Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01081

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01079 and MPMX26_01080 are separated by 142 nucleotidesMPMX26_01080 and MPMX26_01081 are separated by 14 nucleotidesMPMX26_01081 and MPMX26_01082 are separated by 103 nucleotidesMPMX26_01082 and MPMX26_01083 are separated by 61 nucleotides MPMX26_01079: MPMX26_01079 - Adenine deaminase, at 1,147,444 to 1,148,442 _01079 MPMX26_01080: MPMX26_01080 - Mannosyl-3-phosphoglycerate phosphatase, at 1,148,585 to 1,149,340 _01080 MPMX26_01081: MPMX26_01081 - Glucosyl-3-phosphoglycerate synthase, at 1,149,355 to 1,150,566 _01081 MPMX26_01082: MPMX26_01082 - hypothetical protein, at 1,150,670 to 1,151,050 _01082 MPMX26_01083: MPMX26_01083 - Ribonuclease HII, at 1,151,112 to 1,151,687 _01083 Position (kb) 1149 1150 1151Strain fitness (log2 ratio) -2 -1 0 1 2at 1148.464 kb on + strandat 1150.748 kb on + strand, within MPMX26_01082at 1150.813 kb on + strand, within MPMX26_01082at 1150.813 kb on + strand, within MPMX26_01082at 1150.813 kb on + strand, within MPMX26_01082at 1150.813 kb on + strand, within MPMX26_01082at 1150.813 kb on + strand, within MPMX26_01082at 1150.823 kb on + strand, within MPMX26_01082at 1150.864 kb on + strand, within MPMX26_01082at 1150.928 kb on + strand, within MPMX26_01082at 1150.954 kb on + strand, within MPMX26_01082at 1150.954 kb on + strand, within MPMX26_01082at 1150.954 kb on + strand, within MPMX26_01082at 1150.954 kb on + strand, within MPMX26_01082at 1150.970 kb on + strand, within MPMX26_01082at 1150.981 kb on + strand, within MPMX26_01082at 1151.008 kb on + strand, within MPMX26_01082at 1151.124 kb on + strandat 1151.135 kb on + strandat 1151.172 kb on + strand, within MPMX26_01083at 1151.201 kb on + strand, within MPMX26_01083at 1151.209 kb on + strand, within MPMX26_01083at 1151.277 kb on + strand, within MPMX26_01083at 1151.288 kb on + strand, within MPMX26_01083at 1151.367 kb on + strand, within MPMX26_01083at 1151.367 kb on + strand, within MPMX26_01083at 1151.367 kb on + strand, within MPMX26_01083at 1151.367 kb on + strand, within MPMX26_01083at 1151.367 kb on + strand, within MPMX26_01083at 1151.367 kb on + strand, within MPMX26_01083at 1151.402 kb on + strand, within MPMX26_01083at 1151.430 kb on + strand, within MPMX26_01083at 1151.433 kb on + strand, within MPMX26_01083at 1151.435 kb on + strand, within MPMX26_01083at 1151.435 kb on + strand, within MPMX26_01083at 1151.448 kb on + strand, within MPMX26_01083at 1151.453 kb on + strand, within MPMX26_01083at 1151.454 kb on + strand, within MPMX26_01083at 1151.466 kb on + strand, within MPMX26_01083at 1151.466 kb on + strand, within MPMX26_01083at 1151.466 kb on + strand, within MPMX26_01083at 1151.466 kb on + strand, within MPMX26_01083at 1151.501 kb on + strand, within MPMX26_01083at 1151.501 kb on + strand, within MPMX26_01083at 1151.501 kb on + strand, within MPMX26_01083at 1151.537 kb on + strand, within MPMX26_01083at 1151.543 kb on + strand, within MPMX26_01083at 1151.553 kb on + strand, within MPMX26_01083at 1151.561 kb on - strand, within MPMX26_01083

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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1,148,464 + +0.0
1,150,748 + MPMX26_01082 0.20 -0.8
1,150,813 + MPMX26_01082 0.38 +0.5
1,150,813 + MPMX26_01082 0.38 +1.2
1,150,813 + MPMX26_01082 0.38 +0.8
1,150,813 + MPMX26_01082 0.38 +0.9
1,150,813 + MPMX26_01082 0.38 +1.2
1,150,823 + MPMX26_01082 0.40 +0.4
1,150,864 + MPMX26_01082 0.51 +0.4
1,150,928 + MPMX26_01082 0.68 -0.2
1,150,954 + MPMX26_01082 0.75 +0.3
1,150,954 + MPMX26_01082 0.75 +2.2
1,150,954 + MPMX26_01082 0.75 +0.1
1,150,954 + MPMX26_01082 0.75 -0.1
1,150,970 + MPMX26_01082 0.79 +0.0
1,150,981 + MPMX26_01082 0.82 -0.1
1,151,008 + MPMX26_01082 0.89 -0.0
1,151,124 + +0.4
1,151,135 + +0.4
1,151,172 + MPMX26_01083 0.10 +0.9
1,151,201 + MPMX26_01083 0.15 -0.3
1,151,209 + MPMX26_01083 0.17 -1.8
1,151,277 + MPMX26_01083 0.29 +0.5
1,151,288 + MPMX26_01083 0.31 -0.2
1,151,367 + MPMX26_01083 0.44 -0.5
1,151,367 + MPMX26_01083 0.44 -0.3
1,151,367 + MPMX26_01083 0.44 +0.8
1,151,367 + MPMX26_01083 0.44 +0.3
1,151,367 + MPMX26_01083 0.44 -1.0
1,151,367 + MPMX26_01083 0.44 -1.6
1,151,402 + MPMX26_01083 0.50 -0.8
1,151,430 + MPMX26_01083 0.55 +0.4
1,151,433 + MPMX26_01083 0.56 +0.2
1,151,435 + MPMX26_01083 0.56 +1.2
1,151,435 + MPMX26_01083 0.56 +0.4
1,151,448 + MPMX26_01083 0.58 +0.5
1,151,453 + MPMX26_01083 0.59 +0.4
1,151,454 + MPMX26_01083 0.59 -0.4
1,151,466 + MPMX26_01083 0.61 +0.1
1,151,466 + MPMX26_01083 0.61 -0.3
1,151,466 + MPMX26_01083 0.61 +0.4
1,151,466 + MPMX26_01083 0.61 -0.1
1,151,501 + MPMX26_01083 0.68 -2.5
1,151,501 + MPMX26_01083 0.68 +0.4
1,151,501 + MPMX26_01083 0.68 +0.1
1,151,537 + MPMX26_01083 0.74 -1.0
1,151,543 + MPMX26_01083 0.75 +0.4
1,151,553 + MPMX26_01083 0.77 -2.2
1,151,561 - MPMX26_01083 0.78 +0.7

Or see this region's nucleotide sequence