Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01007

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01006 and MPMX26_01007 are separated by 116 nucleotidesMPMX26_01007 and MPMX26_01008 are separated by 180 nucleotides MPMX26_01006: MPMX26_01006 - NADH dehydrogenase, at 1,058,250 to 1,059,521 _01006 MPMX26_01007: MPMX26_01007 - D-alanyl-D-alanine carboxypeptidase DacA, at 1,059,638 to 1,060,951 _01007 MPMX26_01008: MPMX26_01008 - hypothetical protein, at 1,061,132 to 1,062,835 _01008 Position (kb) 1059 1060 1061Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1059.399 kb on - strandat 1059.650 kb on - strandat 1059.671 kb on - strandat 1059.716 kb on - strandat 1059.779 kb on - strand, within MPMX26_01007at 1059.805 kb on - strand, within MPMX26_01007at 1059.805 kb on - strand, within MPMX26_01007at 1059.805 kb on - strand, within MPMX26_01007at 1059.805 kb on - strand, within MPMX26_01007at 1059.805 kb on - strand, within MPMX26_01007at 1059.815 kb on - strand, within MPMX26_01007at 1059.845 kb on - strand, within MPMX26_01007at 1059.848 kb on - strand, within MPMX26_01007at 1059.855 kb on - strand, within MPMX26_01007at 1059.872 kb on - strand, within MPMX26_01007at 1059.884 kb on - strand, within MPMX26_01007at 1059.895 kb on - strand, within MPMX26_01007at 1059.895 kb on - strand, within MPMX26_01007at 1059.903 kb on - strand, within MPMX26_01007at 1059.923 kb on - strand, within MPMX26_01007at 1059.923 kb on - strand, within MPMX26_01007at 1059.932 kb on - strand, within MPMX26_01007at 1059.939 kb on - strand, within MPMX26_01007at 1059.939 kb on - strand, within MPMX26_01007at 1059.951 kb on - strand, within MPMX26_01007at 1059.951 kb on - strand, within MPMX26_01007at 1059.951 kb on - strand, within MPMX26_01007at 1059.951 kb on - strand, within MPMX26_01007at 1059.951 kb on - strand, within MPMX26_01007at 1059.951 kb on - strand, within MPMX26_01007at 1060.144 kb on - strand, within MPMX26_01007at 1060.172 kb on - strand, within MPMX26_01007at 1060.177 kb on - strand, within MPMX26_01007at 1060.256 kb on - strand, within MPMX26_01007at 1060.256 kb on - strand, within MPMX26_01007at 1060.258 kb on - strand, within MPMX26_01007at 1060.258 kb on - strand, within MPMX26_01007at 1060.258 kb on - strand, within MPMX26_01007at 1060.258 kb on - strand, within MPMX26_01007at 1060.258 kb on - strand, within MPMX26_01007at 1060.258 kb on - strand, within MPMX26_01007at 1060.258 kb on - strand, within MPMX26_01007at 1060.258 kb on - strand, within MPMX26_01007at 1060.258 kb on - strand, within MPMX26_01007at 1060.258 kb on - strand, within MPMX26_01007at 1060.258 kb on - strand, within MPMX26_01007at 1060.264 kb on - strand, within MPMX26_01007at 1060.356 kb on - strand, within MPMX26_01007at 1060.363 kb on - strand, within MPMX26_01007at 1060.399 kb on - strand, within MPMX26_01007at 1060.412 kb on - strand, within MPMX26_01007at 1060.425 kb on - strand, within MPMX26_01007at 1060.442 kb on - strand, within MPMX26_01007at 1060.566 kb on - strand, within MPMX26_01007at 1060.566 kb on - strand, within MPMX26_01007at 1060.568 kb on - strand, within MPMX26_01007at 1060.568 kb on - strand, within MPMX26_01007at 1060.568 kb on - strand, within MPMX26_01007at 1060.568 kb on - strand, within MPMX26_01007at 1060.568 kb on - strand, within MPMX26_01007at 1060.568 kb on - strand, within MPMX26_01007at 1060.568 kb on - strand, within MPMX26_01007at 1060.613 kb on - strand, within MPMX26_01007at 1060.613 kb on - strand, within MPMX26_01007at 1060.613 kb on - strand, within MPMX26_01007at 1060.628 kb on - strand, within MPMX26_01007at 1060.628 kb on - strand, within MPMX26_01007at 1060.647 kb on - strand, within MPMX26_01007at 1060.648 kb on - strand, within MPMX26_01007at 1060.754 kb on - strand, within MPMX26_01007at 1060.777 kb on - strand, within MPMX26_01007at 1060.787 kb on - strand, within MPMX26_01007at 1060.787 kb on - strand, within MPMX26_01007at 1060.787 kb on - strand, within MPMX26_01007at 1060.787 kb on - strand, within MPMX26_01007at 1060.792 kb on - strand, within MPMX26_01007at 1060.792 kb on - strand, within MPMX26_01007at 1060.792 kb on - strand, within MPMX26_01007at 1060.795 kb on - strand, within MPMX26_01007at 1060.797 kb on - strand, within MPMX26_01007at 1060.849 kb on - strandat 1060.849 kb on - strandat 1060.849 kb on - strandat 1060.862 kb on - strandat 1060.871 kb on - strandat 1060.883 kb on - strandat 1060.883 kb on - strandat 1060.898 kb on - strandat 1060.898 kb on - strandat 1060.898 kb on - strandat 1060.898 kb on - strandat 1060.908 kb on - strandat 1060.908 kb on - strandat 1060.908 kb on - strandat 1060.908 kb on - strandat 1060.908 kb on - strandat 1060.908 kb on - strandat 1060.913 kb on - strandat 1060.918 kb on - strandat 1061.132 kb on + strandat 1061.171 kb on + strandat 1061.186 kb on + strandat 1061.200 kb on + strandat 1061.205 kb on + strandat 1061.216 kb on + strandat 1061.221 kb on + strandat 1061.230 kb on + strandat 1061.275 kb on + strandat 1061.291 kb on + strandat 1061.296 kb on + strandat 1061.353 kb on + strand, within MPMX26_01008at 1061.353 kb on + strand, within MPMX26_01008at 1061.353 kb on + strand, within MPMX26_01008at 1061.353 kb on + strand, within MPMX26_01008at 1061.353 kb on + strand, within MPMX26_01008at 1061.353 kb on + strand, within MPMX26_01008at 1061.353 kb on + strand, within MPMX26_01008at 1061.379 kb on + strand, within MPMX26_01008at 1061.381 kb on + strand, within MPMX26_01008at 1061.393 kb on + strand, within MPMX26_01008at 1061.393 kb on + strand, within MPMX26_01008at 1061.393 kb on + strand, within MPMX26_01008at 1061.393 kb on + strand, within MPMX26_01008at 1061.393 kb on + strand, within MPMX26_01008at 1061.393 kb on + strand, within MPMX26_01008at 1061.400 kb on + strand, within MPMX26_01008at 1061.400 kb on + strand, within MPMX26_01008at 1061.404 kb on + strand, within MPMX26_01008at 1061.423 kb on + strand, within MPMX26_01008at 1061.432 kb on + strand, within MPMX26_01008at 1061.463 kb on + strand, within MPMX26_01008at 1061.463 kb on + strand, within MPMX26_01008at 1061.463 kb on + strand, within MPMX26_01008at 1061.463 kb on + strand, within MPMX26_01008at 1061.469 kb on + strand, within MPMX26_01008at 1061.474 kb on + strand, within MPMX26_01008at 1061.474 kb on + strand, within MPMX26_01008at 1061.505 kb on + strand, within MPMX26_01008at 1061.555 kb on + strand, within MPMX26_01008at 1061.555 kb on + strand, within MPMX26_01008at 1061.563 kb on + strand, within MPMX26_01008at 1061.592 kb on + strand, within MPMX26_01008at 1061.615 kb on + strand, within MPMX26_01008at 1061.630 kb on + strand, within MPMX26_01008at 1061.630 kb on + strand, within MPMX26_01008at 1061.645 kb on + strand, within MPMX26_01008at 1061.669 kb on + strand, within MPMX26_01008at 1061.688 kb on + strand, within MPMX26_01008at 1061.732 kb on + strand, within MPMX26_01008at 1061.773 kb on + strand, within MPMX26_01008at 1061.773 kb on + strand, within MPMX26_01008at 1061.773 kb on + strand, within MPMX26_01008at 1061.773 kb on + strand, within MPMX26_01008at 1061.795 kb on + strand, within MPMX26_01008at 1061.814 kb on + strand, within MPMX26_01008at 1061.827 kb on + strand, within MPMX26_01008at 1061.827 kb on + strand, within MPMX26_01008at 1061.827 kb on + strand, within MPMX26_01008at 1061.846 kb on + strand, within MPMX26_01008at 1061.846 kb on + strand, within MPMX26_01008at 1061.846 kb on + strand, within MPMX26_01008at 1061.846 kb on + strand, within MPMX26_01008at 1061.846 kb on + strand, within MPMX26_01008at 1061.846 kb on + strand, within MPMX26_01008at 1061.854 kb on - strand, within MPMX26_01008at 1061.887 kb on + strand, within MPMX26_01008at 1061.892 kb on + strand, within MPMX26_01008at 1061.892 kb on + strand, within MPMX26_01008at 1061.914 kb on + strand, within MPMX26_01008at 1061.914 kb on + strand, within MPMX26_01008at 1061.932 kb on + strand, within MPMX26_01008at 1061.932 kb on + strand, within MPMX26_01008at 1061.934 kb on + strand, within MPMX26_01008at 1061.934 kb on + strand, within MPMX26_01008at 1061.934 kb on + strand, within MPMX26_01008at 1061.934 kb on + strand, within MPMX26_01008at 1061.934 kb on + strand, within MPMX26_01008at 1061.934 kb on + strand, within MPMX26_01008at 1061.934 kb on + strand, within MPMX26_01008at 1061.934 kb on + strand, within MPMX26_01008at 1061.934 kb on + strand, within MPMX26_01008at 1061.934 kb on + strand, within MPMX26_01008at 1061.934 kb on + strand, within MPMX26_01008at 1061.942 kb on + strand, within MPMX26_01008at 1061.942 kb on - strand, within MPMX26_01008at 1061.944 kb on + strand, within MPMX26_01008at 1061.944 kb on + strand, within MPMX26_01008at 1061.944 kb on + strand, within MPMX26_01008at 1061.944 kb on + strand, within MPMX26_01008at 1061.944 kb on + strand, within MPMX26_01008at 1061.944 kb on + strand, within MPMX26_01008

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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1,059,399 - -0.0
1,059,650 - +0.2
1,059,671 - -0.1
1,059,716 - -0.1
1,059,779 - MPMX26_01007 0.11 +0.2
1,059,805 - MPMX26_01007 0.13 +0.3
1,059,805 - MPMX26_01007 0.13 +1.0
1,059,805 - MPMX26_01007 0.13 -0.2
1,059,805 - MPMX26_01007 0.13 -0.3
1,059,805 - MPMX26_01007 0.13 -0.0
1,059,815 - MPMX26_01007 0.13 -0.9
1,059,845 - MPMX26_01007 0.16 -0.2
1,059,848 - MPMX26_01007 0.16 -0.4
1,059,855 - MPMX26_01007 0.17 +2.1
1,059,872 - MPMX26_01007 0.18 -0.2
1,059,884 - MPMX26_01007 0.19 -0.7
1,059,895 - MPMX26_01007 0.20 +0.2
1,059,895 - MPMX26_01007 0.20 -0.1
1,059,903 - MPMX26_01007 0.20 -1.8
1,059,923 - MPMX26_01007 0.22 +2.1
1,059,923 - MPMX26_01007 0.22 +0.6
1,059,932 - MPMX26_01007 0.22 -0.3
1,059,939 - MPMX26_01007 0.23 -0.0
1,059,939 - MPMX26_01007 0.23 -0.5
1,059,951 - MPMX26_01007 0.24 -0.4
1,059,951 - MPMX26_01007 0.24 +1.5
1,059,951 - MPMX26_01007 0.24 +1.1
1,059,951 - MPMX26_01007 0.24 -1.1
1,059,951 - MPMX26_01007 0.24 +0.1
1,059,951 - MPMX26_01007 0.24 +0.3
1,060,144 - MPMX26_01007 0.39 +0.0
1,060,172 - MPMX26_01007 0.41 -0.5
1,060,177 - MPMX26_01007 0.41 -1.2
1,060,256 - MPMX26_01007 0.47 +0.2
1,060,256 - MPMX26_01007 0.47 +0.2
1,060,258 - MPMX26_01007 0.47 +0.2
1,060,258 - MPMX26_01007 0.47 +0.0
1,060,258 - MPMX26_01007 0.47 +1.2
1,060,258 - MPMX26_01007 0.47 -2.1
1,060,258 - MPMX26_01007 0.47 -1.0
1,060,258 - MPMX26_01007 0.47 -0.2
1,060,258 - MPMX26_01007 0.47 -0.4
1,060,258 - MPMX26_01007 0.47 +0.7
1,060,258 - MPMX26_01007 0.47 +0.1
1,060,258 - MPMX26_01007 0.47 +0.3
1,060,258 - MPMX26_01007 0.47 +0.9
1,060,264 - MPMX26_01007 0.48 +0.8
1,060,356 - MPMX26_01007 0.55 +0.4
1,060,363 - MPMX26_01007 0.55 -0.8
1,060,399 - MPMX26_01007 0.58 -0.1
1,060,412 - MPMX26_01007 0.59 -0.5
1,060,425 - MPMX26_01007 0.60 -0.7
1,060,442 - MPMX26_01007 0.61 -0.7
1,060,566 - MPMX26_01007 0.71 +1.0
1,060,566 - MPMX26_01007 0.71 +0.4
1,060,568 - MPMX26_01007 0.71 +0.2
1,060,568 - MPMX26_01007 0.71 -0.1
1,060,568 - MPMX26_01007 0.71 +0.4
1,060,568 - MPMX26_01007 0.71 +0.5
1,060,568 - MPMX26_01007 0.71 -0.3
1,060,568 - MPMX26_01007 0.71 -0.1
1,060,568 - MPMX26_01007 0.71 +0.4
1,060,613 - MPMX26_01007 0.74 +0.5
1,060,613 - MPMX26_01007 0.74 +1.0
1,060,613 - MPMX26_01007 0.74 +0.3
1,060,628 - MPMX26_01007 0.75 +1.0
1,060,628 - MPMX26_01007 0.75 -0.2
1,060,647 - MPMX26_01007 0.77 +2.4
1,060,648 - MPMX26_01007 0.77 +0.1
1,060,754 - MPMX26_01007 0.85 +0.2
1,060,777 - MPMX26_01007 0.87 +1.2
1,060,787 - MPMX26_01007 0.87 -0.1
1,060,787 - MPMX26_01007 0.87 -0.4
1,060,787 - MPMX26_01007 0.87 +0.0
1,060,787 - MPMX26_01007 0.87 -0.3
1,060,792 - MPMX26_01007 0.88 +0.3
1,060,792 - MPMX26_01007 0.88 +0.5
1,060,792 - MPMX26_01007 0.88 +0.5
1,060,795 - MPMX26_01007 0.88 -0.7
1,060,797 - MPMX26_01007 0.88 +0.5
1,060,849 - -0.2
1,060,849 - -0.7
1,060,849 - +0.7
1,060,862 - +0.6
1,060,871 - -0.6
1,060,883 - +0.9
1,060,883 - -0.1
1,060,898 - -0.5
1,060,898 - +0.1
1,060,898 - -0.9
1,060,898 - +0.1
1,060,908 - -1.2
1,060,908 - +0.1
1,060,908 - +0.0
1,060,908 - -0.5
1,060,908 - +0.6
1,060,908 - -0.2
1,060,913 - +0.8
1,060,918 - -1.2
1,061,132 + +0.0
1,061,171 + -0.8
1,061,186 + -0.2
1,061,200 + +0.5
1,061,205 + -0.0
1,061,216 + -0.8
1,061,221 + -1.6
1,061,230 + +0.1
1,061,275 + +1.8
1,061,291 + +0.6
1,061,296 + -0.4
1,061,353 + MPMX26_01008 0.13 -0.4
1,061,353 + MPMX26_01008 0.13 +0.2
1,061,353 + MPMX26_01008 0.13 +1.2
1,061,353 + MPMX26_01008 0.13 -1.3
1,061,353 + MPMX26_01008 0.13 +0.6
1,061,353 + MPMX26_01008 0.13 -0.5
1,061,353 + MPMX26_01008 0.13 -0.5
1,061,379 + MPMX26_01008 0.14 +0.3
1,061,381 + MPMX26_01008 0.15 -0.4
1,061,393 + MPMX26_01008 0.15 +0.7
1,061,393 + MPMX26_01008 0.15 +0.2
1,061,393 + MPMX26_01008 0.15 +0.5
1,061,393 + MPMX26_01008 0.15 -0.9
1,061,393 + MPMX26_01008 0.15 -0.6
1,061,393 + MPMX26_01008 0.15 +0.3
1,061,400 + MPMX26_01008 0.16 +0.6
1,061,400 + MPMX26_01008 0.16 +1.0
1,061,404 + MPMX26_01008 0.16 +0.3
1,061,423 + MPMX26_01008 0.17 +0.0
1,061,432 + MPMX26_01008 0.18 +2.4
1,061,463 + MPMX26_01008 0.19 -0.8
1,061,463 + MPMX26_01008 0.19 +0.2
1,061,463 + MPMX26_01008 0.19 +0.2
1,061,463 + MPMX26_01008 0.19 +0.2
1,061,469 + MPMX26_01008 0.20 +0.5
1,061,474 + MPMX26_01008 0.20 -0.2
1,061,474 + MPMX26_01008 0.20 +0.2
1,061,505 + MPMX26_01008 0.22 +0.3
1,061,555 + MPMX26_01008 0.25 -0.1
1,061,555 + MPMX26_01008 0.25 -0.4
1,061,563 + MPMX26_01008 0.25 +0.8
1,061,592 + MPMX26_01008 0.27 +0.3
1,061,615 + MPMX26_01008 0.28 +0.2
1,061,630 + MPMX26_01008 0.29 +0.0
1,061,630 + MPMX26_01008 0.29 -0.2
1,061,645 + MPMX26_01008 0.30 +0.6
1,061,669 + MPMX26_01008 0.32 +1.8
1,061,688 + MPMX26_01008 0.33 +0.8
1,061,732 + MPMX26_01008 0.35 +0.3
1,061,773 + MPMX26_01008 0.38 +0.6
1,061,773 + MPMX26_01008 0.38 -0.6
1,061,773 + MPMX26_01008 0.38 +0.7
1,061,773 + MPMX26_01008 0.38 -1.4
1,061,795 + MPMX26_01008 0.39 -1.5
1,061,814 + MPMX26_01008 0.40 +0.8
1,061,827 + MPMX26_01008 0.41 +1.4
1,061,827 + MPMX26_01008 0.41 -0.1
1,061,827 + MPMX26_01008 0.41 -0.1
1,061,846 + MPMX26_01008 0.42 -0.5
1,061,846 + MPMX26_01008 0.42 -1.0
1,061,846 + MPMX26_01008 0.42 +0.8
1,061,846 + MPMX26_01008 0.42 -1.4
1,061,846 + MPMX26_01008 0.42 -0.1
1,061,846 + MPMX26_01008 0.42 -0.2
1,061,854 - MPMX26_01008 0.42 -2.2
1,061,887 + MPMX26_01008 0.44 -0.2
1,061,892 + MPMX26_01008 0.45 +1.0
1,061,892 + MPMX26_01008 0.45 +0.6
1,061,914 + MPMX26_01008 0.46 -0.3
1,061,914 + MPMX26_01008 0.46 -0.2
1,061,932 + MPMX26_01008 0.47 +0.9
1,061,932 + MPMX26_01008 0.47 -0.9
1,061,934 + MPMX26_01008 0.47 -0.4
1,061,934 + MPMX26_01008 0.47 -0.8
1,061,934 + MPMX26_01008 0.47 -0.0
1,061,934 + MPMX26_01008 0.47 -3.0
1,061,934 + MPMX26_01008 0.47 +0.2
1,061,934 + MPMX26_01008 0.47 -0.9
1,061,934 + MPMX26_01008 0.47 +0.2
1,061,934 + MPMX26_01008 0.47 +0.3
1,061,934 + MPMX26_01008 0.47 +1.3
1,061,934 + MPMX26_01008 0.47 +0.6
1,061,934 + MPMX26_01008 0.47 -1.5
1,061,942 + MPMX26_01008 0.48 -1.3
1,061,942 - MPMX26_01008 0.48 +1.5
1,061,944 + MPMX26_01008 0.48 +0.5
1,061,944 + MPMX26_01008 0.48 -0.2
1,061,944 + MPMX26_01008 0.48 -0.5
1,061,944 + MPMX26_01008 0.48 +0.0
1,061,944 + MPMX26_01008 0.48 -0.7
1,061,944 + MPMX26_01008 0.48 -0.8

Or see this region's nucleotide sequence