Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01303

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01301 and MPMX26_01302 are separated by 46 nucleotidesMPMX26_01302 and MPMX26_01303 are separated by 3 nucleotidesMPMX26_01303 and MPMX26_01304 are separated by 3 nucleotidesMPMX26_01304 and MPMX26_01305 are separated by 7 nucleotides MPMX26_01301: MPMX26_01301 - Outer membrane protein assembly factor BamA, at 1,377,306 to 1,379,810 _01301 MPMX26_01302: MPMX26_01302 - hypothetical protein, at 1,379,857 to 1,380,354 _01302 MPMX26_01303: MPMX26_01303 - UDP-3-O-acylglucosamine N-acyltransferase, at 1,380,358 to 1,381,428 _01303 MPMX26_01304: MPMX26_01304 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ, at 1,381,432 to 1,381,911 _01304 MPMX26_01305: MPMX26_01305 - Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase, at 1,381,919 to 1,382,707 _01305 Position (kb) 1380 1381 1382Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1379.821 kb on + strandat 1379.835 kb on + strandat 1379.845 kb on + strandat 1379.880 kb on + strandat 1379.885 kb on + strandat 1379.885 kb on + strandat 1379.885 kb on + strandat 1379.885 kb on + strandat 1379.885 kb on + strandat 1379.885 kb on + strandat 1379.885 kb on + strandat 1379.895 kb on + strandat 1379.906 kb on + strandat 1379.906 kb on + strandat 1379.923 kb on + strand, within MPMX26_01302at 1379.924 kb on + strand, within MPMX26_01302at 1379.924 kb on + strand, within MPMX26_01302at 1379.924 kb on + strand, within MPMX26_01302at 1379.924 kb on + strand, within MPMX26_01302at 1379.924 kb on + strand, within MPMX26_01302at 1379.924 kb on + strand, within MPMX26_01302at 1379.924 kb on + strand, within MPMX26_01302at 1379.924 kb on + strand, within MPMX26_01302at 1379.924 kb on + strand, within MPMX26_01302at 1379.924 kb on + strand, within MPMX26_01302at 1379.925 kb on + strand, within MPMX26_01302at 1379.963 kb on + strand, within MPMX26_01302at 1379.963 kb on + strand, within MPMX26_01302at 1379.969 kb on + strand, within MPMX26_01302at 1379.969 kb on + strand, within MPMX26_01302at 1379.969 kb on + strand, within MPMX26_01302at 1380.023 kb on + strand, within MPMX26_01302at 1380.023 kb on + strand, within MPMX26_01302at 1380.045 kb on + strand, within MPMX26_01302at 1380.095 kb on + strand, within MPMX26_01302at 1380.105 kb on + strand, within MPMX26_01302at 1380.120 kb on + strand, within MPMX26_01302at 1380.120 kb on + strand, within MPMX26_01302at 1380.141 kb on + strand, within MPMX26_01302at 1380.141 kb on + strand, within MPMX26_01302at 1380.141 kb on + strand, within MPMX26_01302at 1380.141 kb on + strand, within MPMX26_01302at 1380.143 kb on + strand, within MPMX26_01302at 1380.170 kb on + strand, within MPMX26_01302at 1380.175 kb on + strand, within MPMX26_01302at 1380.175 kb on + strand, within MPMX26_01302at 1380.198 kb on + strand, within MPMX26_01302at 1380.198 kb on + strand, within MPMX26_01302at 1380.230 kb on + strand, within MPMX26_01302at 1381.906 kb on + strandat 1381.906 kb on + strandat 1381.906 kb on + strandat 1381.906 kb on + strandat 1381.906 kb on + strandat 1381.906 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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1,379,821 + -0.7
1,379,835 + -0.8
1,379,845 + -0.3
1,379,880 + -0.2
1,379,885 + -1.6
1,379,885 + +0.7
1,379,885 + +0.1
1,379,885 + +0.9
1,379,885 + -0.5
1,379,885 + -0.3
1,379,885 + +0.3
1,379,895 + +0.3
1,379,906 + +0.9
1,379,906 + +0.3
1,379,923 + MPMX26_01302 0.13 +0.3
1,379,924 + MPMX26_01302 0.13 +0.2
1,379,924 + MPMX26_01302 0.13 -0.5
1,379,924 + MPMX26_01302 0.13 +0.9
1,379,924 + MPMX26_01302 0.13 -0.6
1,379,924 + MPMX26_01302 0.13 +0.2
1,379,924 + MPMX26_01302 0.13 -0.6
1,379,924 + MPMX26_01302 0.13 +0.5
1,379,924 + MPMX26_01302 0.13 -0.4
1,379,924 + MPMX26_01302 0.13 +0.3
1,379,924 + MPMX26_01302 0.13 +0.6
1,379,925 + MPMX26_01302 0.14 -0.5
1,379,963 + MPMX26_01302 0.21 +0.3
1,379,963 + MPMX26_01302 0.21 -0.5
1,379,969 + MPMX26_01302 0.22 -0.0
1,379,969 + MPMX26_01302 0.22 -0.3
1,379,969 + MPMX26_01302 0.22 +0.0
1,380,023 + MPMX26_01302 0.33 -0.4
1,380,023 + MPMX26_01302 0.33 -1.0
1,380,045 + MPMX26_01302 0.38 +0.3
1,380,095 + MPMX26_01302 0.48 -0.8
1,380,105 + MPMX26_01302 0.50 +0.6
1,380,120 + MPMX26_01302 0.53 +0.2
1,380,120 + MPMX26_01302 0.53 -0.5
1,380,141 + MPMX26_01302 0.57 +0.1
1,380,141 + MPMX26_01302 0.57 -0.4
1,380,141 + MPMX26_01302 0.57 +0.2
1,380,141 + MPMX26_01302 0.57 -0.2
1,380,143 + MPMX26_01302 0.57 +0.9
1,380,170 + MPMX26_01302 0.63 -0.4
1,380,175 + MPMX26_01302 0.64 +0.5
1,380,175 + MPMX26_01302 0.64 -0.1
1,380,198 + MPMX26_01302 0.68 -0.0
1,380,198 + MPMX26_01302 0.68 -0.1
1,380,230 + MPMX26_01302 0.75 -0.6
1,381,906 + -1.2
1,381,906 + -0.2
1,381,906 + -1.1
1,381,906 + -4.1
1,381,906 + -1.0
1,381,906 + +0.7

Or see this region's nucleotide sequence