Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01006 and MPMX26_01007 are separated by 116 nucleotides MPMX26_01007 and MPMX26_01008 are separated by 180 nucleotides
MPMX26_01006: MPMX26_01006 - NADH dehydrogenase, at 1,058,250 to 1,059,521
_01006
MPMX26_01007: MPMX26_01007 - D-alanyl-D-alanine carboxypeptidase DacA, at 1,059,638 to 1,060,951
_01007
MPMX26_01008: MPMX26_01008 - hypothetical protein, at 1,061,132 to 1,062,835
_01008
Position (kb)
1059
1060
1061 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1059.399 kb on - strand at 1059.650 kb on - strand at 1059.671 kb on - strand at 1059.716 kb on - strand at 1059.779 kb on - strand, within MPMX26_01007 at 1059.805 kb on - strand, within MPMX26_01007 at 1059.805 kb on - strand, within MPMX26_01007 at 1059.805 kb on - strand, within MPMX26_01007 at 1059.805 kb on - strand, within MPMX26_01007 at 1059.805 kb on - strand, within MPMX26_01007 at 1059.815 kb on - strand, within MPMX26_01007 at 1059.845 kb on - strand, within MPMX26_01007 at 1059.848 kb on - strand, within MPMX26_01007 at 1059.855 kb on - strand, within MPMX26_01007 at 1059.872 kb on - strand, within MPMX26_01007 at 1059.884 kb on - strand, within MPMX26_01007 at 1059.895 kb on - strand, within MPMX26_01007 at 1059.895 kb on - strand, within MPMX26_01007 at 1059.903 kb on - strand, within MPMX26_01007 at 1059.923 kb on - strand, within MPMX26_01007 at 1059.923 kb on - strand, within MPMX26_01007 at 1059.932 kb on - strand, within MPMX26_01007 at 1059.939 kb on - strand, within MPMX26_01007 at 1059.939 kb on - strand, within MPMX26_01007 at 1059.951 kb on - strand, within MPMX26_01007 at 1059.951 kb on - strand, within MPMX26_01007 at 1059.951 kb on - strand, within MPMX26_01007 at 1059.951 kb on - strand, within MPMX26_01007 at 1059.951 kb on - strand, within MPMX26_01007 at 1059.951 kb on - strand, within MPMX26_01007 at 1060.144 kb on - strand, within MPMX26_01007 at 1060.172 kb on - strand, within MPMX26_01007 at 1060.177 kb on - strand, within MPMX26_01007 at 1060.256 kb on - strand, within MPMX26_01007 at 1060.256 kb on - strand, within MPMX26_01007 at 1060.258 kb on - strand, within MPMX26_01007 at 1060.258 kb on - strand, within MPMX26_01007 at 1060.258 kb on - strand, within MPMX26_01007 at 1060.258 kb on - strand, within MPMX26_01007 at 1060.258 kb on - strand, within MPMX26_01007 at 1060.258 kb on - strand, within MPMX26_01007 at 1060.258 kb on - strand, within MPMX26_01007 at 1060.258 kb on - strand, within MPMX26_01007 at 1060.258 kb on - strand, within MPMX26_01007 at 1060.258 kb on - strand, within MPMX26_01007 at 1060.258 kb on - strand, within MPMX26_01007 at 1060.264 kb on - strand, within MPMX26_01007 at 1060.356 kb on - strand, within MPMX26_01007 at 1060.363 kb on - strand, within MPMX26_01007 at 1060.399 kb on - strand, within MPMX26_01007 at 1060.412 kb on - strand, within MPMX26_01007 at 1060.425 kb on - strand, within MPMX26_01007 at 1060.442 kb on - strand, within MPMX26_01007 at 1060.566 kb on - strand, within MPMX26_01007 at 1060.566 kb on - strand, within MPMX26_01007 at 1060.568 kb on - strand, within MPMX26_01007 at 1060.568 kb on - strand, within MPMX26_01007 at 1060.568 kb on - strand, within MPMX26_01007 at 1060.568 kb on - strand, within MPMX26_01007 at 1060.568 kb on - strand, within MPMX26_01007 at 1060.568 kb on - strand, within MPMX26_01007 at 1060.568 kb on - strand, within MPMX26_01007 at 1060.613 kb on - strand, within MPMX26_01007 at 1060.613 kb on - strand, within MPMX26_01007 at 1060.613 kb on - strand, within MPMX26_01007 at 1060.628 kb on - strand, within MPMX26_01007 at 1060.628 kb on - strand, within MPMX26_01007 at 1060.647 kb on - strand, within MPMX26_01007 at 1060.648 kb on - strand, within MPMX26_01007 at 1060.754 kb on - strand, within MPMX26_01007 at 1060.777 kb on - strand, within MPMX26_01007 at 1060.787 kb on - strand, within MPMX26_01007 at 1060.787 kb on - strand, within MPMX26_01007 at 1060.787 kb on - strand, within MPMX26_01007 at 1060.787 kb on - strand, within MPMX26_01007 at 1060.792 kb on - strand, within MPMX26_01007 at 1060.792 kb on - strand, within MPMX26_01007 at 1060.792 kb on - strand, within MPMX26_01007 at 1060.795 kb on - strand, within MPMX26_01007 at 1060.797 kb on - strand, within MPMX26_01007 at 1060.849 kb on - strand at 1060.849 kb on - strand at 1060.849 kb on - strand at 1060.862 kb on - strand at 1060.871 kb on - strand at 1060.883 kb on - strand at 1060.883 kb on - strand at 1060.898 kb on - strand at 1060.898 kb on - strand at 1060.898 kb on - strand at 1060.898 kb on - strand at 1060.908 kb on - strand at 1060.908 kb on - strand at 1060.908 kb on - strand at 1060.908 kb on - strand at 1060.908 kb on - strand at 1060.908 kb on - strand at 1060.913 kb on - strand at 1060.918 kb on - strand at 1061.132 kb on + strand at 1061.171 kb on + strand at 1061.186 kb on + strand at 1061.200 kb on + strand at 1061.205 kb on + strand at 1061.216 kb on + strand at 1061.221 kb on + strand at 1061.230 kb on + strand at 1061.275 kb on + strand at 1061.291 kb on + strand at 1061.296 kb on + strand at 1061.353 kb on + strand, within MPMX26_01008 at 1061.353 kb on + strand, within MPMX26_01008 at 1061.353 kb on + strand, within MPMX26_01008 at 1061.353 kb on + strand, within MPMX26_01008 at 1061.353 kb on + strand, within MPMX26_01008 at 1061.353 kb on + strand, within MPMX26_01008 at 1061.353 kb on + strand, within MPMX26_01008 at 1061.379 kb on + strand, within MPMX26_01008 at 1061.381 kb on + strand, within MPMX26_01008 at 1061.393 kb on + strand, within MPMX26_01008 at 1061.393 kb on + strand, within MPMX26_01008 at 1061.393 kb on + strand, within MPMX26_01008 at 1061.393 kb on + strand, within MPMX26_01008 at 1061.393 kb on + strand, within MPMX26_01008 at 1061.393 kb on + strand, within MPMX26_01008 at 1061.400 kb on + strand, within MPMX26_01008 at 1061.400 kb on + strand, within MPMX26_01008 at 1061.404 kb on + strand, within MPMX26_01008 at 1061.423 kb on + strand, within MPMX26_01008 at 1061.432 kb on + strand, within MPMX26_01008 at 1061.463 kb on + strand, within MPMX26_01008 at 1061.463 kb on + strand, within MPMX26_01008 at 1061.463 kb on + strand, within MPMX26_01008 at 1061.463 kb on + strand, within MPMX26_01008 at 1061.469 kb on + strand, within MPMX26_01008 at 1061.474 kb on + strand, within MPMX26_01008 at 1061.474 kb on + strand, within MPMX26_01008 at 1061.505 kb on + strand, within MPMX26_01008 at 1061.555 kb on + strand, within MPMX26_01008 at 1061.555 kb on + strand, within MPMX26_01008 at 1061.563 kb on + strand, within MPMX26_01008 at 1061.592 kb on + strand, within MPMX26_01008 at 1061.615 kb on + strand, within MPMX26_01008 at 1061.630 kb on + strand, within MPMX26_01008 at 1061.630 kb on + strand, within MPMX26_01008 at 1061.645 kb on + strand, within MPMX26_01008 at 1061.669 kb on + strand, within MPMX26_01008 at 1061.688 kb on + strand, within MPMX26_01008 at 1061.732 kb on + strand, within MPMX26_01008 at 1061.773 kb on + strand, within MPMX26_01008 at 1061.773 kb on + strand, within MPMX26_01008 at 1061.773 kb on + strand, within MPMX26_01008 at 1061.773 kb on + strand, within MPMX26_01008 at 1061.795 kb on + strand, within MPMX26_01008 at 1061.814 kb on + strand, within MPMX26_01008 at 1061.827 kb on + strand, within MPMX26_01008 at 1061.827 kb on + strand, within MPMX26_01008 at 1061.827 kb on + strand, within MPMX26_01008 at 1061.846 kb on + strand, within MPMX26_01008 at 1061.846 kb on + strand, within MPMX26_01008 at 1061.846 kb on + strand, within MPMX26_01008 at 1061.846 kb on + strand, within MPMX26_01008 at 1061.846 kb on + strand, within MPMX26_01008 at 1061.846 kb on + strand, within MPMX26_01008 at 1061.854 kb on - strand, within MPMX26_01008 at 1061.887 kb on + strand, within MPMX26_01008 at 1061.892 kb on + strand, within MPMX26_01008 at 1061.892 kb on + strand, within MPMX26_01008 at 1061.914 kb on + strand, within MPMX26_01008 at 1061.914 kb on + strand, within MPMX26_01008 at 1061.932 kb on + strand, within MPMX26_01008 at 1061.932 kb on + strand, within MPMX26_01008 at 1061.934 kb on + strand, within MPMX26_01008 at 1061.934 kb on + strand, within MPMX26_01008 at 1061.934 kb on + strand, within MPMX26_01008 at 1061.934 kb on + strand, within MPMX26_01008 at 1061.934 kb on + strand, within MPMX26_01008 at 1061.934 kb on + strand, within MPMX26_01008 at 1061.934 kb on + strand, within MPMX26_01008 at 1061.934 kb on + strand, within MPMX26_01008 at 1061.934 kb on + strand, within MPMX26_01008 at 1061.934 kb on + strand, within MPMX26_01008 at 1061.934 kb on + strand, within MPMX26_01008 at 1061.942 kb on + strand, within MPMX26_01008 at 1061.942 kb on - strand, within MPMX26_01008 at 1061.944 kb on + strand, within MPMX26_01008 at 1061.944 kb on + strand, within MPMX26_01008 at 1061.944 kb on + strand, within MPMX26_01008 at 1061.944 kb on + strand, within MPMX26_01008 at 1061.944 kb on + strand, within MPMX26_01008 at 1061.944 kb on + strand, within MPMX26_01008
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,059,399 - -0.0 1,059,650 - +0.2 1,059,671 - -0.1 1,059,716 - -0.1 1,059,779 - MPMX26_01007 0.11 +0.2 1,059,805 - MPMX26_01007 0.13 +0.3 1,059,805 - MPMX26_01007 0.13 +1.0 1,059,805 - MPMX26_01007 0.13 -0.2 1,059,805 - MPMX26_01007 0.13 -0.3 1,059,805 - MPMX26_01007 0.13 -0.0 1,059,815 - MPMX26_01007 0.13 -0.9 1,059,845 - MPMX26_01007 0.16 -0.2 1,059,848 - MPMX26_01007 0.16 -0.4 1,059,855 - MPMX26_01007 0.17 +2.1 1,059,872 - MPMX26_01007 0.18 -0.2 1,059,884 - MPMX26_01007 0.19 -0.7 1,059,895 - MPMX26_01007 0.20 +0.2 1,059,895 - MPMX26_01007 0.20 -0.1 1,059,903 - MPMX26_01007 0.20 -1.8 1,059,923 - MPMX26_01007 0.22 +2.1 1,059,923 - MPMX26_01007 0.22 +0.6 1,059,932 - MPMX26_01007 0.22 -0.3 1,059,939 - MPMX26_01007 0.23 -0.0 1,059,939 - MPMX26_01007 0.23 -0.5 1,059,951 - MPMX26_01007 0.24 -0.4 1,059,951 - MPMX26_01007 0.24 +1.5 1,059,951 - MPMX26_01007 0.24 +1.1 1,059,951 - MPMX26_01007 0.24 -1.1 1,059,951 - MPMX26_01007 0.24 +0.1 1,059,951 - MPMX26_01007 0.24 +0.3 1,060,144 - MPMX26_01007 0.39 +0.0 1,060,172 - MPMX26_01007 0.41 -0.5 1,060,177 - MPMX26_01007 0.41 -1.2 1,060,256 - MPMX26_01007 0.47 +0.2 1,060,256 - MPMX26_01007 0.47 +0.2 1,060,258 - MPMX26_01007 0.47 +0.2 1,060,258 - MPMX26_01007 0.47 +0.0 1,060,258 - MPMX26_01007 0.47 +1.2 1,060,258 - MPMX26_01007 0.47 -2.1 1,060,258 - MPMX26_01007 0.47 -1.0 1,060,258 - MPMX26_01007 0.47 -0.2 1,060,258 - MPMX26_01007 0.47 -0.4 1,060,258 - MPMX26_01007 0.47 +0.7 1,060,258 - MPMX26_01007 0.47 +0.1 1,060,258 - MPMX26_01007 0.47 +0.3 1,060,258 - MPMX26_01007 0.47 +0.9 1,060,264 - MPMX26_01007 0.48 +0.8 1,060,356 - MPMX26_01007 0.55 +0.4 1,060,363 - MPMX26_01007 0.55 -0.8 1,060,399 - MPMX26_01007 0.58 -0.1 1,060,412 - MPMX26_01007 0.59 -0.5 1,060,425 - MPMX26_01007 0.60 -0.7 1,060,442 - MPMX26_01007 0.61 -0.7 1,060,566 - MPMX26_01007 0.71 +1.0 1,060,566 - MPMX26_01007 0.71 +0.4 1,060,568 - MPMX26_01007 0.71 +0.2 1,060,568 - MPMX26_01007 0.71 -0.1 1,060,568 - MPMX26_01007 0.71 +0.4 1,060,568 - MPMX26_01007 0.71 +0.5 1,060,568 - MPMX26_01007 0.71 -0.3 1,060,568 - MPMX26_01007 0.71 -0.1 1,060,568 - MPMX26_01007 0.71 +0.4 1,060,613 - MPMX26_01007 0.74 +0.5 1,060,613 - MPMX26_01007 0.74 +1.0 1,060,613 - MPMX26_01007 0.74 +0.3 1,060,628 - MPMX26_01007 0.75 +1.0 1,060,628 - MPMX26_01007 0.75 -0.2 1,060,647 - MPMX26_01007 0.77 +2.4 1,060,648 - MPMX26_01007 0.77 +0.1 1,060,754 - MPMX26_01007 0.85 +0.2 1,060,777 - MPMX26_01007 0.87 +1.2 1,060,787 - MPMX26_01007 0.87 -0.1 1,060,787 - MPMX26_01007 0.87 -0.4 1,060,787 - MPMX26_01007 0.87 +0.0 1,060,787 - MPMX26_01007 0.87 -0.3 1,060,792 - MPMX26_01007 0.88 +0.3 1,060,792 - MPMX26_01007 0.88 +0.5 1,060,792 - MPMX26_01007 0.88 +0.5 1,060,795 - MPMX26_01007 0.88 -0.7 1,060,797 - MPMX26_01007 0.88 +0.5 1,060,849 - -0.2 1,060,849 - -0.7 1,060,849 - +0.7 1,060,862 - +0.6 1,060,871 - -0.6 1,060,883 - +0.9 1,060,883 - -0.1 1,060,898 - -0.5 1,060,898 - +0.1 1,060,898 - -0.9 1,060,898 - +0.1 1,060,908 - -1.2 1,060,908 - +0.1 1,060,908 - +0.0 1,060,908 - -0.5 1,060,908 - +0.6 1,060,908 - -0.2 1,060,913 - +0.8 1,060,918 - -1.2 1,061,132 + +0.0 1,061,171 + -0.8 1,061,186 + -0.2 1,061,200 + +0.5 1,061,205 + -0.0 1,061,216 + -0.8 1,061,221 + -1.6 1,061,230 + +0.1 1,061,275 + +1.8 1,061,291 + +0.6 1,061,296 + -0.4 1,061,353 + MPMX26_01008 0.13 -0.4 1,061,353 + MPMX26_01008 0.13 +0.2 1,061,353 + MPMX26_01008 0.13 +1.2 1,061,353 + MPMX26_01008 0.13 -1.3 1,061,353 + MPMX26_01008 0.13 +0.6 1,061,353 + MPMX26_01008 0.13 -0.5 1,061,353 + MPMX26_01008 0.13 -0.5 1,061,379 + MPMX26_01008 0.14 +0.3 1,061,381 + MPMX26_01008 0.15 -0.4 1,061,393 + MPMX26_01008 0.15 +0.7 1,061,393 + MPMX26_01008 0.15 +0.2 1,061,393 + MPMX26_01008 0.15 +0.5 1,061,393 + MPMX26_01008 0.15 -0.9 1,061,393 + MPMX26_01008 0.15 -0.6 1,061,393 + MPMX26_01008 0.15 +0.3 1,061,400 + MPMX26_01008 0.16 +0.6 1,061,400 + MPMX26_01008 0.16 +1.0 1,061,404 + MPMX26_01008 0.16 +0.3 1,061,423 + MPMX26_01008 0.17 +0.0 1,061,432 + MPMX26_01008 0.18 +2.4 1,061,463 + MPMX26_01008 0.19 -0.8 1,061,463 + MPMX26_01008 0.19 +0.2 1,061,463 + MPMX26_01008 0.19 +0.2 1,061,463 + MPMX26_01008 0.19 +0.2 1,061,469 + MPMX26_01008 0.20 +0.5 1,061,474 + MPMX26_01008 0.20 -0.2 1,061,474 + MPMX26_01008 0.20 +0.2 1,061,505 + MPMX26_01008 0.22 +0.3 1,061,555 + MPMX26_01008 0.25 -0.1 1,061,555 + MPMX26_01008 0.25 -0.4 1,061,563 + MPMX26_01008 0.25 +0.8 1,061,592 + MPMX26_01008 0.27 +0.3 1,061,615 + MPMX26_01008 0.28 +0.2 1,061,630 + MPMX26_01008 0.29 +0.0 1,061,630 + MPMX26_01008 0.29 -0.2 1,061,645 + MPMX26_01008 0.30 +0.6 1,061,669 + MPMX26_01008 0.32 +1.8 1,061,688 + MPMX26_01008 0.33 +0.8 1,061,732 + MPMX26_01008 0.35 +0.3 1,061,773 + MPMX26_01008 0.38 +0.6 1,061,773 + MPMX26_01008 0.38 -0.6 1,061,773 + MPMX26_01008 0.38 +0.7 1,061,773 + MPMX26_01008 0.38 -1.4 1,061,795 + MPMX26_01008 0.39 -1.5 1,061,814 + MPMX26_01008 0.40 +0.8 1,061,827 + MPMX26_01008 0.41 +1.4 1,061,827 + MPMX26_01008 0.41 -0.1 1,061,827 + MPMX26_01008 0.41 -0.1 1,061,846 + MPMX26_01008 0.42 -0.5 1,061,846 + MPMX26_01008 0.42 -1.0 1,061,846 + MPMX26_01008 0.42 +0.8 1,061,846 + MPMX26_01008 0.42 -1.4 1,061,846 + MPMX26_01008 0.42 -0.1 1,061,846 + MPMX26_01008 0.42 -0.2 1,061,854 - MPMX26_01008 0.42 -2.2 1,061,887 + MPMX26_01008 0.44 -0.2 1,061,892 + MPMX26_01008 0.45 +1.0 1,061,892 + MPMX26_01008 0.45 +0.6 1,061,914 + MPMX26_01008 0.46 -0.3 1,061,914 + MPMX26_01008 0.46 -0.2 1,061,932 + MPMX26_01008 0.47 +0.9 1,061,932 + MPMX26_01008 0.47 -0.9 1,061,934 + MPMX26_01008 0.47 -0.4 1,061,934 + MPMX26_01008 0.47 -0.8 1,061,934 + MPMX26_01008 0.47 -0.0 1,061,934 + MPMX26_01008 0.47 -3.0 1,061,934 + MPMX26_01008 0.47 +0.2 1,061,934 + MPMX26_01008 0.47 -0.9 1,061,934 + MPMX26_01008 0.47 +0.2 1,061,934 + MPMX26_01008 0.47 +0.3 1,061,934 + MPMX26_01008 0.47 +1.3 1,061,934 + MPMX26_01008 0.47 +0.6 1,061,934 + MPMX26_01008 0.47 -1.5 1,061,942 + MPMX26_01008 0.48 -1.3 1,061,942 - MPMX26_01008 0.48 +1.5 1,061,944 + MPMX26_01008 0.48 +0.5 1,061,944 + MPMX26_01008 0.48 -0.2 1,061,944 + MPMX26_01008 0.48 -0.5 1,061,944 + MPMX26_01008 0.48 +0.0 1,061,944 + MPMX26_01008 0.48 -0.7 1,061,944 + MPMX26_01008 0.48 -0.8
Or see this region's nucleotide sequence