Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02400 and MPMX26_02401 are separated by 18 nucleotides MPMX26_02401 and MPMX26_02402 are separated by 424 nucleotides MPMX26_02402 and MPMX26_02403 overlap by 4 nucleotides
MPMX26_02400: MPMX26_02400 - Epimerase family protein, at 2,483,202 to 2,484,116
_02400
MPMX26_02401: MPMX26_02401 - hypothetical protein, at 2,484,135 to 2,484,590
_02401
MPMX26_02402: MPMX26_02402 - Nuclease SbcCD subunit D, at 2,485,015 to 2,486,304
_02402
MPMX26_02403: MPMX26_02403 - hypothetical protein, at 2,486,301 to 2,489,903
_02403
Position (kb)
2485
2486
2487 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2484.095 kb on - strand at 2484.171 kb on - strand at 2484.171 kb on - strand at 2484.228 kb on - strand, within MPMX26_02401 at 2484.412 kb on - strand, within MPMX26_02401 at 2484.425 kb on - strand, within MPMX26_02401 at 2484.425 kb on - strand, within MPMX26_02401 at 2484.425 kb on - strand, within MPMX26_02401 at 2484.425 kb on - strand, within MPMX26_02401 at 2484.443 kb on - strand, within MPMX26_02401 at 2484.497 kb on - strand, within MPMX26_02401 at 2484.519 kb on - strand, within MPMX26_02401 at 2484.692 kb on + strand at 2484.697 kb on + strand at 2484.700 kb on + strand at 2484.743 kb on + strand at 2484.757 kb on + strand at 2484.757 kb on + strand at 2484.798 kb on + strand at 2484.798 kb on + strand at 2484.798 kb on + strand at 2484.798 kb on + strand at 2485.069 kb on + strand at 2485.117 kb on + strand at 2485.117 kb on + strand at 2485.276 kb on + strand, within MPMX26_02402 at 2485.276 kb on + strand, within MPMX26_02402 at 2485.329 kb on + strand, within MPMX26_02402 at 2485.465 kb on + strand, within MPMX26_02402 at 2485.575 kb on + strand, within MPMX26_02402 at 2485.618 kb on + strand, within MPMX26_02402 at 2485.753 kb on + strand, within MPMX26_02402 at 2485.948 kb on + strand, within MPMX26_02402 at 2486.031 kb on + strand, within MPMX26_02402 at 2486.258 kb on + strand at 2486.391 kb on + strand at 2486.501 kb on + strand at 2486.541 kb on + strand at 2486.550 kb on + strand at 2486.558 kb on + strand at 2486.568 kb on + strand at 2486.685 kb on + strand, within MPMX26_02403 at 2486.698 kb on - strand, within MPMX26_02403 at 2486.725 kb on + strand, within MPMX26_02403 at 2487.104 kb on + strand, within MPMX26_02403 at 2487.143 kb on + strand, within MPMX26_02403
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,484,095 - -0.1 2,484,171 - -1.2 2,484,171 - -0.1 2,484,228 - MPMX26_02401 0.20 -2.6 2,484,412 - MPMX26_02401 0.61 +0.4 2,484,425 - MPMX26_02401 0.64 -2.2 2,484,425 - MPMX26_02401 0.64 -3.4 2,484,425 - MPMX26_02401 0.64 -0.8 2,484,425 - MPMX26_02401 0.64 -1.2 2,484,443 - MPMX26_02401 0.68 -1.8 2,484,497 - MPMX26_02401 0.79 -2.1 2,484,519 - MPMX26_02401 0.84 -2.6 2,484,692 + -1.5 2,484,697 + -1.5 2,484,700 + -0.5 2,484,743 + -1.6 2,484,757 + -1.6 2,484,757 + -0.4 2,484,798 + -1.7 2,484,798 + -0.9 2,484,798 + -0.8 2,484,798 + -0.5 2,485,069 + -0.1 2,485,117 + -0.1 2,485,117 + +0.3 2,485,276 + MPMX26_02402 0.20 +0.5 2,485,276 + MPMX26_02402 0.20 -3.7 2,485,329 + MPMX26_02402 0.24 -0.1 2,485,465 + MPMX26_02402 0.35 +0.8 2,485,575 + MPMX26_02402 0.43 +0.8 2,485,618 + MPMX26_02402 0.47 +3.5 2,485,753 + MPMX26_02402 0.57 +1.4 2,485,948 + MPMX26_02402 0.72 -0.2 2,486,031 + MPMX26_02402 0.79 +0.5 2,486,258 + -1.3 2,486,391 + -1.6 2,486,501 + +1.3 2,486,541 + +2.3 2,486,550 + +1.4 2,486,558 + +0.9 2,486,568 + -0.3 2,486,685 + MPMX26_02403 0.11 +0.8 2,486,698 - MPMX26_02403 0.11 -1.4 2,486,725 + MPMX26_02403 0.12 -0.9 2,487,104 + MPMX26_02403 0.22 -1.2 2,487,143 + MPMX26_02403 0.23 +0.1
Or see this region's nucleotide sequence