 MPMX26_00874: MPMX26_00874 - hypothetical protein, at 920,936 to 921,049 _00874 MPMX26_00875: MPMX26_00875 - hypothetical protein, at 921,342 to 921,803 _00875 Position (kb) 920 921Strain fitness (log2 ratio) -2 -1 0 1at 920.321 kb on - strandat 920.748 kb on - strand, within MPMX26_00873at 921.443 kb on + strand, within MPMX26_00875at 921.598 kb on + strand, within MPMX26_00875at 921.608 kb on + strand, within MPMX26_00875at 921.632 kb on + strand, within MPMX26_00875at 921.767 kb on + strandat 921.843 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
remove
920,321 - +0.4
920,748 - MPMX26_00873 0.22 -1.0
921,443 + MPMX26_00875 0.22 +0.1
921,598 + MPMX26_00875 0.55 -2.0
921,608 + MPMX26_00875 0.58 -1.0
921,632 + MPMX26_00875 0.63 +1.6
921,767 + -0.1
921,843 + -1.5

Or see this region's nucleotide sequence