Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02970

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02969 and MPMX26_02970 are separated by 282 nucleotidesMPMX26_02970 and MPMX26_02971 are separated by 11 nucleotidesMPMX26_02971 and MPMX26_02972 are separated by 3 nucleotidesMPMX26_02972 and MPMX26_02973 are separated by 12 nucleotides MPMX26_02969: MPMX26_02969 - hypothetical protein, at 3,084,696 to 3,085,961 _02969 MPMX26_02970: MPMX26_02970 - Riboflavin biosynthesis protein RibBA, at 3,086,244 to 3,087,365 _02970 MPMX26_02971: MPMX26_02971 - 6,7-dimethyl-8-ribityllumazine synthase, at 3,087,377 to 3,087,847 _02971 MPMX26_02972: MPMX26_02972 - Transcription antitermination protein NusB, at 3,087,851 to 3,088,300 _02972 MPMX26_02973: MPMX26_02973 - Thiamine-monophosphate kinase, at 3,088,313 to 3,089,230 _02973 Position (kb) 3086 3087 3088Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3085.931 kb on + strandat 3085.945 kb on + strandat 3085.945 kb on + strandat 3085.963 kb on - strandat 3085.973 kb on + strandat 3085.973 kb on + strandat 3085.978 kb on + strandat 3085.981 kb on - strandat 3085.985 kb on + strandat 3085.985 kb on + strandat 3085.986 kb on - strandat 3085.988 kb on + strandat 3085.988 kb on + strandat 3085.988 kb on + strandat 3085.988 kb on + strandat 3085.988 kb on + strandat 3085.988 kb on + strandat 3085.988 kb on + strandat 3085.988 kb on + strandat 3085.988 kb on + strandat 3085.988 kb on + strandat 3085.996 kb on - strandat 3085.996 kb on - strandat 3086.015 kb on + strandat 3086.023 kb on - strandat 3086.062 kb on + strandat 3086.111 kb on + strandat 3086.111 kb on + strandat 3086.111 kb on + strandat 3086.119 kb on - strandat 3086.121 kb on + strandat 3086.121 kb on + strandat 3086.121 kb on + strandat 3086.123 kb on + strandat 3086.123 kb on + strandat 3086.123 kb on + strandat 3086.123 kb on + strandat 3086.123 kb on + strandat 3086.123 kb on + strandat 3086.123 kb on + strandat 3086.129 kb on - strandat 3086.129 kb on - strandat 3086.129 kb on - strandat 3086.129 kb on - strandat 3086.129 kb on - strandat 3086.131 kb on - strandat 3086.150 kb on + strandat 3086.161 kb on + strandat 3086.214 kb on + strandat 3086.233 kb on + strandat 3086.233 kb on + strandat 3086.233 kb on + strandat 3086.233 kb on + strandat 3086.233 kb on + strandat 3086.233 kb on + strandat 3086.249 kb on + strandat 3086.249 kb on + strandat 3086.257 kb on + strandat 3086.257 kb on + strandat 3086.257 kb on + strandat 3086.257 kb on + strandat 3086.274 kb on + strandat 3086.343 kb on + strandat 3086.360 kb on + strand, within MPMX26_02970at 3086.417 kb on + strand, within MPMX26_02970at 3086.434 kb on + strand, within MPMX26_02970at 3086.468 kb on + strand, within MPMX26_02970at 3086.468 kb on + strand, within MPMX26_02970at 3086.478 kb on + strand, within MPMX26_02970at 3086.478 kb on + strand, within MPMX26_02970at 3086.478 kb on + strand, within MPMX26_02970at 3086.478 kb on + strand, within MPMX26_02970at 3086.478 kb on + strand, within MPMX26_02970at 3086.483 kb on + strand, within MPMX26_02970at 3086.488 kb on + strand, within MPMX26_02970at 3086.494 kb on + strand, within MPMX26_02970at 3086.504 kb on + strand, within MPMX26_02970at 3086.504 kb on + strand, within MPMX26_02970at 3086.522 kb on + strand, within MPMX26_02970at 3086.522 kb on + strand, within MPMX26_02970at 3086.522 kb on + strand, within MPMX26_02970at 3086.522 kb on + strand, within MPMX26_02970at 3086.522 kb on + strand, within MPMX26_02970at 3086.522 kb on + strand, within MPMX26_02970at 3086.522 kb on + strand, within MPMX26_02970at 3086.522 kb on + strand, within MPMX26_02970at 3086.525 kb on + strand, within MPMX26_02970at 3086.550 kb on + strand, within MPMX26_02970at 3086.559 kb on + strand, within MPMX26_02970at 3086.564 kb on + strand, within MPMX26_02970at 3086.574 kb on + strand, within MPMX26_02970at 3086.588 kb on + strand, within MPMX26_02970at 3086.588 kb on + strand, within MPMX26_02970at 3086.597 kb on + strand, within MPMX26_02970at 3086.642 kb on + strand, within MPMX26_02970at 3086.642 kb on + strand, within MPMX26_02970at 3086.652 kb on + strand, within MPMX26_02970at 3086.652 kb on + strand, within MPMX26_02970at 3086.652 kb on + strand, within MPMX26_02970at 3086.652 kb on + strand, within MPMX26_02970at 3086.652 kb on + strand, within MPMX26_02970at 3086.652 kb on + strand, within MPMX26_02970at 3086.662 kb on + strand, within MPMX26_02970at 3086.662 kb on + strand, within MPMX26_02970at 3086.672 kb on + strand, within MPMX26_02970at 3086.672 kb on + strand, within MPMX26_02970at 3086.682 kb on + strand, within MPMX26_02970at 3086.693 kb on + strand, within MPMX26_02970at 3086.693 kb on + strand, within MPMX26_02970at 3086.752 kb on + strand, within MPMX26_02970at 3086.752 kb on + strand, within MPMX26_02970at 3086.752 kb on + strand, within MPMX26_02970at 3086.752 kb on + strand, within MPMX26_02970at 3086.767 kb on + strand, within MPMX26_02970at 3086.818 kb on + strand, within MPMX26_02970at 3086.838 kb on + strand, within MPMX26_02970at 3086.845 kb on + strand, within MPMX26_02970at 3086.845 kb on + strand, within MPMX26_02970at 3086.845 kb on + strand, within MPMX26_02970at 3086.845 kb on + strand, within MPMX26_02970at 3086.845 kb on + strand, within MPMX26_02970at 3086.850 kb on + strand, within MPMX26_02970at 3086.866 kb on + strand, within MPMX26_02970at 3086.871 kb on + strand, within MPMX26_02970at 3086.887 kb on + strand, within MPMX26_02970at 3086.894 kb on + strand, within MPMX26_02970at 3086.894 kb on + strand, within MPMX26_02970at 3086.902 kb on + strand, within MPMX26_02970at 3086.957 kb on + strand, within MPMX26_02970at 3086.957 kb on + strand, within MPMX26_02970at 3086.957 kb on + strand, within MPMX26_02970at 3086.957 kb on + strand, within MPMX26_02970at 3086.957 kb on + strand, within MPMX26_02970at 3086.957 kb on + strand, within MPMX26_02970at 3086.957 kb on + strand, within MPMX26_02970at 3086.969 kb on + strand, within MPMX26_02970at 3086.981 kb on + strand, within MPMX26_02970at 3086.999 kb on + strand, within MPMX26_02970at 3087.103 kb on + strand, within MPMX26_02970at 3087.106 kb on + strand, within MPMX26_02970at 3087.106 kb on + strand, within MPMX26_02970at 3087.108 kb on + strand, within MPMX26_02970at 3087.108 kb on + strand, within MPMX26_02970at 3087.108 kb on + strand, within MPMX26_02970at 3087.108 kb on + strand, within MPMX26_02970at 3087.108 kb on + strand, within MPMX26_02970at 3087.108 kb on + strand, within MPMX26_02970at 3087.108 kb on + strand, within MPMX26_02970at 3087.113 kb on + strand, within MPMX26_02970at 3087.113 kb on + strand, within MPMX26_02970at 3087.113 kb on + strand, within MPMX26_02970at 3087.113 kb on + strand, within MPMX26_02970at 3087.113 kb on + strand, within MPMX26_02970at 3087.113 kb on + strand, within MPMX26_02970at 3087.113 kb on + strand, within MPMX26_02970at 3087.113 kb on + strand, within MPMX26_02970at 3087.118 kb on + strand, within MPMX26_02970at 3087.118 kb on + strand, within MPMX26_02970at 3087.118 kb on + strand, within MPMX26_02970at 3087.118 kb on + strand, within MPMX26_02970at 3087.118 kb on + strand, within MPMX26_02970at 3087.141 kb on + strand, within MPMX26_02970at 3087.141 kb on + strand, within MPMX26_02970at 3087.143 kb on + strand, within MPMX26_02970at 3087.151 kb on - strand, within MPMX26_02970at 3087.162 kb on + strand, within MPMX26_02970at 3087.163 kb on + strand, within MPMX26_02970at 3087.172 kb on + strand, within MPMX26_02970at 3087.172 kb on + strand, within MPMX26_02970at 3087.172 kb on + strand, within MPMX26_02970at 3087.172 kb on + strand, within MPMX26_02970at 3087.172 kb on + strand, within MPMX26_02970at 3087.172 kb on + strand, within MPMX26_02970at 3087.172 kb on + strand, within MPMX26_02970at 3087.172 kb on + strand, within MPMX26_02970at 3087.172 kb on + strand, within MPMX26_02970at 3087.172 kb on + strand, within MPMX26_02970at 3087.172 kb on + strand, within MPMX26_02970at 3087.172 kb on + strand, within MPMX26_02970at 3087.172 kb on + strand, within MPMX26_02970at 3087.172 kb on + strand, within MPMX26_02970at 3087.212 kb on + strand, within MPMX26_02970at 3087.212 kb on + strand, within MPMX26_02970at 3087.212 kb on + strand, within MPMX26_02970at 3087.220 kb on + strand, within MPMX26_02970at 3087.220 kb on + strand, within MPMX26_02970at 3087.250 kb on + strand, within MPMX26_02970at 3087.285 kb on + strandat 3087.295 kb on + strandat 3087.295 kb on + strandat 3087.305 kb on + strandat 3087.329 kb on + strandat 3088.295 kb on + strandat 3088.303 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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3,085,931 + +0.1
3,085,945 + -2.2
3,085,945 + -0.4
3,085,963 - -0.8
3,085,973 + -0.7
3,085,973 + -0.6
3,085,978 + +1.1
3,085,981 - +0.5
3,085,985 + +0.1
3,085,985 + -0.2
3,085,986 - +1.1
3,085,988 + +0.1
3,085,988 + -1.1
3,085,988 + +0.0
3,085,988 + +0.2
3,085,988 + -0.1
3,085,988 + -0.5
3,085,988 + -1.1
3,085,988 + +1.0
3,085,988 + +1.2
3,085,988 + -0.9
3,085,996 - +0.3
3,085,996 - +0.8
3,086,015 + -0.4
3,086,023 - +0.6
3,086,062 + -0.2
3,086,111 + -0.2
3,086,111 + -1.2
3,086,111 + -0.2
3,086,119 - -0.4
3,086,121 + +1.1
3,086,121 + +0.1
3,086,121 + -0.6
3,086,123 + -0.1
3,086,123 + +1.0
3,086,123 + +0.2
3,086,123 + +0.1
3,086,123 + -0.2
3,086,123 + +0.4
3,086,123 + -0.3
3,086,129 - -1.7
3,086,129 - -1.1
3,086,129 - -0.5
3,086,129 - +2.6
3,086,129 - +1.6
3,086,131 - -0.5
3,086,150 + +0.4
3,086,161 + -0.5
3,086,214 + -0.4
3,086,233 + -1.7
3,086,233 + -1.9
3,086,233 + -2.1
3,086,233 + +0.3
3,086,233 + -2.2
3,086,233 + -1.6
3,086,249 + -0.8
3,086,249 + -0.6
3,086,257 + -1.1
3,086,257 + +1.1
3,086,257 + -1.7
3,086,257 + -0.7
3,086,274 + -0.7
3,086,343 + -0.4
3,086,360 + MPMX26_02970 0.10 -0.9
3,086,417 + MPMX26_02970 0.15 -0.5
3,086,434 + MPMX26_02970 0.17 -1.3
3,086,468 + MPMX26_02970 0.20 +0.1
3,086,468 + MPMX26_02970 0.20 -0.5
3,086,478 + MPMX26_02970 0.21 -2.2
3,086,478 + MPMX26_02970 0.21 -1.6
3,086,478 + MPMX26_02970 0.21 -1.4
3,086,478 + MPMX26_02970 0.21 -0.8
3,086,478 + MPMX26_02970 0.21 -1.7
3,086,483 + MPMX26_02970 0.21 -0.6
3,086,488 + MPMX26_02970 0.22 +1.2
3,086,494 + MPMX26_02970 0.22 +0.9
3,086,504 + MPMX26_02970 0.23 -0.9
3,086,504 + MPMX26_02970 0.23 -1.6
3,086,522 + MPMX26_02970 0.25 -1.9
3,086,522 + MPMX26_02970 0.25 -0.2
3,086,522 + MPMX26_02970 0.25 -1.6
3,086,522 + MPMX26_02970 0.25 -1.4
3,086,522 + MPMX26_02970 0.25 -0.4
3,086,522 + MPMX26_02970 0.25 -1.0
3,086,522 + MPMX26_02970 0.25 -2.2
3,086,522 + MPMX26_02970 0.25 +0.2
3,086,525 + MPMX26_02970 0.25 -1.0
3,086,550 + MPMX26_02970 0.27 -1.6
3,086,559 + MPMX26_02970 0.28 -0.7
3,086,564 + MPMX26_02970 0.29 -1.7
3,086,574 + MPMX26_02970 0.29 -0.3
3,086,588 + MPMX26_02970 0.31 -0.4
3,086,588 + MPMX26_02970 0.31 -1.0
3,086,597 + MPMX26_02970 0.31 -0.8
3,086,642 + MPMX26_02970 0.35 -0.8
3,086,642 + MPMX26_02970 0.35 +0.0
3,086,652 + MPMX26_02970 0.36 -0.7
3,086,652 + MPMX26_02970 0.36 -0.1
3,086,652 + MPMX26_02970 0.36 -1.8
3,086,652 + MPMX26_02970 0.36 -0.4
3,086,652 + MPMX26_02970 0.36 +0.3
3,086,652 + MPMX26_02970 0.36 -1.1
3,086,662 + MPMX26_02970 0.37 -1.6
3,086,662 + MPMX26_02970 0.37 -1.3
3,086,672 + MPMX26_02970 0.38 +0.5
3,086,672 + MPMX26_02970 0.38 -2.8
3,086,682 + MPMX26_02970 0.39 -1.8
3,086,693 + MPMX26_02970 0.40 -1.4
3,086,693 + MPMX26_02970 0.40 -0.4
3,086,752 + MPMX26_02970 0.45 -0.7
3,086,752 + MPMX26_02970 0.45 -0.9
3,086,752 + MPMX26_02970 0.45 +0.3
3,086,752 + MPMX26_02970 0.45 -0.8
3,086,767 + MPMX26_02970 0.47 -2.1
3,086,818 + MPMX26_02970 0.51 -2.4
3,086,838 + MPMX26_02970 0.53 -1.4
3,086,845 + MPMX26_02970 0.54 -3.1
3,086,845 + MPMX26_02970 0.54 -1.3
3,086,845 + MPMX26_02970 0.54 -0.3
3,086,845 + MPMX26_02970 0.54 -1.9
3,086,845 + MPMX26_02970 0.54 -0.5
3,086,850 + MPMX26_02970 0.54 -0.0
3,086,866 + MPMX26_02970 0.55 -2.2
3,086,871 + MPMX26_02970 0.56 -0.7
3,086,887 + MPMX26_02970 0.57 -1.7
3,086,894 + MPMX26_02970 0.58 -1.9
3,086,894 + MPMX26_02970 0.58 +0.6
3,086,902 + MPMX26_02970 0.59 -2.9
3,086,957 + MPMX26_02970 0.64 -0.4
3,086,957 + MPMX26_02970 0.64 -0.5
3,086,957 + MPMX26_02970 0.64 -0.6
3,086,957 + MPMX26_02970 0.64 +0.0
3,086,957 + MPMX26_02970 0.64 -0.5
3,086,957 + MPMX26_02970 0.64 -0.1
3,086,957 + MPMX26_02970 0.64 +0.0
3,086,969 + MPMX26_02970 0.65 -1.1
3,086,981 + MPMX26_02970 0.66 -1.5
3,086,999 + MPMX26_02970 0.67 -0.9
3,087,103 + MPMX26_02970 0.77 -1.5
3,087,106 + MPMX26_02970 0.77 -2.7
3,087,106 + MPMX26_02970 0.77 -0.8
3,087,108 + MPMX26_02970 0.77 -0.5
3,087,108 + MPMX26_02970 0.77 -0.2
3,087,108 + MPMX26_02970 0.77 -0.7
3,087,108 + MPMX26_02970 0.77 -0.3
3,087,108 + MPMX26_02970 0.77 +0.4
3,087,108 + MPMX26_02970 0.77 +0.2
3,087,108 + MPMX26_02970 0.77 -1.2
3,087,113 + MPMX26_02970 0.77 -1.1
3,087,113 + MPMX26_02970 0.77 -0.3
3,087,113 + MPMX26_02970 0.77 +0.6
3,087,113 + MPMX26_02970 0.77 -0.4
3,087,113 + MPMX26_02970 0.77 +0.4
3,087,113 + MPMX26_02970 0.77 -0.2
3,087,113 + MPMX26_02970 0.77 -0.4
3,087,113 + MPMX26_02970 0.77 -0.5
3,087,118 + MPMX26_02970 0.78 -1.4
3,087,118 + MPMX26_02970 0.78 -1.7
3,087,118 + MPMX26_02970 0.78 -0.4
3,087,118 + MPMX26_02970 0.78 -2.1
3,087,118 + MPMX26_02970 0.78 -1.1
3,087,141 + MPMX26_02970 0.80 -0.1
3,087,141 + MPMX26_02970 0.80 -0.6
3,087,143 + MPMX26_02970 0.80 -0.4
3,087,151 - MPMX26_02970 0.81 +0.8
3,087,162 + MPMX26_02970 0.82 -0.1
3,087,163 + MPMX26_02970 0.82 -1.3
3,087,172 + MPMX26_02970 0.83 -2.9
3,087,172 + MPMX26_02970 0.83 -2.4
3,087,172 + MPMX26_02970 0.83 -0.8
3,087,172 + MPMX26_02970 0.83 -2.3
3,087,172 + MPMX26_02970 0.83 -1.9
3,087,172 + MPMX26_02970 0.83 -1.5
3,087,172 + MPMX26_02970 0.83 -1.1
3,087,172 + MPMX26_02970 0.83 -1.5
3,087,172 + MPMX26_02970 0.83 -2.7
3,087,172 + MPMX26_02970 0.83 -1.2
3,087,172 + MPMX26_02970 0.83 -1.2
3,087,172 + MPMX26_02970 0.83 +0.1
3,087,172 + MPMX26_02970 0.83 -1.8
3,087,172 + MPMX26_02970 0.83 -0.1
3,087,212 + MPMX26_02970 0.86 -0.3
3,087,212 + MPMX26_02970 0.86 -0.4
3,087,212 + MPMX26_02970 0.86 +0.3
3,087,220 + MPMX26_02970 0.87 -0.4
3,087,220 + MPMX26_02970 0.87 -0.2
3,087,250 + MPMX26_02970 0.90 -2.4
3,087,285 + -0.3
3,087,295 + -1.5
3,087,295 + -2.2
3,087,305 + -1.6
3,087,329 + -0.7
3,088,295 + -0.2
3,088,303 + +1.6

Or see this region's nucleotide sequence