Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01647

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01646 and MPMX26_01647 overlap by 4 nucleotidesMPMX26_01647 and MPMX26_01648 are separated by 262 nucleotides MPMX26_01646: MPMX26_01646 - Poly(3-hydroxyalkanoate) polymerase subunit PhaC, at 1,705,747 to 1,706,853 _01646 MPMX26_01647: MPMX26_01647 - 2-(hydroxymethyl)glutarate dehydrogenase, at 1,706,850 to 1,707,722 _01647 MPMX26_01648: MPMX26_01648 - Arsenical-resistance protein Acr3, at 1,707,985 to 1,709,046 _01648 Position (kb) 1706 1707 1708Strain fitness (log2 ratio) -1 0 1at 1706.921 kb on + strandat 1706.969 kb on + strand, within MPMX26_01647at 1706.969 kb on + strand, within MPMX26_01647at 1707.068 kb on + strand, within MPMX26_01647at 1707.105 kb on + strand, within MPMX26_01647at 1707.113 kb on + strand, within MPMX26_01647at 1707.113 kb on + strand, within MPMX26_01647at 1707.113 kb on + strand, within MPMX26_01647at 1707.191 kb on + strand, within MPMX26_01647at 1707.261 kb on + strand, within MPMX26_01647at 1707.282 kb on + strand, within MPMX26_01647at 1707.305 kb on + strand, within MPMX26_01647at 1707.327 kb on + strand, within MPMX26_01647at 1707.329 kb on + strand, within MPMX26_01647at 1707.431 kb on + strand, within MPMX26_01647at 1707.534 kb on + strand, within MPMX26_01647at 1707.554 kb on + strand, within MPMX26_01647at 1707.656 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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1,706,921 + +0.1
1,706,969 + MPMX26_01647 0.14 -0.0
1,706,969 + MPMX26_01647 0.14 -0.9
1,707,068 + MPMX26_01647 0.25 -1.0
1,707,105 + MPMX26_01647 0.29 +0.4
1,707,113 + MPMX26_01647 0.30 +0.3
1,707,113 + MPMX26_01647 0.30 +0.1
1,707,113 + MPMX26_01647 0.30 -0.2
1,707,191 + MPMX26_01647 0.39 +1.7
1,707,261 + MPMX26_01647 0.47 +0.4
1,707,282 + MPMX26_01647 0.49 -1.3
1,707,305 + MPMX26_01647 0.52 +0.7
1,707,327 + MPMX26_01647 0.55 -0.8
1,707,329 + MPMX26_01647 0.55 +0.2
1,707,431 + MPMX26_01647 0.67 +0.6
1,707,534 + MPMX26_01647 0.78 +1.1
1,707,554 + MPMX26_01647 0.81 -0.2
1,707,656 + -0.2

Or see this region's nucleotide sequence