Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02470

Experiment: no stress control

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02468 and MPMX26_02469 are separated by 144 nucleotidesMPMX26_02469 and MPMX26_02470 are separated by 43 nucleotidesMPMX26_02470 and MPMX26_02471 are separated by 216 nucleotides MPMX26_02468: MPMX26_02468 - Signal recognition particle protein, at 2,553,746 to 2,555,161 _02468 MPMX26_02469: MPMX26_02469 - Inner membrane protein YpjD, at 2,555,306 to 2,556,115 _02469 MPMX26_02470: MPMX26_02470 - hypothetical protein, at 2,556,159 to 2,556,926 _02470 MPMX26_02471: MPMX26_02471 - tRNA-dihydrouridine(16) synthase, at 2,557,143 to 2,558,084 _02471 Position (kb) 2556 2557Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2555.348 kb on + strandat 2555.421 kb on + strand, within MPMX26_02469at 2555.421 kb on + strand, within MPMX26_02469at 2555.426 kb on + strand, within MPMX26_02469at 2555.426 kb on + strand, within MPMX26_02469at 2555.426 kb on + strand, within MPMX26_02469at 2555.454 kb on + strand, within MPMX26_02469at 2555.459 kb on + strand, within MPMX26_02469at 2555.459 kb on + strand, within MPMX26_02469at 2555.459 kb on + strand, within MPMX26_02469at 2555.459 kb on + strand, within MPMX26_02469at 2555.459 kb on + strand, within MPMX26_02469at 2555.459 kb on + strand, within MPMX26_02469at 2555.459 kb on + strand, within MPMX26_02469at 2555.459 kb on + strand, within MPMX26_02469at 2555.459 kb on + strand, within MPMX26_02469at 2555.459 kb on + strand, within MPMX26_02469at 2555.469 kb on + strand, within MPMX26_02469at 2555.476 kb on + strand, within MPMX26_02469at 2555.476 kb on + strand, within MPMX26_02469at 2555.476 kb on + strand, within MPMX26_02469at 2555.476 kb on + strand, within MPMX26_02469at 2555.526 kb on + strand, within MPMX26_02469at 2555.526 kb on + strand, within MPMX26_02469at 2555.526 kb on + strand, within MPMX26_02469at 2555.526 kb on + strand, within MPMX26_02469at 2555.526 kb on + strand, within MPMX26_02469at 2555.526 kb on + strand, within MPMX26_02469at 2555.526 kb on + strand, within MPMX26_02469at 2555.557 kb on + strand, within MPMX26_02469at 2555.576 kb on + strand, within MPMX26_02469at 2555.576 kb on + strand, within MPMX26_02469at 2555.576 kb on + strand, within MPMX26_02469at 2555.623 kb on + strand, within MPMX26_02469at 2555.646 kb on + strand, within MPMX26_02469at 2555.646 kb on + strand, within MPMX26_02469at 2555.671 kb on + strand, within MPMX26_02469at 2555.671 kb on + strand, within MPMX26_02469at 2555.684 kb on + strand, within MPMX26_02469at 2555.684 kb on + strand, within MPMX26_02469at 2555.711 kb on + strand, within MPMX26_02469at 2555.720 kb on + strand, within MPMX26_02469at 2555.720 kb on + strand, within MPMX26_02469at 2555.720 kb on + strand, within MPMX26_02469at 2555.720 kb on + strand, within MPMX26_02469at 2555.720 kb on + strand, within MPMX26_02469at 2555.747 kb on + strand, within MPMX26_02469at 2555.747 kb on + strand, within MPMX26_02469at 2555.747 kb on + strand, within MPMX26_02469at 2555.747 kb on + strand, within MPMX26_02469at 2555.747 kb on + strand, within MPMX26_02469at 2555.747 kb on + strand, within MPMX26_02469at 2555.774 kb on + strand, within MPMX26_02469at 2555.822 kb on + strand, within MPMX26_02469at 2555.844 kb on + strand, within MPMX26_02469at 2555.854 kb on + strand, within MPMX26_02469at 2555.909 kb on + strand, within MPMX26_02469at 2555.909 kb on + strand, within MPMX26_02469at 2555.929 kb on + strand, within MPMX26_02469at 2555.948 kb on + strand, within MPMX26_02469at 2555.953 kb on + strand, within MPMX26_02469at 2556.224 kb on + strandat 2556.224 kb on + strandat 2556.694 kb on + strand, within MPMX26_02470at 2556.713 kb on + strand, within MPMX26_02470at 2556.713 kb on + strand, within MPMX26_02470at 2556.718 kb on + strand, within MPMX26_02470at 2556.718 kb on + strand, within MPMX26_02470at 2556.718 kb on + strand, within MPMX26_02470at 2556.718 kb on + strand, within MPMX26_02470at 2556.718 kb on + strand, within MPMX26_02470at 2556.718 kb on + strand, within MPMX26_02470at 2556.718 kb on + strand, within MPMX26_02470at 2556.718 kb on + strand, within MPMX26_02470at 2556.718 kb on + strand, within MPMX26_02470at 2556.718 kb on + strand, within MPMX26_02470at 2556.718 kb on + strand, within MPMX26_02470at 2557.164 kb on + strandat 2557.170 kb on + strandat 2557.179 kb on + strandat 2557.197 kb on + strandat 2557.206 kb on + strandat 2557.206 kb on + strandat 2557.206 kb on + strandat 2557.206 kb on + strandat 2557.209 kb on + strandat 2557.216 kb on + strandat 2557.216 kb on + strandat 2557.226 kb on + strandat 2557.226 kb on + strandat 2557.226 kb on + strandat 2557.260 kb on + strand, within MPMX26_02471at 2557.260 kb on + strand, within MPMX26_02471at 2557.260 kb on + strand, within MPMX26_02471at 2557.270 kb on + strand, within MPMX26_02471at 2557.275 kb on + strand, within MPMX26_02471at 2557.310 kb on + strand, within MPMX26_02471at 2557.330 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.395 kb on + strand, within MPMX26_02471at 2557.395 kb on + strand, within MPMX26_02471at 2557.395 kb on + strand, within MPMX26_02471at 2557.395 kb on + strand, within MPMX26_02471at 2557.395 kb on + strand, within MPMX26_02471at 2557.395 kb on + strand, within MPMX26_02471at 2557.395 kb on + strand, within MPMX26_02471at 2557.398 kb on + strand, within MPMX26_02471at 2557.398 kb on + strand, within MPMX26_02471at 2557.398 kb on + strand, within MPMX26_02471at 2557.398 kb on + strand, within MPMX26_02471at 2557.463 kb on + strand, within MPMX26_02471at 2557.468 kb on + strand, within MPMX26_02471at 2557.468 kb on + strand, within MPMX26_02471at 2557.468 kb on + strand, within MPMX26_02471at 2557.476 kb on + strand, within MPMX26_02471at 2557.481 kb on + strand, within MPMX26_02471at 2557.486 kb on + strand, within MPMX26_02471at 2557.486 kb on + strand, within MPMX26_02471at 2557.486 kb on + strand, within MPMX26_02471at 2557.497 kb on + strand, within MPMX26_02471at 2557.497 kb on + strand, within MPMX26_02471at 2557.508 kb on + strand, within MPMX26_02471at 2557.508 kb on + strand, within MPMX26_02471at 2557.508 kb on + strand, within MPMX26_02471at 2557.518 kb on + strand, within MPMX26_02471at 2557.540 kb on + strand, within MPMX26_02471at 2557.600 kb on + strand, within MPMX26_02471at 2557.617 kb on + strand, within MPMX26_02471at 2557.623 kb on + strand, within MPMX26_02471at 2557.633 kb on + strand, within MPMX26_02471at 2557.641 kb on + strand, within MPMX26_02471at 2557.641 kb on + strand, within MPMX26_02471at 2557.641 kb on + strand, within MPMX26_02471at 2557.641 kb on + strand, within MPMX26_02471at 2557.641 kb on + strand, within MPMX26_02471at 2557.641 kb on + strand, within MPMX26_02471at 2557.652 kb on + strand, within MPMX26_02471at 2557.652 kb on + strand, within MPMX26_02471at 2557.664 kb on + strand, within MPMX26_02471at 2557.666 kb on + strand, within MPMX26_02471at 2557.666 kb on + strand, within MPMX26_02471at 2557.666 kb on + strand, within MPMX26_02471at 2557.666 kb on + strand, within MPMX26_02471at 2557.666 kb on + strand, within MPMX26_02471at 2557.694 kb on + strand, within MPMX26_02471at 2557.713 kb on + strand, within MPMX26_02471at 2557.751 kb on + strand, within MPMX26_02471at 2557.756 kb on + strand, within MPMX26_02471at 2557.767 kb on + strand, within MPMX26_02471at 2557.797 kb on + strand, within MPMX26_02471at 2557.812 kb on + strand, within MPMX26_02471at 2557.828 kb on + strand, within MPMX26_02471at 2557.828 kb on + strand, within MPMX26_02471at 2557.833 kb on + strand, within MPMX26_02471at 2557.833 kb on + strand, within MPMX26_02471at 2557.833 kb on + strand, within MPMX26_02471at 2557.853 kb on + strand, within MPMX26_02471at 2557.869 kb on + strand, within MPMX26_02471at 2557.869 kb on + strand, within MPMX26_02471at 2557.882 kb on + strand, within MPMX26_02471at 2557.890 kb on + strand, within MPMX26_02471at 2557.890 kb on + strand, within MPMX26_02471

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
remove
2,555,348 + -0.8
2,555,421 + MPMX26_02469 0.14 -0.1
2,555,421 + MPMX26_02469 0.14 -0.1
2,555,426 + MPMX26_02469 0.15 -0.7
2,555,426 + MPMX26_02469 0.15 -0.8
2,555,426 + MPMX26_02469 0.15 -1.3
2,555,454 + MPMX26_02469 0.18 +0.3
2,555,459 + MPMX26_02469 0.19 +0.4
2,555,459 + MPMX26_02469 0.19 -1.2
2,555,459 + MPMX26_02469 0.19 -1.0
2,555,459 + MPMX26_02469 0.19 -1.8
2,555,459 + MPMX26_02469 0.19 -0.2
2,555,459 + MPMX26_02469 0.19 -2.2
2,555,459 + MPMX26_02469 0.19 -0.9
2,555,459 + MPMX26_02469 0.19 -2.0
2,555,459 + MPMX26_02469 0.19 -3.1
2,555,459 + MPMX26_02469 0.19 -1.2
2,555,469 + MPMX26_02469 0.20 +0.7
2,555,476 + MPMX26_02469 0.21 +0.7
2,555,476 + MPMX26_02469 0.21 +0.7
2,555,476 + MPMX26_02469 0.21 -0.6
2,555,476 + MPMX26_02469 0.21 -0.3
2,555,526 + MPMX26_02469 0.27 -0.7
2,555,526 + MPMX26_02469 0.27 -0.3
2,555,526 + MPMX26_02469 0.27 -2.2
2,555,526 + MPMX26_02469 0.27 -1.1
2,555,526 + MPMX26_02469 0.27 +0.7
2,555,526 + MPMX26_02469 0.27 +1.3
2,555,526 + MPMX26_02469 0.27 -0.2
2,555,557 + MPMX26_02469 0.31 -0.7
2,555,576 + MPMX26_02469 0.33 -0.8
2,555,576 + MPMX26_02469 0.33 -0.7
2,555,576 + MPMX26_02469 0.33 -0.8
2,555,623 + MPMX26_02469 0.39 -0.6
2,555,646 + MPMX26_02469 0.42 +0.3
2,555,646 + MPMX26_02469 0.42 -0.7
2,555,671 + MPMX26_02469 0.45 -3.4
2,555,671 + MPMX26_02469 0.45 -0.1
2,555,684 + MPMX26_02469 0.47 +0.2
2,555,684 + MPMX26_02469 0.47 -1.1
2,555,711 + MPMX26_02469 0.50 -0.7
2,555,720 + MPMX26_02469 0.51 +0.0
2,555,720 + MPMX26_02469 0.51 -0.1
2,555,720 + MPMX26_02469 0.51 -1.9
2,555,720 + MPMX26_02469 0.51 +0.2
2,555,720 + MPMX26_02469 0.51 -0.4
2,555,747 + MPMX26_02469 0.54 +0.3
2,555,747 + MPMX26_02469 0.54 -1.1
2,555,747 + MPMX26_02469 0.54 +0.9
2,555,747 + MPMX26_02469 0.54 -1.6
2,555,747 + MPMX26_02469 0.54 -1.1
2,555,747 + MPMX26_02469 0.54 -1.5
2,555,774 + MPMX26_02469 0.58 +0.0
2,555,822 + MPMX26_02469 0.64 -1.7
2,555,844 + MPMX26_02469 0.66 -0.5
2,555,854 + MPMX26_02469 0.68 -1.0
2,555,909 + MPMX26_02469 0.74 -1.5
2,555,909 + MPMX26_02469 0.74 +0.7
2,555,929 + MPMX26_02469 0.77 -0.3
2,555,948 + MPMX26_02469 0.79 +0.4
2,555,953 + MPMX26_02469 0.80 -0.6
2,556,224 + +1.2
2,556,224 + +0.7
2,556,694 + MPMX26_02470 0.70 +0.1
2,556,713 + MPMX26_02470 0.72 +0.8
2,556,713 + MPMX26_02470 0.72 +0.9
2,556,718 + MPMX26_02470 0.73 +0.7
2,556,718 + MPMX26_02470 0.73 +0.2
2,556,718 + MPMX26_02470 0.73 +0.6
2,556,718 + MPMX26_02470 0.73 +0.4
2,556,718 + MPMX26_02470 0.73 +1.4
2,556,718 + MPMX26_02470 0.73 -0.3
2,556,718 + MPMX26_02470 0.73 -0.6
2,556,718 + MPMX26_02470 0.73 +0.6
2,556,718 + MPMX26_02470 0.73 -1.5
2,556,718 + MPMX26_02470 0.73 +0.7
2,556,718 + MPMX26_02470 0.73 +1.2
2,557,164 + +0.0
2,557,170 + +0.5
2,557,179 + +0.1
2,557,197 + +0.1
2,557,206 + +0.5
2,557,206 + -0.5
2,557,206 + +0.4
2,557,206 + -0.2
2,557,209 + -0.5
2,557,216 + +0.2
2,557,216 + +0.4
2,557,226 + -0.2
2,557,226 + -1.1
2,557,226 + -0.5
2,557,260 + MPMX26_02471 0.12 -0.8
2,557,260 + MPMX26_02471 0.12 +0.4
2,557,260 + MPMX26_02471 0.12 -0.5
2,557,270 + MPMX26_02471 0.13 +0.8
2,557,275 + MPMX26_02471 0.14 -0.7
2,557,310 + MPMX26_02471 0.18 -0.7
2,557,330 + MPMX26_02471 0.20 +0.0
2,557,393 + MPMX26_02471 0.27 -0.6
2,557,393 + MPMX26_02471 0.27 -0.9
2,557,393 + MPMX26_02471 0.27 +0.3
2,557,393 + MPMX26_02471 0.27 -0.3
2,557,393 + MPMX26_02471 0.27 +0.8
2,557,393 + MPMX26_02471 0.27 +1.7
2,557,393 + MPMX26_02471 0.27 -2.0
2,557,393 + MPMX26_02471 0.27 +0.1
2,557,393 + MPMX26_02471 0.27 +0.6
2,557,393 + MPMX26_02471 0.27 +0.3
2,557,393 + MPMX26_02471 0.27 +2.2
2,557,393 + MPMX26_02471 0.27 -0.9
2,557,393 + MPMX26_02471 0.27 +1.2
2,557,393 + MPMX26_02471 0.27 +0.4
2,557,393 + MPMX26_02471 0.27 +0.3
2,557,395 + MPMX26_02471 0.27 -0.2
2,557,395 + MPMX26_02471 0.27 -0.3
2,557,395 + MPMX26_02471 0.27 +0.7
2,557,395 + MPMX26_02471 0.27 -0.1
2,557,395 + MPMX26_02471 0.27 -1.2
2,557,395 + MPMX26_02471 0.27 +0.0
2,557,395 + MPMX26_02471 0.27 -0.8
2,557,398 + MPMX26_02471 0.27 +0.4
2,557,398 + MPMX26_02471 0.27 -0.1
2,557,398 + MPMX26_02471 0.27 +0.6
2,557,398 + MPMX26_02471 0.27 +0.7
2,557,463 + MPMX26_02471 0.34 +1.2
2,557,468 + MPMX26_02471 0.35 +0.2
2,557,468 + MPMX26_02471 0.35 +0.6
2,557,468 + MPMX26_02471 0.35 +0.0
2,557,476 + MPMX26_02471 0.35 +1.3
2,557,481 + MPMX26_02471 0.36 +1.1
2,557,486 + MPMX26_02471 0.36 +1.2
2,557,486 + MPMX26_02471 0.36 -0.9
2,557,486 + MPMX26_02471 0.36 -0.8
2,557,497 + MPMX26_02471 0.38 +0.0
2,557,497 + MPMX26_02471 0.38 -0.8
2,557,508 + MPMX26_02471 0.39 -0.3
2,557,508 + MPMX26_02471 0.39 +1.6
2,557,508 + MPMX26_02471 0.39 -0.6
2,557,518 + MPMX26_02471 0.40 +0.2
2,557,540 + MPMX26_02471 0.42 +0.6
2,557,600 + MPMX26_02471 0.49 +0.5
2,557,617 + MPMX26_02471 0.50 -0.5
2,557,623 + MPMX26_02471 0.51 +0.5
2,557,633 + MPMX26_02471 0.52 +0.5
2,557,641 + MPMX26_02471 0.53 -0.1
2,557,641 + MPMX26_02471 0.53 +0.5
2,557,641 + MPMX26_02471 0.53 -0.7
2,557,641 + MPMX26_02471 0.53 +0.5
2,557,641 + MPMX26_02471 0.53 -0.8
2,557,641 + MPMX26_02471 0.53 -1.0
2,557,652 + MPMX26_02471 0.54 -0.3
2,557,652 + MPMX26_02471 0.54 -0.6
2,557,664 + MPMX26_02471 0.55 -0.9
2,557,666 + MPMX26_02471 0.56 -1.4
2,557,666 + MPMX26_02471 0.56 +0.4
2,557,666 + MPMX26_02471 0.56 -0.0
2,557,666 + MPMX26_02471 0.56 +0.4
2,557,666 + MPMX26_02471 0.56 +0.3
2,557,694 + MPMX26_02471 0.58 +0.2
2,557,713 + MPMX26_02471 0.61 +0.2
2,557,751 + MPMX26_02471 0.65 +0.1
2,557,756 + MPMX26_02471 0.65 -1.0
2,557,767 + MPMX26_02471 0.66 +0.7
2,557,797 + MPMX26_02471 0.69 -1.0
2,557,812 + MPMX26_02471 0.71 -1.5
2,557,828 + MPMX26_02471 0.73 +0.3
2,557,828 + MPMX26_02471 0.73 -0.5
2,557,833 + MPMX26_02471 0.73 -0.6
2,557,833 + MPMX26_02471 0.73 -0.7
2,557,833 + MPMX26_02471 0.73 -0.4
2,557,853 + MPMX26_02471 0.75 +0.4
2,557,869 + MPMX26_02471 0.77 -0.7
2,557,869 + MPMX26_02471 0.77 +0.6
2,557,882 + MPMX26_02471 0.78 -0.7
2,557,890 + MPMX26_02471 0.79 -0.1
2,557,890 + MPMX26_02471 0.79 +0.4

Or see this region's nucleotide sequence