Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00378

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00376 and MPMX26_00377 are separated by 115 nucleotidesMPMX26_00377 and MPMX26_00378 are separated by 95 nucleotidesMPMX26_00378 and MPMX26_00379 are separated by 213 nucleotides MPMX26_00376: MPMX26_00376 - Coniferyl aldehyde dehydrogenase, at 406,969 to 408,417 _00376 MPMX26_00377: MPMX26_00377 - hypothetical protein, at 408,533 to 409,219 _00377 MPMX26_00378: MPMX26_00378 - Formyltetrahydrofolate deformylase, at 409,315 to 410,181 _00378 MPMX26_00379: MPMX26_00379 - hypothetical protein, at 410,395 to 411,195 _00379 Position (kb) 409 410 411Strain fitness (log2 ratio) -3 -2 -1 0 1at 408.317 kb on - strandat 408.317 kb on - strandat 408.331 kb on - strandat 408.345 kb on - strandat 408.350 kb on - strandat 408.360 kb on - strandat 408.360 kb on - strandat 408.364 kb on - strandat 408.396 kb on - strandat 408.406 kb on - strandat 408.486 kb on + strandat 408.541 kb on + strandat 408.541 kb on + strandat 408.582 kb on + strandat 408.582 kb on + strandat 408.591 kb on + strandat 408.591 kb on + strandat 408.591 kb on + strandat 408.600 kb on + strandat 408.604 kb on + strand, within MPMX26_00377at 408.621 kb on + strand, within MPMX26_00377at 408.667 kb on + strand, within MPMX26_00377at 408.713 kb on + strand, within MPMX26_00377at 408.745 kb on + strand, within MPMX26_00377at 408.745 kb on + strand, within MPMX26_00377at 408.745 kb on + strand, within MPMX26_00377at 408.745 kb on + strand, within MPMX26_00377at 408.766 kb on + strand, within MPMX26_00377at 408.766 kb on + strand, within MPMX26_00377at 408.814 kb on + strand, within MPMX26_00377at 408.911 kb on + strand, within MPMX26_00377at 408.919 kb on + strand, within MPMX26_00377at 408.993 kb on + strand, within MPMX26_00377at 408.993 kb on + strand, within MPMX26_00377at 408.993 kb on + strand, within MPMX26_00377at 408.993 kb on + strand, within MPMX26_00377at 408.993 kb on + strand, within MPMX26_00377at 408.993 kb on + strand, within MPMX26_00377at 408.993 kb on + strand, within MPMX26_00377at 408.993 kb on + strand, within MPMX26_00377at 409.000 kb on + strand, within MPMX26_00377at 409.010 kb on + strand, within MPMX26_00377at 409.010 kb on + strand, within MPMX26_00377at 409.023 kb on + strand, within MPMX26_00377at 409.041 kb on + strand, within MPMX26_00377at 409.046 kb on + strand, within MPMX26_00377at 409.051 kb on + strand, within MPMX26_00377at 409.089 kb on + strand, within MPMX26_00377at 409.099 kb on + strand, within MPMX26_00377at 409.099 kb on + strand, within MPMX26_00377at 409.121 kb on + strand, within MPMX26_00377at 409.121 kb on + strand, within MPMX26_00377at 409.121 kb on + strand, within MPMX26_00377at 409.122 kb on + strand, within MPMX26_00377at 409.122 kb on + strand, within MPMX26_00377at 409.122 kb on + strand, within MPMX26_00377at 409.122 kb on + strand, within MPMX26_00377at 409.122 kb on + strand, within MPMX26_00377at 409.122 kb on + strand, within MPMX26_00377at 409.122 kb on + strand, within MPMX26_00377at 409.122 kb on + strand, within MPMX26_00377at 409.122 kb on + strand, within MPMX26_00377at 409.136 kb on + strand, within MPMX26_00377at 409.182 kb on + strandat 409.182 kb on + strandat 409.182 kb on + strandat 409.182 kb on + strandat 409.182 kb on + strandat 409.204 kb on + strandat 409.204 kb on + strandat 409.241 kb on + strandat 409.317 kb on + strandat 409.328 kb on + strandat 409.329 kb on + strandat 409.339 kb on + strandat 409.358 kb on + strandat 409.378 kb on + strandat 409.412 kb on + strand, within MPMX26_00378at 409.427 kb on + strand, within MPMX26_00378at 409.482 kb on + strand, within MPMX26_00378at 409.509 kb on + strand, within MPMX26_00378at 409.511 kb on + strand, within MPMX26_00378at 409.517 kb on + strand, within MPMX26_00378at 409.521 kb on + strand, within MPMX26_00378at 409.522 kb on + strand, within MPMX26_00378at 409.522 kb on + strand, within MPMX26_00378at 409.522 kb on + strand, within MPMX26_00378at 409.522 kb on + strand, within MPMX26_00378at 409.529 kb on + strand, within MPMX26_00378at 409.529 kb on + strand, within MPMX26_00378at 409.529 kb on + strand, within MPMX26_00378at 409.541 kb on + strand, within MPMX26_00378at 409.541 kb on + strand, within MPMX26_00378at 409.625 kb on + strand, within MPMX26_00378at 409.630 kb on + strand, within MPMX26_00378at 409.644 kb on + strand, within MPMX26_00378at 409.644 kb on + strand, within MPMX26_00378at 409.649 kb on + strand, within MPMX26_00378at 409.664 kb on + strand, within MPMX26_00378at 409.664 kb on + strand, within MPMX26_00378at 409.666 kb on + strand, within MPMX26_00378at 409.666 kb on + strand, within MPMX26_00378at 409.718 kb on + strand, within MPMX26_00378at 409.718 kb on + strand, within MPMX26_00378at 409.723 kb on + strand, within MPMX26_00378at 409.723 kb on + strand, within MPMX26_00378at 409.723 kb on + strand, within MPMX26_00378at 409.738 kb on + strand, within MPMX26_00378at 409.748 kb on + strand, within MPMX26_00378at 409.753 kb on + strand, within MPMX26_00378at 409.777 kb on + strand, within MPMX26_00378at 409.812 kb on + strand, within MPMX26_00378at 409.812 kb on + strand, within MPMX26_00378at 409.814 kb on + strand, within MPMX26_00378at 409.819 kb on + strand, within MPMX26_00378at 409.824 kb on + strand, within MPMX26_00378at 409.838 kb on + strand, within MPMX26_00378at 409.861 kb on + strand, within MPMX26_00378at 409.861 kb on + strand, within MPMX26_00378at 409.919 kb on + strand, within MPMX26_00378at 409.928 kb on + strand, within MPMX26_00378at 409.929 kb on + strand, within MPMX26_00378at 409.929 kb on + strand, within MPMX26_00378at 409.961 kb on + strand, within MPMX26_00378at 409.961 kb on + strand, within MPMX26_00378at 409.976 kb on + strand, within MPMX26_00378at 409.984 kb on + strand, within MPMX26_00378at 410.033 kb on + strand, within MPMX26_00378at 410.043 kb on + strand, within MPMX26_00378at 410.047 kb on + strand, within MPMX26_00378at 410.047 kb on + strand, within MPMX26_00378at 410.055 kb on + strand, within MPMX26_00378at 410.055 kb on + strand, within MPMX26_00378at 410.055 kb on + strand, within MPMX26_00378at 410.055 kb on + strand, within MPMX26_00378at 410.055 kb on + strand, within MPMX26_00378at 410.055 kb on + strand, within MPMX26_00378at 410.072 kb on + strand, within MPMX26_00378at 410.078 kb on + strand, within MPMX26_00378at 410.088 kb on + strand, within MPMX26_00378at 410.092 kb on + strand, within MPMX26_00378at 410.104 kb on + strandat 410.104 kb on + strandat 410.104 kb on + strandat 410.115 kb on + strandat 410.123 kb on + strandat 410.131 kb on + strandat 410.208 kb on + strandat 410.322 kb on + strandat 410.322 kb on + strandat 410.336 kb on + strandat 410.336 kb on + strandat 410.357 kb on + strandat 410.357 kb on + strandat 410.363 kb on + strandat 410.380 kb on + strandat 410.412 kb on + strandat 410.426 kb on + strandat 410.427 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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408,317 - -0.8
408,317 - -0.9
408,331 - -0.0
408,345 - +0.2
408,350 - +0.0
408,360 - -0.4
408,360 - -0.1
408,364 - -0.1
408,396 - +0.1
408,406 - -1.1
408,486 + +0.1
408,541 + -1.8
408,541 + -1.2
408,582 + -0.9
408,582 + -0.2
408,591 + -0.5
408,591 + -0.5
408,591 + -0.2
408,600 + +0.5
408,604 + MPMX26_00377 0.10 -1.7
408,621 + MPMX26_00377 0.13 -0.7
408,667 + MPMX26_00377 0.20 -1.9
408,713 + MPMX26_00377 0.26 -1.0
408,745 + MPMX26_00377 0.31 +0.3
408,745 + MPMX26_00377 0.31 -1.3
408,745 + MPMX26_00377 0.31 -0.6
408,745 + MPMX26_00377 0.31 -0.7
408,766 + MPMX26_00377 0.34 -1.1
408,766 + MPMX26_00377 0.34 -1.0
408,814 + MPMX26_00377 0.41 -0.6
408,911 + MPMX26_00377 0.55 -1.5
408,919 + MPMX26_00377 0.56 -1.5
408,993 + MPMX26_00377 0.67 -0.5
408,993 + MPMX26_00377 0.67 -0.2
408,993 + MPMX26_00377 0.67 -1.0
408,993 + MPMX26_00377 0.67 -1.4
408,993 + MPMX26_00377 0.67 -0.0
408,993 + MPMX26_00377 0.67 -0.4
408,993 + MPMX26_00377 0.67 -2.0
408,993 + MPMX26_00377 0.67 -1.7
409,000 + MPMX26_00377 0.68 -1.6
409,010 + MPMX26_00377 0.69 -0.2
409,010 + MPMX26_00377 0.69 -1.2
409,023 + MPMX26_00377 0.71 -1.5
409,041 + MPMX26_00377 0.74 -1.3
409,046 + MPMX26_00377 0.75 -0.5
409,051 + MPMX26_00377 0.75 -1.0
409,089 + MPMX26_00377 0.81 -0.2
409,099 + MPMX26_00377 0.82 -1.4
409,099 + MPMX26_00377 0.82 -1.6
409,121 + MPMX26_00377 0.86 +1.0
409,121 + MPMX26_00377 0.86 -2.1
409,121 + MPMX26_00377 0.86 -0.1
409,122 + MPMX26_00377 0.86 -0.3
409,122 + MPMX26_00377 0.86 -0.6
409,122 + MPMX26_00377 0.86 -0.2
409,122 + MPMX26_00377 0.86 -0.1
409,122 + MPMX26_00377 0.86 -0.0
409,122 + MPMX26_00377 0.86 -0.8
409,122 + MPMX26_00377 0.86 -1.2
409,122 + MPMX26_00377 0.86 -0.8
409,122 + MPMX26_00377 0.86 -1.1
409,136 + MPMX26_00377 0.88 -0.6
409,182 + +0.0
409,182 + -0.4
409,182 + -0.2
409,182 + -0.2
409,182 + -0.0
409,204 + -0.3
409,204 + -1.4
409,241 + -0.6
409,317 + -1.5
409,328 + -1.0
409,329 + -1.3
409,339 + -1.1
409,358 + -0.9
409,378 + -1.6
409,412 + MPMX26_00378 0.11 +1.1
409,427 + MPMX26_00378 0.13 -0.4
409,482 + MPMX26_00378 0.19 -1.4
409,509 + MPMX26_00378 0.22 -0.1
409,511 + MPMX26_00378 0.23 -1.3
409,517 + MPMX26_00378 0.23 -1.3
409,521 + MPMX26_00378 0.24 -1.2
409,522 + MPMX26_00378 0.24 -0.4
409,522 + MPMX26_00378 0.24 -1.3
409,522 + MPMX26_00378 0.24 -0.3
409,522 + MPMX26_00378 0.24 -1.1
409,529 + MPMX26_00378 0.25 -1.0
409,529 + MPMX26_00378 0.25 -0.5
409,529 + MPMX26_00378 0.25 -0.4
409,541 + MPMX26_00378 0.26 +1.5
409,541 + MPMX26_00378 0.26 -0.7
409,625 + MPMX26_00378 0.36 -1.3
409,630 + MPMX26_00378 0.36 -3.3
409,644 + MPMX26_00378 0.38 -1.6
409,644 + MPMX26_00378 0.38 -1.5
409,649 + MPMX26_00378 0.39 -1.3
409,664 + MPMX26_00378 0.40 -1.0
409,664 + MPMX26_00378 0.40 -0.7
409,666 + MPMX26_00378 0.40 -0.8
409,666 + MPMX26_00378 0.40 -1.4
409,718 + MPMX26_00378 0.46 -0.8
409,718 + MPMX26_00378 0.46 -0.2
409,723 + MPMX26_00378 0.47 -0.4
409,723 + MPMX26_00378 0.47 -2.2
409,723 + MPMX26_00378 0.47 -2.4
409,738 + MPMX26_00378 0.49 -0.5
409,748 + MPMX26_00378 0.50 -1.7
409,753 + MPMX26_00378 0.51 -1.4
409,777 + MPMX26_00378 0.53 -1.1
409,812 + MPMX26_00378 0.57 -0.5
409,812 + MPMX26_00378 0.57 -0.5
409,814 + MPMX26_00378 0.58 -1.1
409,819 + MPMX26_00378 0.58 -0.9
409,824 + MPMX26_00378 0.59 +0.4
409,838 + MPMX26_00378 0.60 -0.7
409,861 + MPMX26_00378 0.63 -3.6
409,861 + MPMX26_00378 0.63 +0.2
409,919 + MPMX26_00378 0.70 -1.5
409,928 + MPMX26_00378 0.71 -1.4
409,929 + MPMX26_00378 0.71 -0.7
409,929 + MPMX26_00378 0.71 -0.5
409,961 + MPMX26_00378 0.75 -1.1
409,961 + MPMX26_00378 0.75 -0.9
409,976 + MPMX26_00378 0.76 -0.5
409,984 + MPMX26_00378 0.77 -2.1
410,033 + MPMX26_00378 0.83 -1.0
410,043 + MPMX26_00378 0.84 -0.4
410,047 + MPMX26_00378 0.84 -0.9
410,047 + MPMX26_00378 0.84 -1.6
410,055 + MPMX26_00378 0.85 -0.7
410,055 + MPMX26_00378 0.85 -1.9
410,055 + MPMX26_00378 0.85 -0.3
410,055 + MPMX26_00378 0.85 -1.3
410,055 + MPMX26_00378 0.85 -1.2
410,055 + MPMX26_00378 0.85 -0.5
410,072 + MPMX26_00378 0.87 -0.9
410,078 + MPMX26_00378 0.88 -1.9
410,088 + MPMX26_00378 0.89 -0.5
410,092 + MPMX26_00378 0.90 -0.7
410,104 + -0.8
410,104 + -1.8
410,104 + -1.5
410,115 + -1.9
410,123 + -0.3
410,131 + -1.0
410,208 + -0.1
410,322 + -1.0
410,322 + -0.7
410,336 + -0.9
410,336 + -0.6
410,357 + +0.7
410,357 + -0.1
410,363 + +1.4
410,380 + -0.2
410,412 + -0.6
410,426 + +1.0
410,427 + +1.5

Or see this region's nucleotide sequence