Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00082

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00081 and MPMX26_00082 are separated by 10 nucleotidesMPMX26_00082 and MPMX26_00083 are separated by 12 nucleotides MPMX26_00081: MPMX26_00081 - hypothetical protein, at 88,430 to 91,747 _00081 MPMX26_00082: MPMX26_00082 - hypothetical protein, at 91,758 to 93,803 _00082 MPMX26_00083: MPMX26_00083 - hypothetical protein, at 93,816 to 94,517 _00083 Position (kb) 91 92 93 94Strain fitness (log2 ratio) -2 -1 0 1 2 3at 90.833 kb on + strand, within MPMX26_00081at 90.833 kb on + strand, within MPMX26_00081at 90.833 kb on + strand, within MPMX26_00081at 90.854 kb on + strand, within MPMX26_00081at 90.880 kb on + strand, within MPMX26_00081at 90.995 kb on + strand, within MPMX26_00081at 91.028 kb on + strand, within MPMX26_00081at 91.028 kb on + strand, within MPMX26_00081at 91.028 kb on + strand, within MPMX26_00081at 91.028 kb on + strand, within MPMX26_00081at 91.083 kb on + strand, within MPMX26_00081at 91.138 kb on + strand, within MPMX26_00081at 91.138 kb on + strand, within MPMX26_00081at 91.211 kb on + strand, within MPMX26_00081at 91.290 kb on + strand, within MPMX26_00081at 91.320 kb on + strand, within MPMX26_00081at 91.351 kb on + strand, within MPMX26_00081at 91.372 kb on + strand, within MPMX26_00081at 91.372 kb on + strand, within MPMX26_00081at 91.373 kb on + strand, within MPMX26_00081at 91.378 kb on + strand, within MPMX26_00081at 91.378 kb on + strand, within MPMX26_00081at 91.378 kb on + strand, within MPMX26_00081at 91.378 kb on + strand, within MPMX26_00081at 91.378 kb on + strand, within MPMX26_00081at 91.378 kb on + strand, within MPMX26_00081at 91.453 kb on + strandat 91.490 kb on + strandat 91.490 kb on + strandat 91.496 kb on + strandat 91.557 kb on + strandat 91.565 kb on - strandat 91.602 kb on + strandat 92.142 kb on + strand, within MPMX26_00082at 92.193 kb on + strand, within MPMX26_00082at 92.294 kb on + strand, within MPMX26_00082at 92.483 kb on + strand, within MPMX26_00082at 92.531 kb on + strand, within MPMX26_00082at 92.547 kb on + strand, within MPMX26_00082at 92.661 kb on + strand, within MPMX26_00082at 92.781 kb on + strand, within MPMX26_00082at 92.825 kb on + strand, within MPMX26_00082at 92.873 kb on + strand, within MPMX26_00082at 92.882 kb on + strand, within MPMX26_00082at 92.882 kb on + strand, within MPMX26_00082at 92.930 kb on + strand, within MPMX26_00082at 92.998 kb on + strand, within MPMX26_00082at 92.999 kb on + strand, within MPMX26_00082at 93.020 kb on + strand, within MPMX26_00082at 93.020 kb on + strand, within MPMX26_00082at 93.020 kb on + strand, within MPMX26_00082at 93.059 kb on + strand, within MPMX26_00082at 93.059 kb on + strand, within MPMX26_00082at 93.089 kb on + strand, within MPMX26_00082at 93.089 kb on + strand, within MPMX26_00082at 93.149 kb on + strand, within MPMX26_00082at 93.216 kb on + strand, within MPMX26_00082at 93.216 kb on + strand, within MPMX26_00082at 93.218 kb on + strand, within MPMX26_00082at 93.278 kb on + strand, within MPMX26_00082at 93.278 kb on + strand, within MPMX26_00082at 93.327 kb on + strand, within MPMX26_00082at 93.351 kb on + strand, within MPMX26_00082at 93.399 kb on + strand, within MPMX26_00082at 93.407 kb on + strand, within MPMX26_00082at 93.407 kb on + strand, within MPMX26_00082at 93.407 kb on + strand, within MPMX26_00082at 93.439 kb on + strand, within MPMX26_00082at 93.467 kb on + strand, within MPMX26_00082at 93.467 kb on + strand, within MPMX26_00082at 93.467 kb on + strand, within MPMX26_00082at 93.600 kb on + strandat 93.611 kb on + strandat 93.719 kb on + strandat 93.724 kb on + strandat 93.732 kb on + strandat 93.742 kb on + strandat 93.742 kb on + strandat 93.747 kb on + strandat 93.752 kb on + strandat 93.752 kb on + strandat 93.752 kb on + strandat 93.752 kb on + strandat 93.761 kb on + strandat 93.766 kb on + strandat 93.766 kb on + strandat 93.802 kb on + strandat 93.802 kb on + strandat 94.108 kb on + strand, within MPMX26_00083at 94.108 kb on + strand, within MPMX26_00083at 94.108 kb on + strand, within MPMX26_00083at 94.124 kb on + strand, within MPMX26_00083at 94.204 kb on + strand, within MPMX26_00083at 94.232 kb on + strand, within MPMX26_00083at 94.282 kb on + strand, within MPMX26_00083at 94.292 kb on + strand, within MPMX26_00083at 94.300 kb on + strand, within MPMX26_00083at 94.313 kb on + strand, within MPMX26_00083at 94.328 kb on + strand, within MPMX26_00083at 94.343 kb on + strand, within MPMX26_00083at 94.351 kb on - strand, within MPMX26_00083at 94.370 kb on + strand, within MPMX26_00083at 94.388 kb on + strand, within MPMX26_00083at 94.419 kb on + strand, within MPMX26_00083at 94.480 kb on + strandat 94.487 kb on + strandat 94.523 kb on + strandat 94.543 kb on + strandat 94.548 kb on + strandat 94.549 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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90,833 + MPMX26_00081 0.72 -0.1
90,833 + MPMX26_00081 0.72 +0.1
90,833 + MPMX26_00081 0.72 +0.6
90,854 + MPMX26_00081 0.73 -0.5
90,880 + MPMX26_00081 0.74 -0.1
90,995 + MPMX26_00081 0.77 +0.6
91,028 + MPMX26_00081 0.78 -0.3
91,028 + MPMX26_00081 0.78 -0.6
91,028 + MPMX26_00081 0.78 +0.2
91,028 + MPMX26_00081 0.78 +1.5
91,083 + MPMX26_00081 0.80 +0.8
91,138 + MPMX26_00081 0.82 +0.0
91,138 + MPMX26_00081 0.82 +0.9
91,211 + MPMX26_00081 0.84 +0.5
91,290 + MPMX26_00081 0.86 -1.0
91,320 + MPMX26_00081 0.87 +0.2
91,351 + MPMX26_00081 0.88 +0.0
91,372 + MPMX26_00081 0.89 +2.0
91,372 + MPMX26_00081 0.89 -2.2
91,373 + MPMX26_00081 0.89 +0.1
91,378 + MPMX26_00081 0.89 -0.2
91,378 + MPMX26_00081 0.89 -0.4
91,378 + MPMX26_00081 0.89 -0.9
91,378 + MPMX26_00081 0.89 -1.6
91,378 + MPMX26_00081 0.89 -0.1
91,378 + MPMX26_00081 0.89 -0.1
91,453 + -0.6
91,490 + -0.2
91,490 + +0.4
91,496 + -0.0
91,557 + +0.5
91,565 - -1.5
91,602 + +3.5
92,142 + MPMX26_00082 0.19 +1.5
92,193 + MPMX26_00082 0.21 -0.0
92,294 + MPMX26_00082 0.26 +0.5
92,483 + MPMX26_00082 0.35 -1.4
92,531 + MPMX26_00082 0.38 -0.3
92,547 + MPMX26_00082 0.39 +0.2
92,661 + MPMX26_00082 0.44 +1.5
92,781 + MPMX26_00082 0.50 +0.6
92,825 + MPMX26_00082 0.52 -0.8
92,873 + MPMX26_00082 0.54 -0.0
92,882 + MPMX26_00082 0.55 +0.9
92,882 + MPMX26_00082 0.55 -1.9
92,930 + MPMX26_00082 0.57 +0.7
92,998 + MPMX26_00082 0.61 +0.2
92,999 + MPMX26_00082 0.61 +0.7
93,020 + MPMX26_00082 0.62 -0.5
93,020 + MPMX26_00082 0.62 +0.4
93,020 + MPMX26_00082 0.62 +0.3
93,059 + MPMX26_00082 0.64 +1.0
93,059 + MPMX26_00082 0.64 +0.0
93,089 + MPMX26_00082 0.65 +0.8
93,089 + MPMX26_00082 0.65 -0.2
93,149 + MPMX26_00082 0.68 -1.2
93,216 + MPMX26_00082 0.71 -0.3
93,216 + MPMX26_00082 0.71 -0.2
93,218 + MPMX26_00082 0.71 +1.1
93,278 + MPMX26_00082 0.74 -1.0
93,278 + MPMX26_00082 0.74 -2.1
93,327 + MPMX26_00082 0.77 -0.1
93,351 + MPMX26_00082 0.78 -0.8
93,399 + MPMX26_00082 0.80 -0.3
93,407 + MPMX26_00082 0.81 -1.6
93,407 + MPMX26_00082 0.81 +1.2
93,407 + MPMX26_00082 0.81 -0.9
93,439 + MPMX26_00082 0.82 -1.9
93,467 + MPMX26_00082 0.84 +0.4
93,467 + MPMX26_00082 0.84 +3.4
93,467 + MPMX26_00082 0.84 +0.7
93,600 + +0.1
93,611 + +0.1
93,719 + -0.7
93,724 + +0.7
93,732 + +0.0
93,742 + -0.4
93,742 + +0.4
93,747 + +0.1
93,752 + +0.5
93,752 + -1.9
93,752 + -0.0
93,752 + -0.9
93,761 + +0.1
93,766 + +0.4
93,766 + -0.8
93,802 + +0.2
93,802 + +0.2
94,108 + MPMX26_00083 0.42 -0.2
94,108 + MPMX26_00083 0.42 +0.2
94,108 + MPMX26_00083 0.42 -0.8
94,124 + MPMX26_00083 0.44 -0.3
94,204 + MPMX26_00083 0.55 -0.3
94,232 + MPMX26_00083 0.59 -0.4
94,282 + MPMX26_00083 0.66 +1.0
94,292 + MPMX26_00083 0.68 -0.6
94,300 + MPMX26_00083 0.69 -1.5
94,313 + MPMX26_00083 0.71 -0.3
94,328 + MPMX26_00083 0.73 -1.3
94,343 + MPMX26_00083 0.75 -0.7
94,351 - MPMX26_00083 0.76 +0.7
94,370 + MPMX26_00083 0.79 -1.0
94,388 + MPMX26_00083 0.81 -2.5
94,419 + MPMX26_00083 0.86 -0.2
94,480 + -0.2
94,487 + -1.0
94,523 + +0.7
94,543 + -0.3
94,548 + +0.7
94,549 - +0.2

Or see this region's nucleotide sequence