Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03061

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03059 and MPMX26_03060 are separated by 57 nucleotidesMPMX26_03060 and MPMX26_03061 are separated by 385 nucleotidesMPMX26_03061 and MPMX26_03062 are separated by 122 nucleotides MPMX26_03059: MPMX26_03059 - 3-hydroxyadipyl-CoA dehydrogenase, at 3,182,860 to 3,184,377 _03059 MPMX26_03060: MPMX26_03060 - putative protein YjdJ, at 3,184,435 to 3,184,716 _03060 MPMX26_03061: MPMX26_03061 - Putative membrane-bound redox modulator Alx, at 3,185,102 to 3,186,058 _03061 MPMX26_03062: MPMX26_03062 - Guanine deaminase, at 3,186,181 to 3,187,506 _03062 Position (kb) 3185 3186 3187Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3184.106 kb on + strand, within MPMX26_03059at 3184.111 kb on + strand, within MPMX26_03059at 3184.125 kb on + strand, within MPMX26_03059at 3184.156 kb on + strand, within MPMX26_03059at 3184.156 kb on + strand, within MPMX26_03059at 3184.156 kb on + strand, within MPMX26_03059at 3184.156 kb on + strand, within MPMX26_03059at 3184.156 kb on + strand, within MPMX26_03059at 3184.164 kb on + strand, within MPMX26_03059at 3184.164 kb on - strand, within MPMX26_03059at 3184.165 kb on + strand, within MPMX26_03059at 3184.165 kb on + strand, within MPMX26_03059at 3184.165 kb on + strand, within MPMX26_03059at 3184.175 kb on + strand, within MPMX26_03059at 3184.175 kb on + strand, within MPMX26_03059at 3184.177 kb on + strand, within MPMX26_03059at 3184.185 kb on + strand, within MPMX26_03059at 3184.202 kb on + strand, within MPMX26_03059at 3184.207 kb on + strand, within MPMX26_03059at 3184.207 kb on + strand, within MPMX26_03059at 3184.207 kb on + strand, within MPMX26_03059at 3184.207 kb on + strand, within MPMX26_03059at 3184.207 kb on + strand, within MPMX26_03059at 3184.212 kb on + strand, within MPMX26_03059at 3184.212 kb on + strand, within MPMX26_03059at 3184.248 kb on + strandat 3184.322 kb on + strandat 3184.337 kb on + strandat 3184.362 kb on + strandat 3184.362 kb on + strandat 3184.367 kb on + strandat 3184.370 kb on - strandat 3184.389 kb on + strandat 3184.391 kb on + strandat 3184.418 kb on - strandat 3184.420 kb on + strandat 3184.474 kb on - strand, within MPMX26_03060at 3184.476 kb on - strand, within MPMX26_03060at 3184.493 kb on - strand, within MPMX26_03060at 3184.498 kb on - strand, within MPMX26_03060at 3184.503 kb on - strand, within MPMX26_03060at 3184.513 kb on - strand, within MPMX26_03060at 3184.515 kb on + strand, within MPMX26_03060at 3184.549 kb on - strand, within MPMX26_03060at 3184.549 kb on - strand, within MPMX26_03060at 3184.551 kb on - strand, within MPMX26_03060at 3184.551 kb on - strand, within MPMX26_03060at 3184.582 kb on - strand, within MPMX26_03060at 3184.586 kb on - strand, within MPMX26_03060at 3184.586 kb on - strand, within MPMX26_03060at 3184.602 kb on - strand, within MPMX26_03060at 3184.602 kb on - strand, within MPMX26_03060at 3184.602 kb on - strand, within MPMX26_03060at 3184.674 kb on + strand, within MPMX26_03060at 3184.726 kb on - strandat 3184.726 kb on - strandat 3184.735 kb on - strandat 3184.828 kb on + strandat 3184.828 kb on + strandat 3184.828 kb on + strandat 3184.838 kb on + strandat 3184.857 kb on + strandat 3184.884 kb on + strandat 3184.886 kb on + strandat 3184.887 kb on + strandat 3184.896 kb on + strandat 3184.896 kb on + strandat 3184.896 kb on + strandat 3184.896 kb on + strandat 3184.896 kb on + strandat 3184.896 kb on + strandat 3184.896 kb on + strandat 3184.896 kb on + strandat 3184.901 kb on + strandat 3184.925 kb on + strandat 3184.991 kb on + strandat 3184.991 kb on + strandat 3184.991 kb on + strandat 3184.991 kb on + strandat 3184.991 kb on + strandat 3184.998 kb on + strandat 3184.998 kb on + strandat 3185.002 kb on + strandat 3185.007 kb on + strandat 3185.007 kb on + strandat 3185.007 kb on + strandat 3185.007 kb on + strandat 3185.014 kb on + strandat 3185.058 kb on + strandat 3185.087 kb on + strandat 3185.118 kb on + strandat 3185.123 kb on + strandat 3185.191 kb on + strandat 3185.197 kb on + strandat 3185.197 kb on + strandat 3185.197 kb on + strandat 3185.197 kb on + strandat 3185.235 kb on + strand, within MPMX26_03061at 3185.244 kb on + strand, within MPMX26_03061at 3185.280 kb on + strand, within MPMX26_03061at 3185.291 kb on + strand, within MPMX26_03061at 3185.299 kb on - strand, within MPMX26_03061at 3185.389 kb on - strand, within MPMX26_03061at 3185.426 kb on + strand, within MPMX26_03061at 3185.446 kb on + strand, within MPMX26_03061at 3185.447 kb on - strand, within MPMX26_03061at 3185.510 kb on + strand, within MPMX26_03061at 3185.510 kb on + strand, within MPMX26_03061at 3185.510 kb on + strand, within MPMX26_03061at 3185.510 kb on + strand, within MPMX26_03061at 3185.510 kb on + strand, within MPMX26_03061at 3185.510 kb on + strand, within MPMX26_03061at 3185.510 kb on + strand, within MPMX26_03061at 3185.554 kb on + strand, within MPMX26_03061at 3185.601 kb on + strand, within MPMX26_03061at 3185.659 kb on + strand, within MPMX26_03061at 3185.698 kb on + strand, within MPMX26_03061at 3185.708 kb on + strand, within MPMX26_03061at 3185.718 kb on + strand, within MPMX26_03061at 3185.728 kb on - strand, within MPMX26_03061at 3185.789 kb on + strand, within MPMX26_03061at 3185.793 kb on + strand, within MPMX26_03061at 3185.793 kb on + strand, within MPMX26_03061at 3185.795 kb on + strand, within MPMX26_03061at 3185.817 kb on + strand, within MPMX26_03061at 3185.849 kb on + strand, within MPMX26_03061at 3185.887 kb on + strand, within MPMX26_03061at 3185.910 kb on + strand, within MPMX26_03061at 3186.006 kb on + strandat 3186.020 kb on + strandat 3186.036 kb on + strandat 3186.092 kb on - strandat 3186.116 kb on - strandat 3186.239 kb on + strandat 3186.270 kb on + strandat 3186.299 kb on + strandat 3186.309 kb on + strandat 3186.309 kb on + strandat 3186.324 kb on + strand, within MPMX26_03062at 3186.383 kb on + strand, within MPMX26_03062at 3186.386 kb on - strand, within MPMX26_03062at 3186.388 kb on + strand, within MPMX26_03062at 3186.429 kb on - strand, within MPMX26_03062at 3186.567 kb on + strand, within MPMX26_03062at 3186.649 kb on + strand, within MPMX26_03062at 3186.657 kb on + strand, within MPMX26_03062at 3186.678 kb on + strand, within MPMX26_03062at 3186.678 kb on + strand, within MPMX26_03062at 3186.721 kb on + strand, within MPMX26_03062at 3186.721 kb on + strand, within MPMX26_03062at 3186.721 kb on + strand, within MPMX26_03062at 3186.721 kb on + strand, within MPMX26_03062at 3186.721 kb on + strand, within MPMX26_03062at 3186.721 kb on + strand, within MPMX26_03062at 3186.721 kb on + strand, within MPMX26_03062at 3186.721 kb on + strand, within MPMX26_03062at 3186.769 kb on + strand, within MPMX26_03062at 3186.774 kb on + strand, within MPMX26_03062at 3186.792 kb on - strand, within MPMX26_03062at 3186.930 kb on + strand, within MPMX26_03062at 3186.945 kb on + strand, within MPMX26_03062at 3186.945 kb on + strand, within MPMX26_03062at 3186.945 kb on + strand, within MPMX26_03062at 3186.951 kb on + strand, within MPMX26_03062at 3186.992 kb on + strand, within MPMX26_03062at 3187.027 kb on + strand, within MPMX26_03062at 3187.037 kb on + strand, within MPMX26_03062at 3187.037 kb on + strand, within MPMX26_03062at 3187.037 kb on + strand, within MPMX26_03062at 3187.037 kb on + strand, within MPMX26_03062at 3187.047 kb on + strand, within MPMX26_03062at 3187.047 kb on + strand, within MPMX26_03062at 3187.047 kb on + strand, within MPMX26_03062

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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3,184,106 + MPMX26_03059 0.82 +0.8
3,184,111 + MPMX26_03059 0.82 -0.2
3,184,125 + MPMX26_03059 0.83 -0.2
3,184,156 + MPMX26_03059 0.85 -1.7
3,184,156 + MPMX26_03059 0.85 -0.9
3,184,156 + MPMX26_03059 0.85 -1.2
3,184,156 + MPMX26_03059 0.85 +0.9
3,184,156 + MPMX26_03059 0.85 +0.0
3,184,164 + MPMX26_03059 0.86 -1.4
3,184,164 - MPMX26_03059 0.86 +0.3
3,184,165 + MPMX26_03059 0.86 +1.3
3,184,165 + MPMX26_03059 0.86 -0.0
3,184,165 + MPMX26_03059 0.86 -1.4
3,184,175 + MPMX26_03059 0.87 -0.9
3,184,175 + MPMX26_03059 0.87 -0.7
3,184,177 + MPMX26_03059 0.87 -0.4
3,184,185 + MPMX26_03059 0.87 +0.3
3,184,202 + MPMX26_03059 0.88 +0.1
3,184,207 + MPMX26_03059 0.89 +1.1
3,184,207 + MPMX26_03059 0.89 +0.3
3,184,207 + MPMX26_03059 0.89 +0.1
3,184,207 + MPMX26_03059 0.89 +0.3
3,184,207 + MPMX26_03059 0.89 -1.1
3,184,212 + MPMX26_03059 0.89 +2.6
3,184,212 + MPMX26_03059 0.89 +1.1
3,184,248 + -1.4
3,184,322 + +0.6
3,184,337 + -0.2
3,184,362 + -0.2
3,184,362 + -1.1
3,184,367 + +1.9
3,184,370 - +0.3
3,184,389 + +0.1
3,184,391 + +0.4
3,184,418 - +0.2
3,184,420 + -0.2
3,184,474 - MPMX26_03060 0.14 +0.1
3,184,476 - MPMX26_03060 0.15 +0.4
3,184,493 - MPMX26_03060 0.21 -0.7
3,184,498 - MPMX26_03060 0.22 -0.8
3,184,503 - MPMX26_03060 0.24 +0.2
3,184,513 - MPMX26_03060 0.28 -1.5
3,184,515 + MPMX26_03060 0.28 +0.3
3,184,549 - MPMX26_03060 0.40 +1.9
3,184,549 - MPMX26_03060 0.40 -0.5
3,184,551 - MPMX26_03060 0.41 -0.5
3,184,551 - MPMX26_03060 0.41 +0.1
3,184,582 - MPMX26_03060 0.52 +0.4
3,184,586 - MPMX26_03060 0.54 -1.6
3,184,586 - MPMX26_03060 0.54 +0.2
3,184,602 - MPMX26_03060 0.59 +0.5
3,184,602 - MPMX26_03060 0.59 +0.3
3,184,602 - MPMX26_03060 0.59 +0.6
3,184,674 + MPMX26_03060 0.85 +1.1
3,184,726 - -1.2
3,184,726 - +0.1
3,184,735 - +0.1
3,184,828 + +0.4
3,184,828 + -0.0
3,184,828 + -0.2
3,184,838 + -0.1
3,184,857 + -0.4
3,184,884 + -0.2
3,184,886 + -0.1
3,184,887 + -0.3
3,184,896 + +0.1
3,184,896 + -0.5
3,184,896 + -1.7
3,184,896 + +0.2
3,184,896 + +0.0
3,184,896 + -1.4
3,184,896 + +0.6
3,184,896 + -0.1
3,184,901 + -0.3
3,184,925 + -0.9
3,184,991 + +1.1
3,184,991 + -0.2
3,184,991 + -1.4
3,184,991 + -0.3
3,184,991 + +0.4
3,184,998 + -0.4
3,184,998 + -0.8
3,185,002 + -0.0
3,185,007 + +0.7
3,185,007 + +0.1
3,185,007 + -0.8
3,185,007 + +1.3
3,185,014 + +0.4
3,185,058 + +0.0
3,185,087 + +0.6
3,185,118 + +1.4
3,185,123 + +0.6
3,185,191 + +0.2
3,185,197 + -0.9
3,185,197 + +0.1
3,185,197 + +1.2
3,185,197 + +0.2
3,185,235 + MPMX26_03061 0.14 +1.6
3,185,244 + MPMX26_03061 0.15 +1.8
3,185,280 + MPMX26_03061 0.19 -0.2
3,185,291 + MPMX26_03061 0.20 -1.7
3,185,299 - MPMX26_03061 0.21 +2.6
3,185,389 - MPMX26_03061 0.30 +0.6
3,185,426 + MPMX26_03061 0.34 -0.8
3,185,446 + MPMX26_03061 0.36 +1.6
3,185,447 - MPMX26_03061 0.36 +1.1
3,185,510 + MPMX26_03061 0.43 -0.4
3,185,510 + MPMX26_03061 0.43 +0.2
3,185,510 + MPMX26_03061 0.43 +1.1
3,185,510 + MPMX26_03061 0.43 +0.5
3,185,510 + MPMX26_03061 0.43 +0.2
3,185,510 + MPMX26_03061 0.43 -0.2
3,185,510 + MPMX26_03061 0.43 -1.5
3,185,554 + MPMX26_03061 0.47 +0.5
3,185,601 + MPMX26_03061 0.52 +3.6
3,185,659 + MPMX26_03061 0.58 -1.6
3,185,698 + MPMX26_03061 0.62 -1.3
3,185,708 + MPMX26_03061 0.63 -0.2
3,185,718 + MPMX26_03061 0.64 +0.3
3,185,728 - MPMX26_03061 0.65 +1.1
3,185,789 + MPMX26_03061 0.72 -0.1
3,185,793 + MPMX26_03061 0.72 +0.1
3,185,793 + MPMX26_03061 0.72 +1.1
3,185,795 + MPMX26_03061 0.72 +0.3
3,185,817 + MPMX26_03061 0.75 -0.4
3,185,849 + MPMX26_03061 0.78 -1.2
3,185,887 + MPMX26_03061 0.82 +0.4
3,185,910 + MPMX26_03061 0.84 +0.3
3,186,006 + -0.7
3,186,020 + -0.1
3,186,036 + -0.2
3,186,092 - -0.4
3,186,116 - -0.3
3,186,239 + +0.6
3,186,270 + -1.8
3,186,299 + +0.6
3,186,309 + +0.4
3,186,309 + -2.0
3,186,324 + MPMX26_03062 0.11 +0.7
3,186,383 + MPMX26_03062 0.15 +0.8
3,186,386 - MPMX26_03062 0.15 +1.6
3,186,388 + MPMX26_03062 0.16 +2.1
3,186,429 - MPMX26_03062 0.19 +1.9
3,186,567 + MPMX26_03062 0.29 +0.1
3,186,649 + MPMX26_03062 0.35 +1.2
3,186,657 + MPMX26_03062 0.36 +0.5
3,186,678 + MPMX26_03062 0.37 -0.7
3,186,678 + MPMX26_03062 0.37 -0.1
3,186,721 + MPMX26_03062 0.41 +0.1
3,186,721 + MPMX26_03062 0.41 -0.7
3,186,721 + MPMX26_03062 0.41 -0.2
3,186,721 + MPMX26_03062 0.41 +1.6
3,186,721 + MPMX26_03062 0.41 -0.5
3,186,721 + MPMX26_03062 0.41 +1.1
3,186,721 + MPMX26_03062 0.41 +1.1
3,186,721 + MPMX26_03062 0.41 +1.6
3,186,769 + MPMX26_03062 0.44 +0.1
3,186,774 + MPMX26_03062 0.45 +0.3
3,186,792 - MPMX26_03062 0.46 +1.4
3,186,930 + MPMX26_03062 0.56 +0.1
3,186,945 + MPMX26_03062 0.58 -1.4
3,186,945 + MPMX26_03062 0.58 +0.5
3,186,945 + MPMX26_03062 0.58 +0.3
3,186,951 + MPMX26_03062 0.58 +0.1
3,186,992 + MPMX26_03062 0.61 -0.9
3,187,027 + MPMX26_03062 0.64 -1.4
3,187,037 + MPMX26_03062 0.65 +0.3
3,187,037 + MPMX26_03062 0.65 -0.4
3,187,037 + MPMX26_03062 0.65 +0.5
3,187,037 + MPMX26_03062 0.65 +0.6
3,187,047 + MPMX26_03062 0.65 -0.5
3,187,047 + MPMX26_03062 0.65 +0.2
3,187,047 + MPMX26_03062 0.65 +0.9

Or see this region's nucleotide sequence