Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00476

Experiment: no stress control

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_00475 and MPMX26_00476 are separated by 160 nucleotidesMPMX26_00476 and MPMX26_00477 are separated by 72 nucleotidesMPMX26_00477 and MPMX26_00478 are separated by 91 nucleotides MPMX26_00475: MPMX26_00475 - putative signaling protein, at 513,412 to 515,481 _00475 MPMX26_00476: MPMX26_00476 - Peptide chain release factor RF3, at 515,642 to 517,231 _00476 MPMX26_00477: MPMX26_00477 - hypothetical protein, at 517,304 to 518,125 _00477 MPMX26_00478: MPMX26_00478 - hypothetical protein, at 518,217 to 519,194 _00478 Position (kb) 515 516 517 518Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 514.648 kb on + strand, within MPMX26_00475at 514.690 kb on + strand, within MPMX26_00475at 514.695 kb on + strand, within MPMX26_00475at 514.734 kb on + strand, within MPMX26_00475at 514.734 kb on + strand, within MPMX26_00475at 514.734 kb on + strand, within MPMX26_00475at 514.734 kb on + strand, within MPMX26_00475at 514.734 kb on + strand, within MPMX26_00475at 514.734 kb on + strand, within MPMX26_00475at 514.734 kb on + strand, within MPMX26_00475at 514.734 kb on + strand, within MPMX26_00475at 514.734 kb on + strand, within MPMX26_00475at 514.813 kb on + strand, within MPMX26_00475at 514.819 kb on + strand, within MPMX26_00475at 514.843 kb on + strand, within MPMX26_00475at 515.028 kb on + strand, within MPMX26_00475at 515.058 kb on + strand, within MPMX26_00475at 515.353 kb on + strandat 515.353 kb on + strandat 515.363 kb on + strandat 515.389 kb on + strandat 515.389 kb on + strandat 515.440 kb on + strandat 515.544 kb on + strandat 515.618 kb on + strandat 515.654 kb on + strandat 515.668 kb on + strandat 515.704 kb on + strandat 515.704 kb on + strandat 515.749 kb on + strandat 515.749 kb on + strandat 515.749 kb on + strandat 515.749 kb on + strandat 515.749 kb on + strandat 515.777 kb on + strandat 515.791 kb on + strandat 515.808 kb on + strand, within MPMX26_00476at 515.808 kb on + strand, within MPMX26_00476at 515.940 kb on + strand, within MPMX26_00476at 515.940 kb on + strand, within MPMX26_00476at 515.940 kb on + strand, within MPMX26_00476at 515.954 kb on + strand, within MPMX26_00476at 515.954 kb on + strand, within MPMX26_00476at 515.954 kb on + strand, within MPMX26_00476at 515.986 kb on + strand, within MPMX26_00476at 515.986 kb on + strand, within MPMX26_00476at 515.986 kb on + strand, within MPMX26_00476at 515.994 kb on + strand, within MPMX26_00476at 515.994 kb on + strand, within MPMX26_00476at 515.994 kb on + strand, within MPMX26_00476at 515.994 kb on + strand, within MPMX26_00476at 515.994 kb on + strand, within MPMX26_00476at 515.994 kb on + strand, within MPMX26_00476at 515.994 kb on + strand, within MPMX26_00476at 515.994 kb on + strand, within MPMX26_00476at 515.994 kb on + strand, within MPMX26_00476at 515.994 kb on + strand, within MPMX26_00476at 516.039 kb on + strand, within MPMX26_00476at 516.085 kb on + strand, within MPMX26_00476at 516.159 kb on + strand, within MPMX26_00476at 516.185 kb on + strand, within MPMX26_00476at 516.185 kb on + strand, within MPMX26_00476at 516.185 kb on + strand, within MPMX26_00476at 516.185 kb on + strand, within MPMX26_00476at 516.185 kb on + strand, within MPMX26_00476at 516.185 kb on + strand, within MPMX26_00476at 516.185 kb on + strand, within MPMX26_00476at 516.207 kb on + strand, within MPMX26_00476at 516.211 kb on + strand, within MPMX26_00476at 516.229 kb on + strand, within MPMX26_00476at 516.234 kb on + strand, within MPMX26_00476at 516.234 kb on + strand, within MPMX26_00476at 516.250 kb on + strand, within MPMX26_00476at 516.302 kb on + strand, within MPMX26_00476at 516.302 kb on + strand, within MPMX26_00476at 516.302 kb on + strand, within MPMX26_00476at 516.318 kb on + strand, within MPMX26_00476at 516.336 kb on + strand, within MPMX26_00476at 516.366 kb on + strand, within MPMX26_00476at 516.385 kb on + strand, within MPMX26_00476at 516.385 kb on + strand, within MPMX26_00476at 516.391 kb on + strand, within MPMX26_00476at 516.406 kb on + strand, within MPMX26_00476at 516.406 kb on + strand, within MPMX26_00476at 516.406 kb on + strand, within MPMX26_00476at 516.406 kb on + strand, within MPMX26_00476at 516.411 kb on + strand, within MPMX26_00476at 516.416 kb on + strand, within MPMX26_00476at 516.416 kb on + strand, within MPMX26_00476at 516.416 kb on + strand, within MPMX26_00476at 516.427 kb on + strand, within MPMX26_00476at 516.491 kb on + strand, within MPMX26_00476at 516.491 kb on + strand, within MPMX26_00476at 516.598 kb on + strand, within MPMX26_00476at 516.623 kb on + strand, within MPMX26_00476at 516.659 kb on + strand, within MPMX26_00476at 516.669 kb on + strand, within MPMX26_00476at 516.669 kb on + strand, within MPMX26_00476at 516.669 kb on + strand, within MPMX26_00476at 516.669 kb on + strand, within MPMX26_00476at 516.669 kb on + strand, within MPMX26_00476at 516.674 kb on + strand, within MPMX26_00476at 516.753 kb on + strand, within MPMX26_00476at 516.784 kb on + strand, within MPMX26_00476at 516.807 kb on + strand, within MPMX26_00476at 516.809 kb on + strand, within MPMX26_00476at 516.809 kb on + strand, within MPMX26_00476at 516.817 kb on + strand, within MPMX26_00476at 516.846 kb on + strand, within MPMX26_00476at 516.860 kb on + strand, within MPMX26_00476at 516.884 kb on + strand, within MPMX26_00476at 516.909 kb on + strand, within MPMX26_00476at 516.929 kb on + strand, within MPMX26_00476at 516.934 kb on + strand, within MPMX26_00476at 516.939 kb on + strand, within MPMX26_00476at 516.939 kb on + strand, within MPMX26_00476at 516.966 kb on + strand, within MPMX26_00476at 516.966 kb on + strand, within MPMX26_00476at 516.966 kb on + strand, within MPMX26_00476at 516.966 kb on + strand, within MPMX26_00476at 516.968 kb on + strand, within MPMX26_00476at 516.968 kb on + strand, within MPMX26_00476at 516.971 kb on + strand, within MPMX26_00476at 517.002 kb on + strand, within MPMX26_00476at 517.015 kb on + strand, within MPMX26_00476at 517.023 kb on + strand, within MPMX26_00476at 517.026 kb on + strand, within MPMX26_00476at 517.041 kb on + strand, within MPMX26_00476at 517.041 kb on + strand, within MPMX26_00476at 517.041 kb on + strand, within MPMX26_00476at 517.112 kb on + strandat 517.120 kb on + strandat 517.122 kb on + strandat 517.122 kb on + strandat 517.122 kb on + strandat 517.131 kb on + strandat 517.139 kb on + strandat 517.139 kb on + strandat 517.139 kb on + strandat 517.149 kb on + strandat 517.149 kb on + strandat 517.154 kb on + strandat 517.154 kb on + strandat 517.164 kb on + strandat 517.227 kb on + strandat 517.241 kb on + strandat 517.331 kb on + strandat 517.346 kb on + strandat 517.790 kb on + strand, within MPMX26_00477at 518.009 kb on + strand, within MPMX26_00477

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
remove
514,648 + MPMX26_00475 0.60 -0.3
514,690 + MPMX26_00475 0.62 +2.5
514,695 + MPMX26_00475 0.62 +6.3
514,734 + MPMX26_00475 0.64 +4.5
514,734 + MPMX26_00475 0.64 +4.5
514,734 + MPMX26_00475 0.64 +3.5
514,734 + MPMX26_00475 0.64 +3.4
514,734 + MPMX26_00475 0.64 +3.9
514,734 + MPMX26_00475 0.64 +4.2
514,734 + MPMX26_00475 0.64 +6.2
514,734 + MPMX26_00475 0.64 +3.7
514,734 + MPMX26_00475 0.64 +1.3
514,813 + MPMX26_00475 0.68 +2.4
514,819 + MPMX26_00475 0.68 +3.1
514,843 + MPMX26_00475 0.69 +4.6
515,028 + MPMX26_00475 0.78 +4.9
515,058 + MPMX26_00475 0.80 +4.4
515,353 + +2.7
515,353 + +3.6
515,363 + +2.5
515,389 + +1.2
515,389 + +0.9
515,440 + +2.4
515,544 + +0.4
515,618 + +0.2
515,654 + -1.2
515,668 + -1.3
515,704 + -1.6
515,704 + -0.1
515,749 + +2.2
515,749 + -1.3
515,749 + +1.4
515,749 + -1.4
515,749 + -0.5
515,777 + +0.2
515,791 + +0.8
515,808 + MPMX26_00476 0.10 -0.4
515,808 + MPMX26_00476 0.10 +0.0
515,940 + MPMX26_00476 0.19 -0.2
515,940 + MPMX26_00476 0.19 -0.8
515,940 + MPMX26_00476 0.19 -1.3
515,954 + MPMX26_00476 0.20 +0.0
515,954 + MPMX26_00476 0.20 +0.5
515,954 + MPMX26_00476 0.20 -0.1
515,986 + MPMX26_00476 0.22 -0.5
515,986 + MPMX26_00476 0.22 -1.2
515,986 + MPMX26_00476 0.22 -0.5
515,994 + MPMX26_00476 0.22 -0.3
515,994 + MPMX26_00476 0.22 -1.0
515,994 + MPMX26_00476 0.22 -0.1
515,994 + MPMX26_00476 0.22 -1.4
515,994 + MPMX26_00476 0.22 +0.9
515,994 + MPMX26_00476 0.22 -1.3
515,994 + MPMX26_00476 0.22 -0.6
515,994 + MPMX26_00476 0.22 -0.5
515,994 + MPMX26_00476 0.22 -0.6
515,994 + MPMX26_00476 0.22 -0.2
516,039 + MPMX26_00476 0.25 -1.3
516,085 + MPMX26_00476 0.28 +0.1
516,159 + MPMX26_00476 0.33 +0.0
516,185 + MPMX26_00476 0.34 +0.7
516,185 + MPMX26_00476 0.34 +0.5
516,185 + MPMX26_00476 0.34 -0.9
516,185 + MPMX26_00476 0.34 -1.2
516,185 + MPMX26_00476 0.34 +0.0
516,185 + MPMX26_00476 0.34 +1.5
516,185 + MPMX26_00476 0.34 -0.3
516,207 + MPMX26_00476 0.36 -0.9
516,211 + MPMX26_00476 0.36 -0.6
516,229 + MPMX26_00476 0.37 -0.6
516,234 + MPMX26_00476 0.37 -0.8
516,234 + MPMX26_00476 0.37 +1.3
516,250 + MPMX26_00476 0.38 -2.1
516,302 + MPMX26_00476 0.42 -0.3
516,302 + MPMX26_00476 0.42 +0.4
516,302 + MPMX26_00476 0.42 -0.6
516,318 + MPMX26_00476 0.43 +1.3
516,336 + MPMX26_00476 0.44 -0.5
516,366 + MPMX26_00476 0.46 -1.1
516,385 + MPMX26_00476 0.47 -0.4
516,385 + MPMX26_00476 0.47 +0.2
516,391 + MPMX26_00476 0.47 +0.5
516,406 + MPMX26_00476 0.48 -1.9
516,406 + MPMX26_00476 0.48 -0.2
516,406 + MPMX26_00476 0.48 -0.9
516,406 + MPMX26_00476 0.48 -0.6
516,411 + MPMX26_00476 0.48 -0.2
516,416 + MPMX26_00476 0.49 -0.2
516,416 + MPMX26_00476 0.49 -0.3
516,416 + MPMX26_00476 0.49 -0.8
516,427 + MPMX26_00476 0.49 -0.7
516,491 + MPMX26_00476 0.53 -0.8
516,491 + MPMX26_00476 0.53 -0.3
516,598 + MPMX26_00476 0.60 -2.1
516,623 + MPMX26_00476 0.62 -0.9
516,659 + MPMX26_00476 0.64 -0.5
516,669 + MPMX26_00476 0.65 +0.4
516,669 + MPMX26_00476 0.65 -1.9
516,669 + MPMX26_00476 0.65 -0.9
516,669 + MPMX26_00476 0.65 -0.5
516,669 + MPMX26_00476 0.65 -1.5
516,674 + MPMX26_00476 0.65 -1.4
516,753 + MPMX26_00476 0.70 +2.5
516,784 + MPMX26_00476 0.72 -0.5
516,807 + MPMX26_00476 0.73 +0.4
516,809 + MPMX26_00476 0.73 -1.6
516,809 + MPMX26_00476 0.73 -1.7
516,817 + MPMX26_00476 0.74 -0.5
516,846 + MPMX26_00476 0.76 -1.6
516,860 + MPMX26_00476 0.77 -1.4
516,884 + MPMX26_00476 0.78 -0.1
516,909 + MPMX26_00476 0.80 -0.4
516,929 + MPMX26_00476 0.81 -2.4
516,934 + MPMX26_00476 0.81 +1.2
516,939 + MPMX26_00476 0.82 -1.2
516,939 + MPMX26_00476 0.82 -0.6
516,966 + MPMX26_00476 0.83 -0.3
516,966 + MPMX26_00476 0.83 -0.5
516,966 + MPMX26_00476 0.83 -0.6
516,966 + MPMX26_00476 0.83 -0.8
516,968 + MPMX26_00476 0.83 -2.7
516,968 + MPMX26_00476 0.83 -2.5
516,971 + MPMX26_00476 0.84 +2.5
517,002 + MPMX26_00476 0.86 -1.5
517,015 + MPMX26_00476 0.86 -1.5
517,023 + MPMX26_00476 0.87 -1.5
517,026 + MPMX26_00476 0.87 -0.1
517,041 + MPMX26_00476 0.88 -0.2
517,041 + MPMX26_00476 0.88 -1.3
517,041 + MPMX26_00476 0.88 -1.8
517,112 + -0.3
517,120 + +0.5
517,122 + -1.4
517,122 + -0.3
517,122 + +1.1
517,131 + -0.6
517,139 + -0.3
517,139 + +1.1
517,139 + -0.8
517,149 + -1.3
517,149 + -0.6
517,154 + -0.6
517,154 + -0.6
517,164 + +0.8
517,227 + +0.2
517,241 + +0.3
517,331 + +0.9
517,346 + -1.1
517,790 + MPMX26_00477 0.59 +1.4
518,009 + MPMX26_00477 0.86 -0.6

Or see this region's nucleotide sequence