Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00562

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00560 and MPMX26_00561 are separated by 11 nucleotidesMPMX26_00561 and MPMX26_00562 are separated by 383 nucleotidesMPMX26_00562 and MPMX26_00563 are separated by 156 nucleotides MPMX26_00560: MPMX26_00560 - 50S ribosomal protein L35, at 591,402 to 591,596 _00560 MPMX26_00561: MPMX26_00561 - 50S ribosomal protein L20, at 591,608 to 591,967 _00561 MPMX26_00562: MPMX26_00562 - hypothetical protein, at 592,351 to 593,388 _00562 MPMX26_00563: MPMX26_00563 - Phenylalanine--tRNA ligase alpha subunit, at 593,545 to 594,525 _00563 Position (kb) 592 593 594Strain fitness (log2 ratio) -1 0 1 2at 591.943 kb on + strandat 591.943 kb on + strandat 591.962 kb on + strandat 592.003 kb on + strandat 592.435 kb on - strandat 592.474 kb on - strand, within MPMX26_00562at 592.474 kb on - strand, within MPMX26_00562at 592.490 kb on - strand, within MPMX26_00562at 592.500 kb on - strand, within MPMX26_00562at 592.500 kb on - strand, within MPMX26_00562at 592.500 kb on - strand, within MPMX26_00562at 592.528 kb on - strand, within MPMX26_00562at 592.530 kb on - strand, within MPMX26_00562at 592.543 kb on - strand, within MPMX26_00562at 592.543 kb on - strand, within MPMX26_00562at 592.543 kb on - strand, within MPMX26_00562at 592.543 kb on - strand, within MPMX26_00562at 592.543 kb on - strand, within MPMX26_00562at 592.543 kb on - strand, within MPMX26_00562at 592.578 kb on - strand, within MPMX26_00562at 592.581 kb on - strand, within MPMX26_00562at 592.642 kb on - strand, within MPMX26_00562at 592.642 kb on - strand, within MPMX26_00562at 592.642 kb on - strand, within MPMX26_00562at 592.642 kb on - strand, within MPMX26_00562at 592.642 kb on - strand, within MPMX26_00562at 592.642 kb on - strand, within MPMX26_00562at 592.642 kb on - strand, within MPMX26_00562at 592.710 kb on - strand, within MPMX26_00562at 592.710 kb on - strand, within MPMX26_00562at 592.710 kb on - strand, within MPMX26_00562at 592.710 kb on - strand, within MPMX26_00562at 592.710 kb on - strand, within MPMX26_00562at 592.710 kb on - strand, within MPMX26_00562at 592.710 kb on - strand, within MPMX26_00562at 592.710 kb on - strand, within MPMX26_00562at 592.710 kb on - strand, within MPMX26_00562at 592.710 kb on - strand, within MPMX26_00562at 592.710 kb on - strand, within MPMX26_00562at 592.710 kb on - strand, within MPMX26_00562at 592.782 kb on - strand, within MPMX26_00562at 592.815 kb on - strand, within MPMX26_00562at 592.816 kb on - strand, within MPMX26_00562at 592.816 kb on - strand, within MPMX26_00562at 592.849 kb on - strand, within MPMX26_00562at 592.849 kb on - strand, within MPMX26_00562at 592.849 kb on - strand, within MPMX26_00562at 592.849 kb on - strand, within MPMX26_00562at 592.849 kb on - strand, within MPMX26_00562at 592.849 kb on - strand, within MPMX26_00562at 592.854 kb on - strand, within MPMX26_00562at 592.896 kb on - strand, within MPMX26_00562at 592.899 kb on - strand, within MPMX26_00562at 592.933 kb on - strand, within MPMX26_00562at 592.990 kb on - strand, within MPMX26_00562at 592.995 kb on - strand, within MPMX26_00562at 593.148 kb on - strand, within MPMX26_00562at 593.175 kb on - strand, within MPMX26_00562at 593.175 kb on - strand, within MPMX26_00562at 593.175 kb on - strand, within MPMX26_00562at 593.175 kb on - strand, within MPMX26_00562at 593.175 kb on - strand, within MPMX26_00562at 593.175 kb on - strand, within MPMX26_00562at 593.175 kb on - strand, within MPMX26_00562at 593.175 kb on - strand, within MPMX26_00562at 593.175 kb on - strand, within MPMX26_00562at 593.175 kb on - strand, within MPMX26_00562at 593.175 kb on - strand, within MPMX26_00562at 593.175 kb on - strand, within MPMX26_00562at 593.319 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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591,943 + -1.4
591,943 + -0.6
591,962 + -0.3
592,003 + -0.2
592,435 - +0.0
592,474 - MPMX26_00562 0.12 +1.0
592,474 - MPMX26_00562 0.12 +0.8
592,490 - MPMX26_00562 0.13 +1.3
592,500 - MPMX26_00562 0.14 +1.5
592,500 - MPMX26_00562 0.14 +0.5
592,500 - MPMX26_00562 0.14 -0.3
592,528 - MPMX26_00562 0.17 -0.0
592,530 - MPMX26_00562 0.17 +0.4
592,543 - MPMX26_00562 0.18 -0.3
592,543 - MPMX26_00562 0.18 -0.3
592,543 - MPMX26_00562 0.18 -0.8
592,543 - MPMX26_00562 0.18 -0.2
592,543 - MPMX26_00562 0.18 -0.4
592,543 - MPMX26_00562 0.18 +0.3
592,578 - MPMX26_00562 0.22 +0.6
592,581 - MPMX26_00562 0.22 -0.1
592,642 - MPMX26_00562 0.28 +2.5
592,642 - MPMX26_00562 0.28 +0.1
592,642 - MPMX26_00562 0.28 -0.3
592,642 - MPMX26_00562 0.28 -0.8
592,642 - MPMX26_00562 0.28 -1.5
592,642 - MPMX26_00562 0.28 -0.1
592,642 - MPMX26_00562 0.28 -0.6
592,710 - MPMX26_00562 0.35 +0.1
592,710 - MPMX26_00562 0.35 +1.0
592,710 - MPMX26_00562 0.35 +1.2
592,710 - MPMX26_00562 0.35 +0.3
592,710 - MPMX26_00562 0.35 +0.7
592,710 - MPMX26_00562 0.35 -1.1
592,710 - MPMX26_00562 0.35 +0.2
592,710 - MPMX26_00562 0.35 -0.1
592,710 - MPMX26_00562 0.35 +1.3
592,710 - MPMX26_00562 0.35 +0.1
592,710 - MPMX26_00562 0.35 +1.0
592,710 - MPMX26_00562 0.35 +0.1
592,782 - MPMX26_00562 0.42 -0.4
592,815 - MPMX26_00562 0.45 +0.1
592,816 - MPMX26_00562 0.45 +0.9
592,816 - MPMX26_00562 0.45 +1.5
592,849 - MPMX26_00562 0.48 -0.0
592,849 - MPMX26_00562 0.48 -0.2
592,849 - MPMX26_00562 0.48 -0.8
592,849 - MPMX26_00562 0.48 +0.1
592,849 - MPMX26_00562 0.48 -0.6
592,849 - MPMX26_00562 0.48 -0.6
592,854 - MPMX26_00562 0.48 -0.4
592,896 - MPMX26_00562 0.53 +0.2
592,899 - MPMX26_00562 0.53 -1.3
592,933 - MPMX26_00562 0.56 +0.2
592,990 - MPMX26_00562 0.62 -0.2
592,995 - MPMX26_00562 0.62 +0.1
593,148 - MPMX26_00562 0.77 -0.6
593,175 - MPMX26_00562 0.79 -0.4
593,175 - MPMX26_00562 0.79 +1.7
593,175 - MPMX26_00562 0.79 +1.5
593,175 - MPMX26_00562 0.79 +0.2
593,175 - MPMX26_00562 0.79 +0.2
593,175 - MPMX26_00562 0.79 +2.5
593,175 - MPMX26_00562 0.79 +1.1
593,175 - MPMX26_00562 0.79 -0.3
593,175 - MPMX26_00562 0.79 +2.1
593,175 - MPMX26_00562 0.79 -0.3
593,175 - MPMX26_00562 0.79 +2.0
593,175 - MPMX26_00562 0.79 -0.3
593,319 - +1.1

Or see this region's nucleotide sequence